RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
POLB-201ENST00000265421 FRMPD1Q5SYB0 1578 aa17.56■□□□□ 0.4
POLB-201ENST00000265421 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
POLB-201ENST00000265421 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
POLB-201ENST00000265421 CFDP1Q9UEE9 299 aaPredicted RBP17.54■□□□□ 0.4
POLB-201ENST00000265421 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
POLB-201ENST00000265421 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
POLB-201ENST00000265421 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
POLB-201ENST00000265421 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
POLB-201ENST00000265421 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
POLB-201ENST00000265421 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.39
POLB-201ENST00000265421 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.39
POLB-201ENST00000265421 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
POLB-201ENST00000265421 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
POLB-201ENST00000265421 ATP10AO60312 1499 aa17.48■□□□□ 0.39
POLB-201ENST00000265421 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
POLB-201ENST00000265421 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
POLB-201ENST00000265421 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
POLB-201ENST00000265421 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
POLB-201ENST00000265421 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
POLB-201ENST00000265421 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
POLB-201ENST00000265421 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
POLB-201ENST00000265421 MYO5CQ9NQX4 1742 aa17.45■□□□□ 0.38
POLB-201ENST00000265421 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
POLB-201ENST00000265421 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
POLB-201ENST00000265421 C9orf84Q5VXU9 1444 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 KDM5CP41229 1560 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
POLB-201ENST00000265421 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 ABCC1P33527 1531 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
POLB-201ENST00000265421 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
POLB-201ENST00000265421 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
POLB-201ENST00000265421 PTPRMP28827 1452 aa17.4■□□□□ 0.38
POLB-201ENST00000265421 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
POLB-201ENST00000265421 APLP2Q06481 763 aa17.4■□□□□ 0.38
POLB-201ENST00000265421 NCOA2Q15596 1464 aa17.39■□□□□ 0.37
POLB-201ENST00000265421 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
POLB-201ENST00000265421 MLECQ14165 292 aa17.39■□□□□ 0.37
POLB-201ENST00000265421 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
POLB-201ENST00000265421 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
POLB-201ENST00000265421 ADAMTSL3P82987 1691 aa17.37■□□□□ 0.37
POLB-201ENST00000265421 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
POLB-201ENST00000265421 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.37
POLB-201ENST00000265421 REREQ9P2R6 1566 aa17.33■□□□□ 0.37
POLB-201ENST00000265421 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.37
POLB-201ENST00000265421 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.36
POLB-201ENST00000265421 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.36
POLB-201ENST00000265421 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
POLB-201ENST00000265421 AGLP35573 1532 aa17.32■□□□□ 0.36
POLB-201ENST00000265421 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
POLB-201ENST00000265421 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
POLB-201ENST00000265421 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
POLB-201ENST00000265421 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
POLB-201ENST00000265421 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
POLB-201ENST00000265421 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
POLB-201ENST00000265421 ESF1Q9H501 851 aaKnown RBP17.26■□□□□ 0.35
POLB-201ENST00000265421 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
POLB-201ENST00000265421 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
POLB-201ENST00000265421 MADDQ8WXG6 1647 aa17.26■□□□□ 0.35
POLB-201ENST00000265421 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
POLB-201ENST00000265421 A2MP01023 1474 aa17.25■□□□□ 0.35
POLB-201ENST00000265421 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
POLB-201ENST00000265421 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
POLB-201ENST00000265421 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
POLB-201ENST00000265421 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
POLB-201ENST00000265421 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
POLB-201ENST00000265421 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
POLB-201ENST00000265421 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
POLB-201ENST00000265421 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
POLB-201ENST00000265421 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.34
POLB-201ENST00000265421 GGT6Q6P531 493 aa17.2■□□□□ 0.34
POLB-201ENST00000265421 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
POLB-201ENST00000265421 ZMYM3Q14202 1370 aa17.19■□□□□ 0.34
POLB-201ENST00000265421 ARHGEF5Q12774 1597 aa17.17■□□□□ 0.34
POLB-201ENST00000265421 LMTK3Q96Q04 1460 aa17.17■□□□□ 0.34
POLB-201ENST00000265421 KIF3BO15066 747 aa17.17■□□□□ 0.34
POLB-201ENST00000265421 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
POLB-201ENST00000265421 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
POLB-201ENST00000265421 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
POLB-201ENST00000265421 HSPA2P54652 639 aa17.13■□□□□ 0.33
POLB-201ENST00000265421 ABCC5O15440 1437 aa17.12■□□□□ 0.33
POLB-201ENST00000265421 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
POLB-201ENST00000265421 NPATQ14207 1427 aa17.11■□□□□ 0.33
POLB-201ENST00000265421 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
POLB-201ENST00000265421 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.33
POLB-201ENST00000265421 FOXD1Q16676 465 aa17.08■□□□□ 0.32
POLB-201ENST00000265421 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.32
POLB-201ENST00000265421 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
POLB-201ENST00000265421 DAPK1P53355 1430 aa17.06■□□□□ 0.32
POLB-201ENST00000265421 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
POLB-201ENST00000265421 SHANK2Q9UPX8 1470 aa17.06■□□□□ 0.32
POLB-201ENST00000265421 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
POLB-201ENST00000265421 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
POLB-201ENST00000265421 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
POLB-201ENST00000265421 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
POLB-201ENST00000265421 ANKRD30AQ9BXX3 1397 aa17.03■□□□□ 0.32
POLB-201ENST00000265421 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms