RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
CROCCP3-201ENST00000263511 HSPA5P11021 654 aaKnown RBP21.58■■□□□ 1.04
CROCCP3-201ENST00000263511 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
CROCCP3-201ENST00000263511 TULP1O00294 542 aaPredicted RBP21.57■■□□□ 1.04
CROCCP3-201ENST00000263511 HSP90AB1P08238 724 aaKnown RBP21.57■■□□□ 1.04
CROCCP3-201ENST00000263511 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
CROCCP3-201ENST00000263511 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
CROCCP3-201ENST00000263511 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
CROCCP3-201ENST00000263511 NUP155O75694 1391 aa21.55■■□□□ 1.04
CROCCP3-201ENST00000263511 NAP1L2Q9ULW6 460 aaPredicted RBP21.55■■□□□ 1.04
CROCCP3-201ENST00000263511 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
CROCCP3-201ENST00000263511 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
CROCCP3-201ENST00000263511 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CROCCP3-201ENST00000263511 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
CROCCP3-201ENST00000263511 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-201ENST00000263511 ROCK2O75116 1388 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-201ENST00000263511 MPHOSPH9Q99550 1183 aa21.51■■□□□ 1.03
CROCCP3-201ENST00000263511 IPO8O15397 1037 aaKnown RBP21.5■■□□□ 1.03
CROCCP3-201ENST00000263511 CSB-PGBD3P0DP91 1061 aa21.5■■□□□ 1.03
CROCCP3-201ENST00000263511 MCCP23508 829 aa21.49■■□□□ 1.03
CROCCP3-201ENST00000263511 CFAP44Q96MT7 982 aa21.49■■□□□ 1.03
CROCCP3-201ENST00000263511 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
CROCCP3-201ENST00000263511 KIF3BO15066 747 aa21.49■■□□□ 1.03
CROCCP3-201ENST00000263511 DNTTIP2Q5QJE6 756 aaKnown RBP21.49■■□□□ 1.03
CROCCP3-201ENST00000263511 U2AF1L5P0DN76 240 aaPredicted RBP21.47■■□□□ 1.03
CROCCP3-201ENST00000263511 U2AF1Q01081 240 aaKnown RBP eCLIP21.47■■□□□ 1.03
CROCCP3-201ENST00000263511 B4GALNT3Q6L9W6 998 aa21.47■■□□□ 1.03
CROCCP3-201ENST00000263511 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
CROCCP3-201ENST00000263511 PLCB2Q00722 1185 aa21.46■■□□□ 1.03
CROCCP3-201ENST00000263511 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
CROCCP3-201ENST00000263511 GOLGA6L4A6NEF3 574 aa21.45■■□□□ 1.02
CROCCP3-201ENST00000263511 GOLGA6L6A8MZA4 724 aa21.45■■□□□ 1.02
CROCCP3-201ENST00000263511 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
CROCCP3-201ENST00000263511 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
CROCCP3-201ENST00000263511 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
CROCCP3-201ENST00000263511 RALBP1Q15311 655 aa21.44■■□□□ 1.02
CROCCP3-201ENST00000263511 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
CROCCP3-201ENST00000263511 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
CROCCP3-201ENST00000263511 NRDCO43847 1150 aa21.41■■□□□ 1.02
CROCCP3-201ENST00000263511 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
CROCCP3-201ENST00000263511 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
CROCCP3-201ENST00000263511 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.02
CROCCP3-201ENST00000263511 NOP58Q9Y2X3 529 aaKnown RBP21.39■■□□□ 1.01
CROCCP3-201ENST00000263511 WASHC2CQ9Y4E1 1318 aa21.39■■□□□ 1.01
CROCCP3-201ENST00000263511 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
CROCCP3-201ENST00000263511 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
CROCCP3-201ENST00000263511 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
CROCCP3-201ENST00000263511 KIAA1211Q6ZU35 1233 aa21.36■■□□□ 1.01
CROCCP3-201ENST00000263511 APBB1O00213 710 aa21.35■■□□□ 1.01
CROCCP3-201ENST00000263511 ISY1Q9ULR0 285 aaKnown RBP21.35■■□□□ 1.01
CROCCP3-201ENST00000263511 STK31Q9BXU1 1019 aa21.34■■□□□ 1.01
CROCCP3-201ENST00000263511 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
CROCCP3-201ENST00000263511 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
CROCCP3-201ENST00000263511 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
CROCCP3-201ENST00000263511 RTN4Q9NQC3 1192 aaKnown RBP21.33■■□□□ 1
CROCCP3-201ENST00000263511 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
CROCCP3-201ENST00000263511 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
CROCCP3-201ENST00000263511 RWDD1Q9H446 243 aaPredicted RBP21.32■■□□□ 1
CROCCP3-201ENST00000263511 RCAN3Q9UKA8 241 aa21.31■■□□□ 1
CROCCP3-201ENST00000263511 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
CROCCP3-201ENST00000263511 HDAC5Q9UQL6 1122 aa21.3■■□□□ 1
CROCCP3-201ENST00000263511 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
CROCCP3-201ENST00000263511 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
CROCCP3-201ENST00000263511 TMX4Q9H1E5 349 aaPredicted RBP21.28■■□□□ 1
CROCCP3-201ENST00000263511 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
CROCCP3-201ENST00000263511 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
CROCCP3-201ENST00000263511 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
CROCCP3-201ENST00000263511 AMPHP49418 695 aa21.25■□□□□ 0.99
CROCCP3-201ENST00000263511 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
CROCCP3-201ENST00000263511 GORABQ5T7V8 394 aa21.24■□□□□ 0.99
CROCCP3-201ENST00000263511 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
CROCCP3-201ENST00000263511 DEKP35659 375 aaKnown RBP21.23■□□□□ 0.99
CROCCP3-201ENST00000263511 RBM19Q9Y4C8 960 aaKnown RBP21.22■□□□□ 0.99
CROCCP3-201ENST00000263511 HMMRO75330 724 aa21.22■□□□□ 0.99
CROCCP3-201ENST00000263511 CLSTN1O94985 981 aa21.21■□□□□ 0.99
CROCCP3-201ENST00000263511 SPRYD3Q8NCJ5 442 aa21.21■□□□□ 0.99
CROCCP3-201ENST00000263511 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
CROCCP3-201ENST00000263511 NLRP13Q86W25 1043 aa21.21■□□□□ 0.99
CROCCP3-201ENST00000263511 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
CROCCP3-201ENST00000263511 GPATCH3Q96I76 525 aa21.2■□□□□ 0.98
CROCCP3-201ENST00000263511 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
CROCCP3-201ENST00000263511 NAP1L5Q96NT1 182 aaPredicted RBP21.19■□□□□ 0.98
CROCCP3-201ENST00000263511 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
CROCCP3-201ENST00000263511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.17■□□□□ 0.98
CROCCP3-201ENST00000263511 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
CROCCP3-201ENST00000263511 CHAF1AQ13111 956 aaPredicted RBP21.16■□□□□ 0.98
CROCCP3-201ENST00000263511 LTV1Q96GA3 475 aaPredicted RBP21.16■□□□□ 0.98
CROCCP3-201ENST00000263511 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
CROCCP3-201ENST00000263511 HTATSF1O43719 755 aaKnown RBP21.15■□□□□ 0.98
CROCCP3-201ENST00000263511 L1TD1Q5T7N2 865 aaKnown RBP21.15■□□□□ 0.98
CROCCP3-201ENST00000263511 DRC7Q8IY82 874 aa21.15■□□□□ 0.98
CROCCP3-201ENST00000263511 UACAQ9BZF9 1416 aa21.14■□□□□ 0.98
CROCCP3-201ENST00000263511 SLC4A10Q6U841 1118 aa21.14■□□□□ 0.98
CROCCP3-201ENST00000263511 PTPRGP23470 1445 aa21.14■□□□□ 0.97
CROCCP3-201ENST00000263511 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
CROCCP3-201ENST00000263511 CCDC146Q8IYE0 955 aa21.13■□□□□ 0.97
CROCCP3-201ENST00000263511 GBP4Q96PP9 640 aa21.13■□□□□ 0.97
CROCCP3-201ENST00000263511 PHLDB1Q86UU1 1377 aa21.13■□□□□ 0.97
CROCCP3-201ENST00000263511 TCERG1O14776 1098 aaKnown RBP21.13■□□□□ 0.97
CROCCP3-201ENST00000263511 VGFO15240 615 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms