RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 LRRC9Q6ZRR7 1453 aa30.18■■■□□ 2.42
SAMD1-201ENST00000269724 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
SAMD1-201ENST00000269724 DENND4BO75064 1496 aaPredicted RBP30.16■■■□□ 2.42
SAMD1-201ENST00000269724 GPATCH8Q9UKJ3 1502 aaKnown RBP30.16■■■□□ 2.42
SAMD1-201ENST00000269724 ADGRL1O94910 1474 aa30.15■■■□□ 2.42
SAMD1-201ENST00000269724 APLP2Q06481 763 aa30.15■■■□□ 2.42
SAMD1-201ENST00000269724 CCNB3Q8WWL7 1395 aa30.14■■■□□ 2.41
SAMD1-201ENST00000269724 RICTORQ6R327 1708 aa30.12■■■□□ 2.41
SAMD1-201ENST00000269724 FRMPD1Q5SYB0 1578 aa30.11■■■□□ 2.41
SAMD1-201ENST00000269724 RAPGEF3O95398 923 aa30.09■■■□□ 2.41
SAMD1-201ENST00000269724 NCOA2Q15596 1464 aa30.09■■■□□ 2.41
SAMD1-201ENST00000269724 SCAPERQ9BY12 1400 aa30.09■■■□□ 2.41
SAMD1-201ENST00000269724 ITSN2Q9NZM3 1697 aa30.09■■■□□ 2.41
SAMD1-201ENST00000269724 POGZQ7Z3K3 1410 aa30.05■■■□□ 2.4
SAMD1-201ENST00000269724 KANK4Q5T7N3 995 aaPredicted RBP30.04■■■□□ 2.4
SAMD1-201ENST00000269724 CFDP1Q9UEE9 299 aaPredicted RBP30.04■■■□□ 2.4
SAMD1-201ENST00000269724 ABCC1P33527 1531 aa30.04■■■□□ 2.4
SAMD1-201ENST00000269724 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
SAMD1-201ENST00000269724 ZNF518AQ6AHZ1 1483 aa30■■■□□ 2.39
SAMD1-201ENST00000269724 MAGI2Q86UL8 1455 aa30■■■□□ 2.39
SAMD1-201ENST00000269724 PLEKHH2Q8IVE3 1493 aa30■■■□□ 2.39
SAMD1-201ENST00000269724 SAMD9LQ8IVG5 1584 aa29.99■■■□□ 2.39
SAMD1-201ENST00000269724 KIAA1107Q9UPP5 1409 aa29.97■■■□□ 2.39
SAMD1-201ENST00000269724 KDM5CP41229 1560 aa29.95■■■□□ 2.39
SAMD1-201ENST00000269724 ARHGEF12Q9NZN5 1544 aa29.95■■■□□ 2.38
SAMD1-201ENST00000269724 ZNF777Q9ULD5 760 aaPredicted RBP29.94■■■□□ 2.38
SAMD1-201ENST00000269724 ARHGEF40Q8TER5 1519 aa29.92■■■□□ 2.38
SAMD1-201ENST00000269724 ZFYVE16Q7Z3T8 1539 aa29.9■■■□□ 2.38
SAMD1-201ENST00000269724 SYCP2Q9BX26 1530 aa29.9■■■□□ 2.38
SAMD1-201ENST00000269724 AFAP1Q8N556 730 aa29.89■■■□□ 2.38
SAMD1-201ENST00000269724 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
SAMD1-201ENST00000269724 MYOM3Q5VTT5 1437 aa29.88■■■□□ 2.37
SAMD1-201ENST00000269724 MIA2Q96PC5 1412 aa29.87■■■□□ 2.37
SAMD1-201ENST00000269724 MLH3Q9UHC1 1453 aa29.87■■■□□ 2.37
SAMD1-201ENST00000269724 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
SAMD1-201ENST00000269724 HNRNPMP52272 730 aaKnown RBP eCLIP29.83■■■□□ 2.37
SAMD1-201ENST00000269724 CAMSAP2Q08AD1 1489 aa29.82■■■□□ 2.36
SAMD1-201ENST00000269724 YEATS2Q9ULM3 1422 aa29.82■■■□□ 2.36
SAMD1-201ENST00000269724 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
SAMD1-201ENST00000269724 MBD5Q9P267 1494 aa29.81■■■□□ 2.36
SAMD1-201ENST00000269724 RSPH4AQ5TD94 716 aa29.8■■■□□ 2.36
SAMD1-201ENST00000269724 ATP10AO60312 1499 aa29.78■■■□□ 2.36
SAMD1-201ENST00000269724 KIDINS220Q9ULH0 1771 aa29.75■■■□□ 2.35
SAMD1-201ENST00000269724 ARHGEF5Q12774 1597 aa29.75■■■□□ 2.35
SAMD1-201ENST00000269724 SPAG9O60271 1321 aaKnown RBP29.74■■■□□ 2.35
SAMD1-201ENST00000269724 C9orf84Q5VXU9 1444 aa29.73■■■□□ 2.35
SAMD1-201ENST00000269724 MYT1LQ9UL68 1186 aa29.73■■■□□ 2.35
SAMD1-201ENST00000269724 REREQ9P2R6 1566 aa29.73■■■□□ 2.35
SAMD1-201ENST00000269724 DIP2CQ9Y2E4 1556 aa29.73■■■□□ 2.35
SAMD1-201ENST00000269724 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
SAMD1-201ENST00000269724 INO80Q9ULG1 1556 aaPredicted RBP29.72■■■□□ 2.35
SAMD1-201ENST00000269724 KDM4FA0A1W2PPD8 638 aa29.71■■■□□ 2.35
SAMD1-201ENST00000269724 ABCA6Q8N139 1617 aa29.71■■■□□ 2.35
SAMD1-201ENST00000269724 FGD6Q6ZV73 1430 aa29.71■■■□□ 2.35
SAMD1-201ENST00000269724 ATP7AQ04656 1500 aa29.7■■■□□ 2.34
SAMD1-201ENST00000269724 RTEL1-TNFRSF6BF6WH68 1400 aa29.7■■■□□ 2.34
SAMD1-201ENST00000269724 PTPN23Q9H3S7 1636 aa29.69■■■□□ 2.34
SAMD1-201ENST00000269724 TCOF1Q13428 1488 aaKnown RBP29.66■■■□□ 2.34
SAMD1-201ENST00000269724 ARID4BQ4LE39 1312 aaPredicted RBP29.66■■■□□ 2.34
SAMD1-201ENST00000269724 BCORL1Q5H9F3 1711 aa29.65■■■□□ 2.34
SAMD1-201ENST00000269724 SIGLEC1Q9BZZ2 1709 aa29.64■■■□□ 2.34
SAMD1-201ENST00000269724 AGLP35573 1532 aa29.61■■■□□ 2.33
SAMD1-201ENST00000269724 ADAMTSL3P82987 1691 aa29.61■■■□□ 2.33
SAMD1-201ENST00000269724 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
SAMD1-201ENST00000269724 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
SAMD1-201ENST00000269724 MAST1Q9Y2H9 1570 aa29.59■■■□□ 2.33
SAMD1-201ENST00000269724 ADGBQ8N7X0 1667 aa29.59■■■□□ 2.33
SAMD1-201ENST00000269724 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
SAMD1-201ENST00000269724 PLXNC1O60486 1568 aa29.55■■■□□ 2.32
SAMD1-201ENST00000269724 A2MP01023 1474 aa29.55■■■□□ 2.32
SAMD1-201ENST00000269724 DNMT1P26358 1616 aaKnown RBP29.54■■■□□ 2.32
SAMD1-201ENST00000269724 SHANK2Q9UPX8 1470 aa29.53■■■□□ 2.32
SAMD1-201ENST00000269724 CROCC2H7BZ55 1655 aa29.52■■■□□ 2.32
SAMD1-201ENST00000269724 ABCC5O15440 1437 aa29.51■■■□□ 2.31
SAMD1-201ENST00000269724 DAPK1P53355 1430 aa29.5■■■□□ 2.31
SAMD1-201ENST00000269724 MADDQ8WXG6 1647 aa29.49■■■□□ 2.31
SAMD1-201ENST00000269724 PPARGC1BQ86YN6 1023 aaKnown RBP29.48■■■□□ 2.31
SAMD1-201ENST00000269724 DHX29Q7Z478 1369 aaKnown RBP29.47■■■□□ 2.31
SAMD1-201ENST00000269724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.45■■■□□ 2.311e-7■□□□□ 10.1
SAMD1-201ENST00000269724 FAM50AQ14320 339 aaKnown RBP29.44■■■□□ 2.3
SAMD1-201ENST00000269724 FER1L4A9Z1Z3 1794 aa29.44■■■□□ 2.3
SAMD1-201ENST00000269724 MLECQ14165 292 aa29.43■■■□□ 2.3
SAMD1-201ENST00000269724 PTPRMP28827 1452 aa29.41■■■□□ 2.3
SAMD1-201ENST00000269724 RIMS1Q86UR5 1692 aaKnown RBP29.4■■■□□ 2.3
SAMD1-201ENST00000269724 RRBP1Q9P2E9 1410 aaKnown RBP29.37■■■□□ 2.29
SAMD1-201ENST00000269724 DUOX2Q9NRD8 1548 aa29.36■■■□□ 2.29
SAMD1-201ENST00000269724 PPP6R1Q9UPN7 881 aa29.36■■■□□ 2.29
SAMD1-201ENST00000269724 ANKRD30AQ9BXX3 1397 aa29.35■■■□□ 2.29
SAMD1-201ENST00000269724 ADGRL2O95490 1459 aa29.35■■■□□ 2.29
SAMD1-201ENST00000269724 EIF2AK4Q9P2K8 1649 aaKnown RBP29.34■■■□□ 2.29
SAMD1-201ENST00000269724 CNTLNQ9NXG0 1405 aa29.33■■■□□ 2.29
SAMD1-201ENST00000269724 KIF15Q9NS87 1388 aa29.32■■■□□ 2.28
SAMD1-201ENST00000269724 NCOA1Q15788 1441 aa29.3■■■□□ 2.28
SAMD1-201ENST00000269724 ESF1Q9H501 851 aaKnown RBP29.3■■■□□ 2.28
SAMD1-201ENST00000269724 KIF3BO15066 747 aa29.29■■■□□ 2.28
SAMD1-201ENST00000269724 FAM135AQ9P2D6 1515 aa29.29■■■□□ 2.28
SAMD1-201ENST00000269724 ERBINQ96RT1 1412 aa29.28■■■□□ 2.28
SAMD1-201ENST00000269724 GGT6Q6P531 493 aa29.27■■■□□ 2.28
SAMD1-201ENST00000269724 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
SAMD1-201ENST00000269724 MROH2AA6NES4 1674 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms