RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
PKD1-201ENST00000262304 GOLGA6L1Q8N7Z2 621 aa13□□□□□ -0.33
PKD1-201ENST00000262304 RGL3Q3MIN7 710 aa13□□□□□ -0.33
PKD1-201ENST00000262304 EEA1Q15075 1411 aa13□□□□□ -0.33
PKD1-201ENST00000262304 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
PKD1-201ENST00000262304 CCAR2Q8N163 923 aaKnown RBP12.99□□□□□ -0.33
PKD1-201ENST00000262304 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
PKD1-201ENST00000262304 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
PKD1-201ENST00000262304 SOX12O15370 315 aa12.95□□□□□ -0.34
PKD1-201ENST00000262304 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
PKD1-201ENST00000262304 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
PKD1-201ENST00000262304 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
PKD1-201ENST00000262304 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
PKD1-201ENST00000262304 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
PKD1-201ENST00000262304 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
PKD1-201ENST00000262304 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
PKD1-201ENST00000262304 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
PKD1-201ENST00000262304 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
PKD1-201ENST00000262304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
PKD1-201ENST00000262304 SETQ01105 290 aaPredicted RBP12.91□□□□□ -0.34
PKD1-201ENST00000262304 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
PKD1-201ENST00000262304 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
PKD1-201ENST00000262304 GOLGA6L3A6NEY3 463 aa12.89□□□□□ -0.35
PKD1-201ENST00000262304 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
PKD1-201ENST00000262304 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
PKD1-201ENST00000262304 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
PKD1-201ENST00000262304 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
PKD1-201ENST00000262304 ZNF592Q92610 1267 aa12.87□□□□□ -0.35
PKD1-201ENST00000262304 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
PKD1-201ENST00000262304 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
PKD1-201ENST00000262304 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
PKD1-201ENST00000262304 MCCP23508 829 aa12.85□□□□□ -0.35
PKD1-201ENST00000262304 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
PKD1-201ENST00000262304 PES1O00541 588 aaKnown RBP12.84□□□□□ -0.35
PKD1-201ENST00000262304 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
PKD1-201ENST00000262304 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
PKD1-201ENST00000262304 KIAA1211Q6ZU35 1233 aa12.83□□□□□ -0.36
PKD1-201ENST00000262304 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
PKD1-201ENST00000262304 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
PKD1-201ENST00000262304 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
PKD1-201ENST00000262304 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
PKD1-201ENST00000262304 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
PKD1-201ENST00000262304 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
PKD1-201ENST00000262304 RASSF8Q8NHQ8 419 aa12.8□□□□□ -0.36
PKD1-201ENST00000262304 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
PKD1-201ENST00000262304 CECR2Q9BXF3 1484 aa12.8□□□□□ -0.36
PKD1-201ENST00000262304 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
PKD1-201ENST00000262304 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
PKD1-201ENST00000262304 PLCD4Q9BRC7 762 aa12.79□□□□□ -0.36
PKD1-201ENST00000262304 CUX2O14529 1486 aa12.79□□□□□ -0.36
PKD1-201ENST00000262304 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
PKD1-201ENST00000262304 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
PKD1-201ENST00000262304 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
PKD1-201ENST00000262304 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.36
PKD1-201ENST00000262304 APPP05067 770 aa12.77□□□□□ -0.36
PKD1-201ENST00000262304 FHAD1B1AJZ9 1412 aa12.77□□□□□ -0.37
PKD1-201ENST00000262304 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
PKD1-201ENST00000262304 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
PKD1-201ENST00000262304 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
PKD1-201ENST00000262304 TPM4P67936 248 aa12.76□□□□□ -0.37
PKD1-201ENST00000262304 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 POGKQ9P215 609 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 SYAP1Q96A49 352 aaPredicted RBP12.75□□□□□ -0.37
PKD1-201ENST00000262304 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 CHMP3Q9Y3E7 222 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 TPM3P06753 285 aa12.75□□□□□ -0.37
PKD1-201ENST00000262304 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
PKD1-201ENST00000262304 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
PKD1-201ENST00000262304 KANK1Q14678 1352 aa12.74□□□□□ -0.37
PKD1-201ENST00000262304 FOSBP53539 338 aa12.72□□□□□ -0.37
PKD1-201ENST00000262304 PDS5BQ9NTI5 1447 aa12.72□□□□□ -0.37
PKD1-201ENST00000262304 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
PKD1-201ENST00000262304 CEP89Q96ST8 783 aa12.71□□□□□ -0.38
PKD1-201ENST00000262304 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
PKD1-201ENST00000262304 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
PKD1-201ENST00000262304 MLECQ14165 292 aa12.7□□□□□ -0.38
PKD1-201ENST00000262304 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
PKD1-201ENST00000262304 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
PKD1-201ENST00000262304 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
PKD1-201ENST00000262304 GON4LQ3T8J9 2241 aa12.67□□□□□ -0.38
PKD1-201ENST00000262304 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
PKD1-201ENST00000262304 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
PKD1-201ENST00000262304 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
PKD1-201ENST00000262304 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
PKD1-201ENST00000262304 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
PKD1-201ENST00000262304 SOGA1O94964 1423 aa12.66□□□□□ -0.38
PKD1-201ENST00000262304 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
PKD1-201ENST00000262304 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
PKD1-201ENST00000262304 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
PKD1-201ENST00000262304 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
PKD1-201ENST00000262304 MAP7D2Q96T17 732 aa12.65□□□□□ -0.38
PKD1-201ENST00000262304 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
PKD1-201ENST00000262304 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
PKD1-201ENST00000262304 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
PKD1-201ENST00000262304 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.39
PKD1-201ENST00000262304 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
PKD1-201ENST00000262304 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
PKD1-201ENST00000262304 MARCH6O60337 910 aa12.64□□□□□ -0.39
PKD1-201ENST00000262304 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms