RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RRBP1Q9P2E9 1410 aaKnown RBP33.46■■■□□ 2.95
PDLIM3-203ENST00000284771 ZNF644Q9H582 1327 aaPredicted RBP33.45■■■□□ 2.95
PDLIM3-203ENST00000284771 ARHGAP5Q13017 1502 aa33.42■■■□□ 2.94
PDLIM3-203ENST00000284771 ARAP3Q8WWN8 1544 aa33.42■■■□□ 2.94
PDLIM3-203ENST00000284771 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
PDLIM3-203ENST00000284771 ZNF777Q9ULD5 760 aaPredicted RBP33.41■■■□□ 2.94
PDLIM3-203ENST00000284771 PTPN23Q9H3S7 1636 aa33.39■■■□□ 2.94
PDLIM3-203ENST00000284771 EFCAB2Q5VUJ9 269 aa33.38■■■□□ 2.93
PDLIM3-203ENST00000284771 TSPOAP1O95153 1857 aa33.38■■■□□ 2.93
PDLIM3-203ENST00000284771 PPRC1Q5VV67 1664 aaKnown RBP33.37■■■□□ 2.93
PDLIM3-203ENST00000284771 FANCAO15360 1455 aa33.37■■■□□ 2.93
PDLIM3-203ENST00000284771 TCOF1Q13428 1488 aaKnown RBP33.35■■■□□ 2.93
PDLIM3-203ENST00000284771 SAMD9LQ8IVG5 1584 aa33.35■■■□□ 2.93
PDLIM3-203ENST00000284771 FAM50AQ14320 339 aaKnown RBP33.34■■■□□ 2.93
PDLIM3-203ENST00000284771 CAMSAP2Q08AD1 1489 aa33.33■■■□□ 2.93
PDLIM3-203ENST00000284771 TRIM26Q12899 539 aaPredicted RBP33.31■■■□□ 2.92
PDLIM3-203ENST00000284771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.29■■■□□ 2.92
PDLIM3-203ENST00000284771 AKNAQ7Z591 1439 aa33.27■■■□□ 2.92
PDLIM3-203ENST00000284771 ARHGEF12Q9NZN5 1544 aa33.26■■■□□ 2.91
PDLIM3-203ENST00000284771 HNRNPMP52272 730 aaKnown RBP eCLIP33.25■■■□□ 2.91
PDLIM3-203ENST00000284771 NEO1Q92859 1461 aa33.24■■■□□ 2.91
PDLIM3-203ENST00000284771 MBD5Q9P267 1494 aa33.23■■■□□ 2.91
PDLIM3-203ENST00000284771 ABCC1P33527 1531 aa33.22■■■□□ 2.91
PDLIM3-203ENST00000284771 KIAA1107Q9UPP5 1409 aa33.22■■■□□ 2.91
PDLIM3-203ENST00000284771 TEX14Q8IWB6 1497 aa33.21■■■□□ 2.91
PDLIM3-203ENST00000284771 SYCP2Q9BX26 1530 aa33.21■■■□□ 2.91
PDLIM3-203ENST00000284771 CFAP74Q9C0B2 1584 aa33.2■■■□□ 2.91
PDLIM3-203ENST00000284771 ADGRL1O94910 1474 aa33.2■■■□□ 2.9
PDLIM3-203ENST00000284771 PLEKHH2Q8IVE3 1493 aa33.18■■■□□ 2.9
PDLIM3-203ENST00000284771 SCAPERQ9BY12 1400 aa33.17■■■□□ 2.9
PDLIM3-203ENST00000284771 ITGAEP38570 1179 aa33.17■■■□□ 2.9
PDLIM3-203ENST00000284771 ABCC5O15440 1437 aa33.15■■■□□ 2.9
PDLIM3-203ENST00000284771 PTPRKQ15262 1439 aa33.15■■■□□ 2.9
PDLIM3-203ENST00000284771 TRAPPC8Q9Y2L5 1435 aa33.14■■■□□ 2.9
PDLIM3-203ENST00000284771 DNMT1P26358 1616 aaKnown RBP33.13■■■□□ 2.89
PDLIM3-203ENST00000284771 DAPK1P53355 1430 aa33.12■■■□□ 2.89
PDLIM3-203ENST00000284771 ARHGEF5Q12774 1597 aa33.11■■■□□ 2.89
PDLIM3-203ENST00000284771 AFAP1Q8N556 730 aa33.11■■■□□ 2.89
PDLIM3-203ENST00000284771 PCGF6Q9BYE7 350 aa33.09■■■□□ 2.89
PDLIM3-203ENST00000284771 RSPH4AQ5TD94 716 aa33.08■■■□□ 2.89
PDLIM3-203ENST00000284771 COL17A1Q9UMD9 1497 aaPredicted RBP33.08■■■□□ 2.89
PDLIM3-203ENST00000284771 CCDC141Q6ZP82 1450 aa33.07■■■□□ 2.88
PDLIM3-203ENST00000284771 RAPGEF3O95398 923 aa33.07■■■□□ 2.88
PDLIM3-203ENST00000284771 DENND4BO75064 1496 aaPredicted RBP33.04■■■□□ 2.88
PDLIM3-203ENST00000284771 POGZQ7Z3K3 1410 aa33.03■■■□□ 2.88
PDLIM3-203ENST00000284771 CHIC2Q9UKJ5 165 aa33.03■■■□□ 2.88
PDLIM3-203ENST00000284771 CROCC2H7BZ55 1655 aa33.02■■■□□ 2.88
PDLIM3-203ENST00000284771 RICTORQ6R327 1708 aa32.99■■■□□ 2.87
PDLIM3-203ENST00000284771 ZNF518AQ6AHZ1 1483 aa32.99■■■□□ 2.87
PDLIM3-203ENST00000284771 TSPY4P0CV99 314 aa32.99■■■□□ 2.87
PDLIM3-203ENST00000284771 TSPY10P0CW01 314 aa32.99■■■□□ 2.87
PDLIM3-203ENST00000284771 FRMPD1Q5SYB0 1578 aa32.97■■■□□ 2.87
PDLIM3-203ENST00000284771 C9orf84Q5VXU9 1444 aa32.96■■■□□ 2.87
PDLIM3-203ENST00000284771 SHANK2Q9UPX8 1470 aa32.96■■■□□ 2.87
PDLIM3-203ENST00000284771 KDM5CP41229 1560 aa32.95■■■□□ 2.87
PDLIM3-203ENST00000284771 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
PDLIM3-203ENST00000284771 SPAG9O60271 1321 aaKnown RBP32.92■■■□□ 2.86
PDLIM3-203ENST00000284771 NCOA1Q15788 1441 aa32.9■■■□□ 2.86
PDLIM3-203ENST00000284771 RRP7BPQ9NSQ0 103 aa32.88■■■□□ 2.85
PDLIM3-203ENST00000284771 ADGRL2O95490 1459 aa32.88■■■□□ 2.85
PDLIM3-203ENST00000284771 RTEL1-TNFRSF6BF6WH68 1400 aa32.88■■■□□ 2.85
PDLIM3-203ENST00000284771 ROCK1Q13464 1354 aa32.87■■■□□ 2.85
PDLIM3-203ENST00000284771 ZFYVE16Q7Z3T8 1539 aa32.87■■■□□ 2.85
PDLIM3-203ENST00000284771 INO80Q9ULG1 1556 aaPredicted RBP32.87■■■□□ 2.85
PDLIM3-203ENST00000284771 KIDINS220Q9ULH0 1771 aa32.86■■■□□ 2.85
PDLIM3-203ENST00000284771 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
PDLIM3-203ENST00000284771 ADGBQ8N7X0 1667 aa32.85■■■□□ 2.85
PDLIM3-203ENST00000284771 ATP7AQ04656 1500 aa32.85■■■□□ 2.85
PDLIM3-203ENST00000284771 KDM6BO15054 1643 aa32.84■■■□□ 2.85
PDLIM3-203ENST00000284771 ANKRD30AQ9BXX3 1397 aa32.83■■■□□ 2.85
PDLIM3-203ENST00000284771 ZMYM4Q5VZL5 1548 aa32.83■■■□□ 2.85
PDLIM3-203ENST00000284771 HECW2Q9P2P5 1572 aa32.83■■■□□ 2.85
PDLIM3-203ENST00000284771 NAIPQ13075 1403 aa32.8■■■□□ 2.84
PDLIM3-203ENST00000284771 MYT1LQ9UL68 1186 aa32.8■■■□□ 2.84
PDLIM3-203ENST00000284771 HFM1A2PYH4 1435 aa32.79■■■□□ 2.84
PDLIM3-203ENST00000284771 PLXNC1O60486 1568 aa32.78■■■□□ 2.84
PDLIM3-203ENST00000284771 YEATS2Q9ULM3 1422 aa32.77■■■□□ 2.84
PDLIM3-203ENST00000284771 KIF15Q9NS87 1388 aa32.76■■■□□ 2.83
PDLIM3-203ENST00000284771 MAGI2Q86UL8 1455 aa32.73■■■□□ 2.83
PDLIM3-203ENST00000284771 ABCA6Q8N139 1617 aa32.73■■■□□ 2.83
PDLIM3-203ENST00000284771 SETD5Q9C0A6 1442 aa32.71■■■□□ 2.83
PDLIM3-203ENST00000284771 GCC2Q8IWJ2 1684 aa32.7■■■□□ 2.83
PDLIM3-203ENST00000284771 DIP2CQ9Y2E4 1556 aa32.7■■■□□ 2.82
PDLIM3-203ENST00000284771 ANKRD50Q9ULJ7 1429 aa32.66■■■□□ 2.82
PDLIM3-203ENST00000284771 DUOX2Q9NRD8 1548 aa32.65■■■□□ 2.82
PDLIM3-203ENST00000284771 RAB3GAP2Q9H2M9 1393 aa32.65■■■□□ 2.82
PDLIM3-203ENST00000284771 DHX29Q7Z478 1369 aaKnown RBP32.64■■■□□ 2.82
PDLIM3-203ENST00000284771 A2MP01023 1474 aa32.62■■■□□ 2.81
PDLIM3-203ENST00000284771 ARHGEF40Q8TER5 1519 aa32.6■■■□□ 2.81
PDLIM3-203ENST00000284771 ATP10AO60312 1499 aa32.6■■■□□ 2.81
PDLIM3-203ENST00000284771 ERBINQ96RT1 1412 aa32.58■■■□□ 2.81
PDLIM3-203ENST00000284771 SIGLEC1Q9BZZ2 1709 aa32.54■■■□□ 2.8
PDLIM3-203ENST00000284771 HRCP23327 699 aa32.53■■■□□ 2.8
PDLIM3-203ENST00000284771 REREQ9P2R6 1566 aa32.51■■■□□ 2.8
PDLIM3-203ENST00000284771 KIF3BO15066 747 aa32.5■■■□□ 2.79
PDLIM3-203ENST00000284771 EIF2AK4Q9P2K8 1649 aaKnown RBP32.47■■■□□ 2.79
PDLIM3-203ENST00000284771 BCORL1Q5H9F3 1711 aa32.43■■■□□ 2.78
PDLIM3-203ENST00000284771 AGLP35573 1532 aa32.42■■■□□ 2.78
PDLIM3-203ENST00000284771 TRIM52Q96A61 297 aa32.4■■■□□ 2.78
PDLIM3-203ENST00000284771 DEPDC5O75140 1603 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms