RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
ATP6V1C2-201ENST00000272238 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
ATP6V1C2-201ENST00000272238 ARAP3Q8WWN8 1544 aa24.27■■□□□ 1.48
ATP6V1C2-201ENST00000272238 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
ATP6V1C2-201ENST00000272238 NEO1Q92859 1461 aa24.25■■□□□ 1.47
ATP6V1C2-201ENST00000272238 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
ATP6V1C2-201ENST00000272238 ADGRL1O94910 1474 aa24.2■■□□□ 1.47
ATP6V1C2-201ENST00000272238 AKNAQ7Z591 1439 aa24.2■■□□□ 1.46
ATP6V1C2-201ENST00000272238 ZNF777Q9ULD5 760 aaPredicted RBP24.2■■□□□ 1.46
ATP6V1C2-201ENST00000272238 COL17A1Q9UMD9 1497 aaPredicted RBP24.18■■□□□ 1.46
ATP6V1C2-201ENST00000272238 ABCC1P33527 1531 aa24.18■■□□□ 1.46
ATP6V1C2-201ENST00000272238 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
ATP6V1C2-201ENST00000272238 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
ATP6V1C2-201ENST00000272238 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
ATP6V1C2-201ENST00000272238 MYOM3Q5VTT5 1437 aa24.16■■□□□ 1.46
ATP6V1C2-201ENST00000272238 SYCP2Q9BX26 1530 aa24.15■■□□□ 1.46
ATP6V1C2-201ENST00000272238 RICTORQ6R327 1708 aa24.14■■□□□ 1.46
ATP6V1C2-201ENST00000272238 FRMPD1Q5SYB0 1578 aa24.14■■□□□ 1.46
ATP6V1C2-201ENST00000272238 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
ATP6V1C2-201ENST00000272238 SCAPERQ9BY12 1400 aa24.11■■□□□ 1.45
ATP6V1C2-201ENST00000272238 DENND4BO75064 1496 aaPredicted RBP24.1■■□□□ 1.45
ATP6V1C2-201ENST00000272238 PTPN23Q9H3S7 1636 aa24.09■■□□□ 1.45
ATP6V1C2-201ENST00000272238 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
ATP6V1C2-201ENST00000272238 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
ATP6V1C2-201ENST00000272238 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.45
ATP6V1C2-201ENST00000272238 RAPGEF3O95398 923 aa24.08■■□□□ 1.44
ATP6V1C2-201ENST00000272238 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
ATP6V1C2-201ENST00000272238 PLEKHH2Q8IVE3 1493 aa24.05■■□□□ 1.44
ATP6V1C2-201ENST00000272238 MIA2Q96PC5 1412 aa24.05■■□□□ 1.44
ATP6V1C2-201ENST00000272238 ZNF518AQ6AHZ1 1483 aa24.03■■□□□ 1.44
ATP6V1C2-201ENST00000272238 TRAPPC8Q9Y2L5 1435 aa24.03■■□□□ 1.44
ATP6V1C2-201ENST00000272238 KDM5CP41229 1560 aa24■■□□□ 1.43
ATP6V1C2-201ENST00000272238 HNRNPMP52272 730 aaKnown RBP eCLIP24■■□□□ 1.43
ATP6V1C2-201ENST00000272238 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
ATP6V1C2-201ENST00000272238 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
ATP6V1C2-201ENST00000272238 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
ATP6V1C2-201ENST00000272238 AFAP1Q8N556 730 aa23.97■■□□□ 1.43
ATP6V1C2-201ENST00000272238 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 MBD5Q9P267 1494 aa23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 ARHGEF5Q12774 1597 aa23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 CROCC2H7BZ55 1655 aa23.96■■□□□ 1.43
ATP6V1C2-201ENST00000272238 ZFYVE16Q7Z3T8 1539 aa23.95■■□□□ 1.42
ATP6V1C2-201ENST00000272238 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
ATP6V1C2-201ENST00000272238 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
ATP6V1C2-201ENST00000272238 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
ATP6V1C2-201ENST00000272238 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
ATP6V1C2-201ENST00000272238 KIDINS220Q9ULH0 1771 aa23.92■■□□□ 1.42
ATP6V1C2-201ENST00000272238 ABCA6Q8N139 1617 aa23.91■■□□□ 1.42
ATP6V1C2-201ENST00000272238 YEATS2Q9ULM3 1422 aa23.91■■□□□ 1.42
ATP6V1C2-201ENST00000272238 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
ATP6V1C2-201ENST00000272238 DIP2CQ9Y2E4 1556 aa23.88■■□□□ 1.41
ATP6V1C2-201ENST00000272238 MAGI2Q86UL8 1455 aa23.86■■□□□ 1.41
ATP6V1C2-201ENST00000272238 MLH3Q9UHC1 1453 aa23.86■■□□□ 1.41
ATP6V1C2-201ENST00000272238 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
ATP6V1C2-201ENST00000272238 DAPK1P53355 1430 aa23.86■■□□□ 1.41
ATP6V1C2-201ENST00000272238 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
ATP6V1C2-201ENST00000272238 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
ATP6V1C2-201ENST00000272238 SIGLEC1Q9BZZ2 1709 aa23.83■■□□□ 1.41
ATP6V1C2-201ENST00000272238 ABCC5O15440 1437 aa23.83■■□□□ 1.41
ATP6V1C2-201ENST00000272238 C9orf84Q5VXU9 1444 aa23.82■■□□□ 1.4
ATP6V1C2-201ENST00000272238 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
ATP6V1C2-201ENST00000272238 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
ATP6V1C2-201ENST00000272238 ITGAEP38570 1179 aa23.79■■□□□ 1.4
ATP6V1C2-201ENST00000272238 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
ATP6V1C2-201ENST00000272238 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
ATP6V1C2-201ENST00000272238 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
ATP6V1C2-201ENST00000272238 PLXNC1O60486 1568 aa23.77■■□□□ 1.4
ATP6V1C2-201ENST00000272238 ATP10AO60312 1499 aa23.76■■□□□ 1.39
ATP6V1C2-201ENST00000272238 CHIC2Q9UKJ5 165 aa23.75■■□□□ 1.39
ATP6V1C2-201ENST00000272238 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
ATP6V1C2-201ENST00000272238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
ATP6V1C2-201ENST00000272238 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
ATP6V1C2-201ENST00000272238 REREQ9P2R6 1566 aa23.72■■□□□ 1.39
ATP6V1C2-201ENST00000272238 ARID4BQ4LE39 1312 aaPredicted RBP23.71■■□□□ 1.39
ATP6V1C2-201ENST00000272238 A2MP01023 1474 aa23.7■■□□□ 1.38
ATP6V1C2-201ENST00000272238 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
ATP6V1C2-201ENST00000272238 BCORL1Q5H9F3 1711 aa23.66■■□□□ 1.38
ATP6V1C2-201ENST00000272238 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
ATP6V1C2-201ENST00000272238 ANKRD30AQ9BXX3 1397 aa23.65■■□□□ 1.38
ATP6V1C2-201ENST00000272238 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
ATP6V1C2-201ENST00000272238 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.38
ATP6V1C2-201ENST00000272238 MLECQ14165 292 aa23.63■■□□□ 1.37
ATP6V1C2-201ENST00000272238 NCOA1Q15788 1441 aa23.61■■□□□ 1.37
ATP6V1C2-201ENST00000272238 AGLP35573 1532 aa23.61■■□□□ 1.37
ATP6V1C2-201ENST00000272238 EIF2AK4Q9P2K8 1649 aaKnown RBP23.6■■□□□ 1.37
ATP6V1C2-201ENST00000272238 FER1L4A9Z1Z3 1794 aa23.6■■□□□ 1.37
ATP6V1C2-201ENST00000272238 DHX29Q7Z478 1369 aaKnown RBP23.6■■□□□ 1.37
ATP6V1C2-201ENST00000272238 MADDQ8WXG6 1647 aa23.6■■□□□ 1.37
ATP6V1C2-201ENST00000272238 GCC2Q8IWJ2 1684 aa23.59■■□□□ 1.37
ATP6V1C2-201ENST00000272238 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
ATP6V1C2-201ENST00000272238 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
ATP6V1C2-201ENST00000272238 ADAMTSL3P82987 1691 aa23.56■■□□□ 1.36
ATP6V1C2-201ENST00000272238 RIMS1Q86UR5 1692 aaKnown RBP23.56■■□□□ 1.36
ATP6V1C2-201ENST00000272238 KIF3BO15066 747 aa23.53■■□□□ 1.36
ATP6V1C2-201ENST00000272238 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
ATP6V1C2-201ENST00000272238 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
ATP6V1C2-201ENST00000272238 GGT6Q6P531 493 aa23.51■■□□□ 1.35
ATP6V1C2-201ENST00000272238 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms