RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 B4GALNT3Q6L9W6 998 aa26■■□□□ 1.75
CACNA1B-201ENST00000277549 ANP32EQ9BTT0 268 aa25.99■■□□□ 1.75
CACNA1B-201ENST00000277549 KIAA2012Q0VF49 1180 aa25.99■■□□□ 1.75
CACNA1B-201ENST00000277549 TAF7LQ5H9L4 462 aa25.98■■□□□ 1.75
CACNA1B-201ENST00000277549 GORABQ5T7V8 394 aa25.97■■□□□ 1.75
CACNA1B-201ENST00000277549 NUTM2FA1L443 756 aa25.97■■□□□ 1.75
CACNA1B-201ENST00000277549 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
CACNA1B-201ENST00000277549 MORC1Q86VD1 984 aa25.96■■□□□ 1.75
CACNA1B-201ENST00000277549 NRDCO43847 1150 aa25.94■■□□□ 1.74
CACNA1B-201ENST00000277549 SIN3AQ96ST3 1273 aa25.94■■□□□ 1.74
CACNA1B-201ENST00000277549 HSCBQ8IWL3 235 aa25.93■■□□□ 1.74
CACNA1B-201ENST00000277549 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
CACNA1B-201ENST00000277549 RAD21O60216 631 aa25.92■■□□□ 1.74
CACNA1B-201ENST00000277549 MCCP23508 829 aa25.92■■□□□ 1.74
CACNA1B-201ENST00000277549 NOL8Q76FK4 1167 aaKnown RBP25.91■■□□□ 1.74
CACNA1B-201ENST00000277549 FRAT2O75474 233 aaPredicted RBP25.9■■□□□ 1.74
CACNA1B-201ENST00000277549 RASSF8Q8NHQ8 419 aa25.89■■□□□ 1.73
CACNA1B-201ENST00000277549 TOMM22Q9NS69 142 aa25.88■■□□□ 1.73
CACNA1B-201ENST00000277549 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
CACNA1B-201ENST00000277549 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
CACNA1B-201ENST00000277549 A0A0U1RQG5 324 aaPredicted RBP25.86■■□□□ 1.73
CACNA1B-201ENST00000277549 KIAA1211Q6ZU35 1233 aa25.85■■□□□ 1.73
CACNA1B-201ENST00000277549 GTF2E1P29083 439 aaPredicted RBP25.85■■□□□ 1.73
CACNA1B-201ENST00000277549 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
CACNA1B-201ENST00000277549 CHAF1AQ13111 956 aaPredicted RBP25.83■■□□□ 1.73
CACNA1B-201ENST00000277549 CLIP1P30622 1438 aa25.83■■□□□ 1.73
CACNA1B-201ENST00000277549 KANK1Q14678 1352 aa25.8■■□□□ 1.72
CACNA1B-201ENST00000277549 FBXW7Q969H0 707 aa25.8■■□□□ 1.72
CACNA1B-201ENST00000277549 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
CACNA1B-201ENST00000277549 TMF1P82094 1093 aa25.8■■□□□ 1.72
CACNA1B-201ENST00000277549 ITPRIPQ8IWB1 547 aa25.79■■□□□ 1.72
CACNA1B-201ENST00000277549 FOXD4L1Q9NU39 408 aa25.79■■□□□ 1.72
CACNA1B-201ENST00000277549 MARCH6O60337 910 aa25.78■■□□□ 1.72
CACNA1B-201ENST00000277549 GZF1Q9H116 711 aaPredicted RBP25.78■■□□□ 1.72
CACNA1B-201ENST00000277549 SLC4A10Q6U841 1118 aa25.78■■□□□ 1.72
CACNA1B-201ENST00000277549 CHMP4BQ9H444 224 aaKnown RBP25.77■■□□□ 1.72
CACNA1B-201ENST00000277549 MSNP26038 577 aaKnown RBP25.77■■□□□ 1.72
CACNA1B-201ENST00000277549 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.72
CACNA1B-201ENST00000277549 TRIM6-TRIM34B2RNG4 842 aa25.76■■□□□ 1.71
CACNA1B-201ENST00000277549 CNKSR2Q8WXI2 1034 aa25.75■■□□□ 1.71
CACNA1B-201ENST00000277549 FOXD1Q16676 465 aa25.75■■□□□ 1.71
CACNA1B-201ENST00000277549 SAMD1Q6SPF0 538 aaPredicted RBP25.74■■□□□ 1.71
CACNA1B-201ENST00000277549 FOXD4L5Q5VV16 416 aaPredicted RBP25.72■■□□□ 1.71
CACNA1B-201ENST00000277549 FOXD4L4Q8WXT5 416 aaPredicted RBP25.72■■□□□ 1.71
CACNA1B-201ENST00000277549 L1TD1Q5T7N2 865 aaKnown RBP25.72■■□□□ 1.71
CACNA1B-201ENST00000277549 MS4A1P11836 297 aa25.71■■□□□ 1.71
CACNA1B-201ENST00000277549 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
CACNA1B-201ENST00000277549 U2AF1L5P0DN76 240 aaPredicted RBP25.69■■□□□ 1.7
CACNA1B-201ENST00000277549 U2AF1Q01081 240 aaKnown RBP eCLIP25.69■■□□□ 1.7
CACNA1B-201ENST00000277549 PES1O00541 588 aaKnown RBP25.68■■□□□ 1.7
CACNA1B-201ENST00000277549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.67■■□□□ 1.7
CACNA1B-201ENST00000277549 NOP58Q9Y2X3 529 aaKnown RBP25.66■■□□□ 1.7
CACNA1B-201ENST00000277549 EVA1CP58658 441 aa25.65■■□□□ 1.7
CACNA1B-201ENST00000277549 NGDNQ8NEJ9 315 aaKnown RBP25.64■■□□□ 1.7
CACNA1B-201ENST00000277549 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
CACNA1B-201ENST00000277549 SYTL4Q96C24 671 aaPredicted RBP25.62■■□□□ 1.69
CACNA1B-201ENST00000277549 CWC22Q9HCG8 908 aaKnown RBP25.62■■□□□ 1.69
CACNA1B-201ENST00000277549 CCDC146Q8IYE0 955 aa25.6■■□□□ 1.69
CACNA1B-201ENST00000277549 CTDP1Q9Y5B0 961 aaPredicted RBP25.59■■□□□ 1.69
CACNA1B-201ENST00000277549 CEP89Q96ST8 783 aa25.59■■□□□ 1.69
CACNA1B-201ENST00000277549 SLKQ9H2G2 1235 aaPredicted RBP25.58■■□□□ 1.69
CACNA1B-201ENST00000277549 MFAP1P55081 439 aaKnown RBP25.58■■□□□ 1.69
CACNA1B-201ENST00000277549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.57■■□□□ 1.68
CACNA1B-201ENST00000277549 AMPHP49418 695 aa25.57■■□□□ 1.68
CACNA1B-201ENST00000277549 PPP4R2Q9NY27 417 aa25.57■■□□□ 1.68
CACNA1B-201ENST00000277549 TCEAL9Q9UHQ7 104 aa25.57■■□□□ 1.68
CACNA1B-201ENST00000277549 PATL2C9JE40 543 aaKnown RBP25.57■■□□□ 1.68
CACNA1B-201ENST00000277549 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
CACNA1B-201ENST00000277549 TRIM34Q9BYJ4 488 aa25.56■■□□□ 1.68
CACNA1B-201ENST00000277549 GPATCH3Q96I76 525 aa25.54■■□□□ 1.68
CACNA1B-201ENST00000277549 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
CACNA1B-201ENST00000277549 PPP1R1BQ9UD71 204 aaPredicted RBP25.53■■□□□ 1.68
CACNA1B-201ENST00000277549 FOXD4L6Q3SYB3 417 aaPredicted RBP25.52■■□□□ 1.68
CACNA1B-201ENST00000277549 FOXD4L3Q6VB84 417 aaPredicted RBP25.52■■□□□ 1.68
CACNA1B-201ENST00000277549 TPM4P67936 248 aa25.5■■□□□ 1.67
CACNA1B-201ENST00000277549 CLUAP1Q96AJ1 413 aa25.5■■□□□ 1.67
CACNA1B-201ENST00000277549 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
CACNA1B-201ENST00000277549 IPO8O15397 1037 aaKnown RBP25.46■■□□□ 1.67
CACNA1B-201ENST00000277549 NECTIN2Q92692 538 aa25.46■■□□□ 1.67
CACNA1B-201ENST00000277549 SMC4Q9NTJ3 1288 aa25.45■■□□□ 1.66
CACNA1B-201ENST00000277549 TPD52L1Q16890 204 aaPredicted RBP25.44■■□□□ 1.66
CACNA1B-201ENST00000277549 DHX16O60231 1041 aaKnown RBP25.43■■□□□ 1.66
CACNA1B-201ENST00000277549 PKD2Q13563 968 aa25.41■■□□□ 1.66
CACNA1B-201ENST00000277549 ELL2O00472 640 aaPredicted RBP25.4■■□□□ 1.66
CACNA1B-201ENST00000277549 ROCK2O75116 1388 aaKnown RBP25.4■■□□□ 1.66
CACNA1B-201ENST00000277549 RRP7AQ9Y3A4 280 aaKnown RBP25.39■■□□□ 1.66
CACNA1B-201ENST00000277549 HTATSF1O43719 755 aaKnown RBP25.39■■□□□ 1.66
CACNA1B-201ENST00000277549 RILPL2Q969X0 211 aa25.39■■□□□ 1.65
CACNA1B-201ENST00000277549 CEP162Q5TB80 1403 aa25.39■■□□□ 1.65
CACNA1B-201ENST00000277549 SF3A1Q15459 793 aaKnown RBP25.38■■□□□ 1.65
CACNA1B-201ENST00000277549 HSPA5P11021 654 aaKnown RBP25.37■■□□□ 1.65
CACNA1B-201ENST00000277549 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
CACNA1B-201ENST00000277549 CCAR2Q8N163 923 aaKnown RBP25.36■■□□□ 1.65
CACNA1B-201ENST00000277549 GOLGA6L1Q8N7Z2 621 aa25.36■■□□□ 1.65
CACNA1B-201ENST00000277549 EIF2S2P20042 333 aaKnown RBP25.35■■□□□ 1.65
CACNA1B-201ENST00000277549 KDM4AO75164 1064 aa25.35■■□□□ 1.65
CACNA1B-201ENST00000277549 MTMR7Q9Y216 660 aa25.35■■□□□ 1.65
CACNA1B-201ENST00000277549 KIF3BO15066 747 aa25.34■■□□□ 1.65
CACNA1B-201ENST00000277549 KTN1Q86UP2 1357 aaKnown RBP25.34■■□□□ 1.65
CACNA1B-201ENST00000277549 FYB1O15117 783 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms