RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 ZFYVE16Q7Z3T8 1539 aa37.49■■■■□ 3.59
HMG20B-201ENST00000262949 POGZQ7Z3K3 1410 aa37.48■■■■□ 3.59
HMG20B-201ENST00000262949 CASKIN1Q8WXD9 1431 aa37.48■■■■□ 3.59
HMG20B-201ENST00000262949 CCDC18Q5T9S5 1454 aa37.45■■■■□ 3.59
HMG20B-201ENST00000262949 YEATS2Q9ULM3 1422 aa37.44■■■■□ 3.58
HMG20B-201ENST00000262949 ARHGAP5Q13017 1502 aa37.42■■■■□ 3.58
HMG20B-201ENST00000262949 MADDQ8WXG6 1647 aa37.42■■■■□ 3.58
HMG20B-201ENST00000262949 PCF11O94913 1555 aaKnown RBP37.4■■■■□ 3.58
HMG20B-201ENST00000262949 LRRIQ1Q96JM4 1722 aa37.39■■■■□ 3.58
HMG20B-201ENST00000262949 MYT1LQ9UL68 1186 aa37.34■■■■□ 3.57
HMG20B-201ENST00000262949 ZNF518AQ6AHZ1 1483 aa37.33■■■■□ 3.57
HMG20B-201ENST00000262949 MLECQ14165 292 aa37.33■■■■□ 3.57
HMG20B-201ENST00000262949 FYCO1Q9BQS8 1478 aa37.33■■■■□ 3.57
HMG20B-201ENST00000262949 ATP10AO60312 1499 aa37.31■■■■□ 3.56
HMG20B-201ENST00000262949 RIMS1Q86UR5 1692 aaKnown RBP37.3■■■■□ 3.56
HMG20B-201ENST00000262949 AFAP1Q8N556 730 aa37.28■■■■□ 3.56
HMG20B-201ENST00000262949 C9orf84Q5VXU9 1444 aa37.27■■■■□ 3.56
HMG20B-201ENST00000262949 PLPPR3Q6T4P5 718 aa37.26■■■■□ 3.56
HMG20B-201ENST00000262949 ILDR1Q86SU0 546 aaPredicted RBP37.24■■■■□ 3.55
HMG20B-201ENST00000262949 CDC42BPBQ9Y5S2 1711 aa37.2■■■■□ 3.55
HMG20B-201ENST00000262949 SIGLEC1Q9BZZ2 1709 aa37.19■■■■□ 3.54
HMG20B-201ENST00000262949 PREX2Q70Z35 1606 aa37.19■■■■□ 3.54
HMG20B-201ENST00000262949 KDM5CP41229 1560 aa37.18■■■■□ 3.54
HMG20B-201ENST00000262949 LMTK3Q96Q04 1460 aa37.12■■■■□ 3.53
HMG20B-201ENST00000262949 FER1L4A9Z1Z3 1794 aa37.12■■■■□ 3.53
HMG20B-201ENST00000262949 ZNF777Q9ULD5 760 aaPredicted RBP37.11■■■■□ 3.53
HMG20B-201ENST00000262949 ABCC1P33527 1531 aa37.1■■■■□ 3.53
HMG20B-201ENST00000262949 MLH3Q9UHC1 1453 aa37.09■■■■□ 3.53
HMG20B-201ENST00000262949 ARHGEF12Q9NZN5 1544 aa37.08■■■■□ 3.53
HMG20B-201ENST00000262949 TRAPPC8Q9Y2L5 1435 aa37.08■■■■□ 3.53
HMG20B-201ENST00000262949 CDC42BPAQ5VT25 1732 aa37.06■■■■□ 3.52
HMG20B-201ENST00000262949 MTUS2Q5JR59 1369 aa37.04■■■■□ 3.52
HMG20B-201ENST00000262949 DIP2CQ9Y2E4 1556 aa37.04■■■■□ 3.52
HMG20B-201ENST00000262949 ITSN2Q9NZM3 1697 aa37.02■■■■□ 3.52
HMG20B-201ENST00000262949 GPATCH8Q9UKJ3 1502 aaKnown RBP37■■■■□ 3.51
HMG20B-201ENST00000262949 CFDP1Q9UEE9 299 aaPredicted RBP37■■■■□ 3.51
HMG20B-201ENST00000262949 CCNB3Q8WWL7 1395 aa37■■■■□ 3.51
HMG20B-201ENST00000262949 HSPA2P54652 639 aa36.99■■■■□ 3.51
HMG20B-201ENST00000262949 REREQ9P2R6 1566 aa36.99■■■■□ 3.51
HMG20B-201ENST00000262949 ESF1Q9H501 851 aaKnown RBP36.98■■■■□ 3.51
HMG20B-201ENST00000262949 ABCA6Q8N139 1617 aa36.96■■■■□ 3.51
HMG20B-201ENST00000262949 CEP162Q5TB80 1403 aa36.96■■■■□ 3.51
HMG20B-201ENST00000262949 CEBPAP49715 358 aaPredicted RBP36.94■■■■□ 3.5
HMG20B-201ENST00000262949 HNRNPMP52272 730 aaKnown RBP eCLIP36.93■■■■□ 3.5
HMG20B-201ENST00000262949 SAMD9LQ8IVG5 1584 aa36.91■■■■□ 3.5
HMG20B-201ENST00000262949 SPAG9O60271 1321 aaKnown RBP36.91■■■■□ 3.5
HMG20B-201ENST00000262949 PLEKHH2Q8IVE3 1493 aa36.91■■■■□ 3.5
HMG20B-201ENST00000262949 AGLP35573 1532 aa36.9■■■■□ 3.5
HMG20B-201ENST00000262949 SYCP2Q9BX26 1530 aa36.9■■■■□ 3.5
HMG20B-201ENST00000262949 KIAA1107Q9UPP5 1409 aa36.88■■■■□ 3.49
HMG20B-201ENST00000262949 KIDINS220Q9ULH0 1771 aa36.88■■■■□ 3.49
HMG20B-201ENST00000262949 EHBP1L1Q8N3D4 1523 aa36.83■■■■□ 3.49
HMG20B-201ENST00000262949 FBXO41Q8TF61 875 aa36.82■■■■□ 3.48
HMG20B-201ENST00000262949 PREX1Q8TCU6 1659 aa36.8■■■■□ 3.48
HMG20B-201ENST00000262949 UHRF1BP1Q6BDS2 1440 aa36.77■■■■□ 3.48
HMG20B-201ENST00000262949 CNTLNQ9NXG0 1405 aa36.76■■■■□ 3.48
HMG20B-201ENST00000262949 SETD1BQ9UPS6 1966 aaKnown RBP36.75■■■■□ 3.47
HMG20B-201ENST00000262949 ATP7AQ04656 1500 aa36.75■■■■□ 3.47
HMG20B-201ENST00000262949 TIAM1Q13009 1591 aa36.73■■■■□ 3.47
HMG20B-201ENST00000262949 ZNF644Q9H582 1327 aaPredicted RBP36.7■■■■□ 3.47
HMG20B-201ENST00000262949 LOC105371045A0A1W2PR82 267 aa36.69■■■■□ 3.46
HMG20B-201ENST00000262949 C3P01024 1663 aa36.67■■■■□ 3.46
HMG20B-201ENST00000262949 A2MP01023 1474 aa36.67■■■■□ 3.46
HMG20B-201ENST00000262949 DMRT2Q9Y5R5 561 aa36.66■■■■□ 3.46
HMG20B-201ENST00000262949 INO80Q9ULG1 1556 aaPredicted RBP36.66■■■■□ 3.46
HMG20B-201ENST00000262949 SUPT6HQ7KZ85 1726 aaKnown RBP36.64■■■■□ 3.46
HMG20B-201ENST00000262949 NCOA2Q15596 1464 aa36.61■■■■□ 3.45
HMG20B-201ENST00000262949 MBD5Q9P267 1494 aa36.6■■■■□ 3.45
HMG20B-201ENST00000262949 GGT6Q6P531 493 aa36.59■■■■□ 3.45
HMG20B-201ENST00000262949 ZMYM3Q14202 1370 aa36.58■■■■□ 3.45
HMG20B-201ENST00000262949 VPS8Q8N3P4 1428 aa36.58■■■■□ 3.45
HMG20B-201ENST00000262949 PLXNC1O60486 1568 aa36.57■■■■□ 3.44
HMG20B-201ENST00000262949 RSPH4AQ5TD94 716 aa36.56■■■■□ 3.44
HMG20B-201ENST00000262949 RTEL1-TNFRSF6BF6WH68 1400 aa36.56■■■■□ 3.44
HMG20B-201ENST00000262949 CERKQ8TCT0 537 aa36.53■■■■□ 3.44
HMG20B-201ENST00000262949 PPP6R1Q9UPN7 881 aa36.53■■■■□ 3.44
HMG20B-201ENST00000262949 MROH2AA6NES4 1674 aa36.53■■■■□ 3.44
HMG20B-201ENST00000262949 ADGBQ8N7X0 1667 aa36.53■■■■□ 3.44
HMG20B-201ENST00000262949 NPATQ14207 1427 aa36.52■■■■□ 3.44
HMG20B-201ENST00000262949 CAMSAP2Q08AD1 1489 aa36.49■■■■□ 3.43
HMG20B-201ENST00000262949 CCDC141Q6ZP82 1450 aa36.49■■■■□ 3.43
HMG20B-201ENST00000262949 DHX29Q7Z478 1369 aaKnown RBP36.46■■■■□ 3.43
HMG20B-201ENST00000262949 STRCQ7RTU9 1775 aa36.45■■■■□ 3.43
HMG20B-201ENST00000262949 LRRC9Q6ZRR7 1453 aa36.45■■■■□ 3.43
HMG20B-201ENST00000262949 CLTCQ00610 1675 aaKnown RBP36.45■■■■□ 3.42
HMG20B-201ENST00000262949 TSPY4P0CV99 314 aa36.44■■■■□ 3.42
HMG20B-201ENST00000262949 TSPY10P0CW01 314 aa36.44■■■■□ 3.42
HMG20B-201ENST00000262949 PTPRTO14522 1441 aa36.4■■■■□ 3.42
HMG20B-201ENST00000262949 KIF3BO15066 747 aa36.39■■■■□ 3.42
HMG20B-201ENST00000262949 MAP3K1Q13233 1512 aa36.36■■■■□ 3.41
HMG20B-201ENST00000262949 PTPRKQ15262 1439 aa36.34■■■■□ 3.41
HMG20B-201ENST00000262949 NCOA1Q15788 1441 aa36.34■■■■□ 3.41
HMG20B-201ENST00000262949 ARHGEF5Q12774 1597 aa36.33■■■■□ 3.41
HMG20B-201ENST00000262949 APLP2Q06481 763 aa36.33■■■■□ 3.41
HMG20B-201ENST00000262949 KANK4Q5T7N3 995 aaPredicted RBP36.33■■■■□ 3.41
HMG20B-201ENST00000262949 CAMSAP1Q5T5Y3 1602 aa36.3■■■■□ 3.4
HMG20B-201ENST00000262949 WASHC2CQ9Y4E1 1318 aa36.27■■■■□ 3.4
HMG20B-201ENST00000262949 MIA2Q96PC5 1412 aa36.25■■■■□ 3.39
HMG20B-201ENST00000262949 MYO3AQ8NEV4 1616 aa36.24■■■■□ 3.39
HMG20B-201ENST00000262949 MYOM3Q5VTT5 1437 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms