RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 ARAP3Q8WWN8 1544 aa36.96■■■■□ 3.51
CTF1-201ENST00000279804 ITSN2Q9NZM3 1697 aa36.95■■■■□ 3.51
CTF1-201ENST00000279804 KDM6BO15054 1643 aa36.93■■■■□ 3.5
CTF1-201ENST00000279804 NEO1Q92859 1461 aa36.93■■■■□ 3.5
CTF1-201ENST00000279804 PPARGC1BQ86YN6 1023 aaKnown RBP36.93■■■■□ 3.5
CTF1-201ENST00000279804 COL17A1Q9UMD9 1497 aaPredicted RBP36.87■■■■□ 3.49
CTF1-201ENST00000279804 AKNAQ7Z591 1439 aa36.87■■■■□ 3.49
CTF1-201ENST00000279804 EFCAB2Q5VUJ9 269 aa36.86■■■■□ 3.49
CTF1-201ENST00000279804 SAMD9LQ8IVG5 1584 aa36.81■■■■□ 3.48
CTF1-201ENST00000279804 CFDP1Q9UEE9 299 aaPredicted RBP36.8■■■■□ 3.48
CTF1-201ENST00000279804 ZNF777Q9ULD5 760 aaPredicted RBP36.8■■■■□ 3.48
CTF1-201ENST00000279804 PHLDB1Q86UU1 1377 aa36.8■■■■□ 3.48
CTF1-201ENST00000279804 ADGRL1O94910 1474 aa36.79■■■■□ 3.48
CTF1-201ENST00000279804 MYOM3Q5VTT5 1437 aa36.76■■■■□ 3.47
CTF1-201ENST00000279804 ABCC1P33527 1531 aa36.74■■■■□ 3.47
CTF1-201ENST00000279804 RICTORQ6R327 1708 aa36.74■■■■□ 3.47
CTF1-201ENST00000279804 SCAPERQ9BY12 1400 aa36.72■■■■□ 3.47
CTF1-201ENST00000279804 FRMPD1Q5SYB0 1578 aa36.72■■■■□ 3.47
CTF1-201ENST00000279804 ZNF644Q9H582 1327 aaPredicted RBP36.71■■■■□ 3.47
CTF1-201ENST00000279804 RAPGEF3O95398 923 aa36.7■■■■□ 3.47
CTF1-201ENST00000279804 ARHGEF12Q9NZN5 1544 aa36.7■■■■□ 3.46
CTF1-201ENST00000279804 DENND4BO75064 1496 aaPredicted RBP36.69■■■■□ 3.46
CTF1-201ENST00000279804 SYCP2Q9BX26 1530 aa36.68■■■■□ 3.46
CTF1-201ENST00000279804 CAMSAP2Q08AD1 1489 aa36.66■■■■□ 3.46
CTF1-201ENST00000279804 POGZQ7Z3K3 1410 aa36.62■■■■□ 3.45
CTF1-201ENST00000279804 MIA2Q96PC5 1412 aa36.62■■■■□ 3.45
CTF1-201ENST00000279804 PTPN23Q9H3S7 1636 aa36.61■■■■□ 3.45
CTF1-201ENST00000279804 FGD6Q6ZV73 1430 aa36.6■■■■□ 3.45
CTF1-201ENST00000279804 HNRNPMP52272 730 aaKnown RBP eCLIP36.6■■■■□ 3.45
CTF1-201ENST00000279804 PLEKHH2Q8IVE3 1493 aa36.59■■■■□ 3.45
CTF1-201ENST00000279804 TRAPPC8Q9Y2L5 1435 aa36.59■■■■□ 3.45
CTF1-201ENST00000279804 KIAA1107Q9UPP5 1409 aa36.56■■■■□ 3.44
CTF1-201ENST00000279804 AFAP1Q8N556 730 aa36.55■■■■□ 3.44
CTF1-201ENST00000279804 ZNF518AQ6AHZ1 1483 aa36.55■■■■□ 3.44
CTF1-201ENST00000279804 KDM5CP41229 1560 aa36.52■■■■□ 3.44
CTF1-201ENST00000279804 MBD5Q9P267 1494 aa36.52■■■■□ 3.44
CTF1-201ENST00000279804 ZMYM4Q5VZL5 1548 aa36.52■■■■□ 3.44
CTF1-201ENST00000279804 TCOF1Q13428 1488 aaKnown RBP36.48■■■■□ 3.43
CTF1-201ENST00000279804 ARHGEF5Q12774 1597 aa36.45■■■■□ 3.43
CTF1-201ENST00000279804 HECW2Q9P2P5 1572 aa36.45■■■■□ 3.43
CTF1-201ENST00000279804 KIDINS220Q9ULH0 1771 aa36.42■■■■□ 3.42
CTF1-201ENST00000279804 CCDC141Q6ZP82 1450 aa36.41■■■■□ 3.42
CTF1-201ENST00000279804 YEATS2Q9ULM3 1422 aa36.4■■■■□ 3.42
CTF1-201ENST00000279804 FAM50AQ14320 339 aaKnown RBP36.39■■■■□ 3.42
CTF1-201ENST00000279804 ZFYVE16Q7Z3T8 1539 aa36.39■■■■□ 3.42
CTF1-201ENST00000279804 ARHGEF40Q8TER5 1519 aa36.38■■■■□ 3.41
CTF1-201ENST00000279804 CROCC2H7BZ55 1655 aa36.38■■■■□ 3.41
CTF1-201ENST00000279804 INO80Q9ULG1 1556 aaPredicted RBP36.37■■■■□ 3.41
CTF1-201ENST00000279804 DNMT1P26358 1616 aaKnown RBP36.37■■■■□ 3.41
CTF1-201ENST00000279804 MYT1LQ9UL68 1186 aa36.36■■■■□ 3.41
CTF1-201ENST00000279804 MAGI2Q86UL8 1455 aa36.36■■■■□ 3.41
CTF1-201ENST00000279804 MLH3Q9UHC1 1453 aa36.36■■■■□ 3.41
CTF1-201ENST00000279804 ABCA6Q8N139 1617 aa36.34■■■■□ 3.41
CTF1-201ENST00000279804 ATP7AQ04656 1500 aa36.34■■■■□ 3.41
CTF1-201ENST00000279804 SPAG9O60271 1321 aaKnown RBP36.34■■■■□ 3.41
CTF1-201ENST00000279804 RSPH4AQ5TD94 716 aa36.31■■■■□ 3.4
CTF1-201ENST00000279804 RRBP1Q9P2E9 1410 aaKnown RBP36.31■■■■□ 3.4
CTF1-201ENST00000279804 DIP2CQ9Y2E4 1556 aa36.31■■■■□ 3.4
CTF1-201ENST00000279804 ABCC5O15440 1437 aa36.29■■■■□ 3.4
CTF1-201ENST00000279804 DAPK1P53355 1430 aa36.29■■■■□ 3.4
CTF1-201ENST00000279804 SIGLEC1Q9BZZ2 1709 aa36.27■■■■□ 3.4
CTF1-201ENST00000279804 MAST1Q9Y2H9 1570 aa36.25■■■■□ 3.39
CTF1-201ENST00000279804 TSPY4P0CV99 314 aa36.23■■■■□ 3.39
CTF1-201ENST00000279804 TSPY10P0CW01 314 aa36.23■■■■□ 3.39
CTF1-201ENST00000279804 ADGBQ8N7X0 1667 aa36.23■■■■□ 3.39
CTF1-201ENST00000279804 C9orf84Q5VXU9 1444 aa36.22■■■■□ 3.39
CTF1-201ENST00000279804 RTEL1-TNFRSF6BF6WH68 1400 aa36.21■■■■□ 3.39
CTF1-201ENST00000279804 ATP10AO60312 1499 aa36.21■■■■□ 3.39
CTF1-201ENST00000279804 SHANK2Q9UPX8 1470 aa36.19■■■■□ 3.38
CTF1-201ENST00000279804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.18■■■■□ 3.38
CTF1-201ENST00000279804 ITGAEP38570 1179 aa36.15■■■■□ 3.38
CTF1-201ENST00000279804 CHIC2Q9UKJ5 165 aa36.15■■■■□ 3.38
CTF1-201ENST00000279804 PTPRKQ15262 1439 aa36.14■■■■□ 3.38
CTF1-201ENST00000279804 PLXNC1O60486 1568 aa36.13■■■■□ 3.37
CTF1-201ENST00000279804 REREQ9P2R6 1566 aa36.11■■■■□ 3.37
CTF1-201ENST00000279804 A2MP01023 1474 aa36.07■■■■□ 3.36
CTF1-201ENST00000279804 ARID4BQ4LE39 1312 aaPredicted RBP36.06■■■■□ 3.36
CTF1-201ENST00000279804 ADGRL2O95490 1459 aa36.02■■■■□ 3.36
CTF1-201ENST00000279804 RRP7BPQ9NSQ0 103 aa36.01■■■■□ 3.36
CTF1-201ENST00000279804 BCORL1Q5H9F3 1711 aa36.01■■■■□ 3.35
CTF1-201ENST00000279804 NCOA1Q15788 1441 aa35.99■■■■□ 3.35
CTF1-201ENST00000279804 ANKRD30AQ9BXX3 1397 aa35.99■■■■□ 3.35
CTF1-201ENST00000279804 KIF15Q9NS87 1388 aa35.98■■■■□ 3.35
CTF1-201ENST00000279804 DHX29Q7Z478 1369 aaKnown RBP35.98■■■■□ 3.35
CTF1-201ENST00000279804 AGLP35573 1532 aa35.98■■■■□ 3.35
CTF1-201ENST00000279804 DUOX2Q9NRD8 1548 aa35.95■■■■□ 3.35
CTF1-201ENST00000279804 TRIM26Q12899 539 aaPredicted RBP35.94■■■■□ 3.34
CTF1-201ENST00000279804 MLECQ14165 292 aa35.94■■■■□ 3.34
CTF1-201ENST00000279804 ADAMTSL3P82987 1691 aa35.89■■■■□ 3.34
CTF1-201ENST00000279804 ROCK1Q13464 1354 aa35.89■■■■□ 3.34
CTF1-201ENST00000279804 EIF2AK4Q9P2K8 1649 aaKnown RBP35.88■■■■□ 3.33
CTF1-201ENST00000279804 MADDQ8WXG6 1647 aa35.86■■■■□ 3.33
CTF1-201ENST00000279804 FER1L4A9Z1Z3 1794 aa35.86■■■■□ 3.33
CTF1-201ENST00000279804 KDM4FA0A1W2PPD8 638 aa35.84■■■■□ 3.33
CTF1-201ENST00000279804 KIF3BO15066 747 aa35.84■■■■□ 3.33
CTF1-201ENST00000279804 ERBINQ96RT1 1412 aa35.83■■■■□ 3.33
CTF1-201ENST00000279804 GCC2Q8IWJ2 1684 aa35.8■■■■□ 3.32
CTF1-201ENST00000279804 GGT6Q6P531 493 aa35.79■■■■□ 3.32
CTF1-201ENST00000279804 RIMS1Q86UR5 1692 aaKnown RBP35.79■■■■□ 3.32
CTF1-201ENST00000279804 RNF17Q9BXT8 1623 aaKnown RBP35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms