RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DAPK1P53355 1430 aa19.63■□□□□ 0.73
VMP1-201ENST00000262291 FOXD1Q16676 465 aa19.62■□□□□ 0.73
VMP1-201ENST00000262291 UACAQ9BZF9 1416 aa19.62■□□□□ 0.73
VMP1-201ENST00000262291 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
VMP1-201ENST00000262291 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
VMP1-201ENST00000262291 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.73
VMP1-201ENST00000262291 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
VMP1-201ENST00000262291 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
VMP1-201ENST00000262291 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
VMP1-201ENST00000262291 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
VMP1-201ENST00000262291 GCC2Q8IWJ2 1684 aa19.54■□□□□ 0.72
VMP1-201ENST00000262291 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
VMP1-201ENST00000262291 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
VMP1-201ENST00000262291 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.722e-7■■■■□ 25.4
VMP1-201ENST00000262291 TONSLQ96HA7 1378 aa19.52■□□□□ 0.72
VMP1-201ENST00000262291 ADCY10Q96PN6 1610 aa19.52■□□□□ 0.72
VMP1-201ENST00000262291 ABCC10Q5T3U5 1492 aa19.51■□□□□ 0.71
VMP1-201ENST00000262291 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
VMP1-201ENST00000262291 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
VMP1-201ENST00000262291 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
VMP1-201ENST00000262291 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
VMP1-201ENST00000262291 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
VMP1-201ENST00000262291 ROCK1Q13464 1354 aa19.46■□□□□ 0.71
VMP1-201ENST00000262291 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
VMP1-201ENST00000262291 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
VMP1-201ENST00000262291 NCOA1Q15788 1441 aa19.43■□□□□ 0.7
VMP1-201ENST00000262291 ABCC2Q92887 1545 aa19.41■□□□□ 0.7
VMP1-201ENST00000262291 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
VMP1-201ENST00000262291 TSPY4P0CV99 314 aa19.39■□□□□ 0.7
VMP1-201ENST00000262291 TSPY10P0CW01 314 aa19.39■□□□□ 0.7
VMP1-201ENST00000262291 ANKRD30AQ9BXX3 1397 aa19.38■□□□□ 0.69
VMP1-201ENST00000262291 TTC37Q6PGP7 1564 aa19.38■□□□□ 0.69
VMP1-201ENST00000262291 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
VMP1-201ENST00000262291 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
VMP1-201ENST00000262291 CDC42BPBQ9Y5S2 1711 aa19.36■□□□□ 0.69
VMP1-201ENST00000262291 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
VMP1-201ENST00000262291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
VMP1-201ENST00000262291 ARHGAP5Q13017 1502 aa19.34■□□□□ 0.69
VMP1-201ENST00000262291 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
VMP1-201ENST00000262291 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
VMP1-201ENST00000262291 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
VMP1-201ENST00000262291 ANKRD50Q9ULJ7 1429 aa19.34■□□□□ 0.69
VMP1-201ENST00000262291 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
VMP1-201ENST00000262291 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
VMP1-201ENST00000262291 ADGRL2O95490 1459 aa19.32■□□□□ 0.68
VMP1-201ENST00000262291 PZPP20742 1482 aa19.32■□□□□ 0.68
VMP1-201ENST00000262291 MBD5Q9P267 1494 aa19.32■□□□□ 0.68
VMP1-201ENST00000262291 PKD2Q13563 968 aa19.31■□□□□ 0.68
VMP1-201ENST00000262291 ANKRD30BQ9BXX2 1392 aa19.31■□□□□ 0.68
VMP1-201ENST00000262291 PREX2Q70Z35 1606 aa19.31■□□□□ 0.68
VMP1-201ENST00000262291 KIF15Q9NS87 1388 aa19.3■□□□□ 0.68
VMP1-201ENST00000262291 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
VMP1-201ENST00000262291 NUP155O75694 1391 aa19.29■□□□□ 0.68
VMP1-201ENST00000262291 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
VMP1-201ENST00000262291 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
VMP1-201ENST00000262291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.671e-6■□□□□ 10.3
VMP1-201ENST00000262291 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
VMP1-201ENST00000262291 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
VMP1-201ENST00000262291 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
VMP1-201ENST00000262291 UHRF1BP1LA0JNW5 1464 aa19.23■□□□□ 0.67
VMP1-201ENST00000262291 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
VMP1-201ENST00000262291 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
VMP1-201ENST00000262291 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
VMP1-201ENST00000262291 RPRD2Q5VT52 1461 aaKnown RBP19.21■□□□□ 0.67
VMP1-201ENST00000262291 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
VMP1-201ENST00000262291 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
VMP1-201ENST00000262291 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
VMP1-201ENST00000262291 PLCH2O75038 1416 aa19.19■□□□□ 0.66
VMP1-201ENST00000262291 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
VMP1-201ENST00000262291 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
VMP1-201ENST00000262291 TRAPPC8Q9Y2L5 1435 aa19.16■□□□□ 0.66
VMP1-201ENST00000262291 TEX14Q8IWB6 1497 aa19.15■□□□□ 0.66
VMP1-201ENST00000262291 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
VMP1-201ENST00000262291 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
VMP1-201ENST00000262291 PLEKHH2Q8IVE3 1493 aa19.13■□□□□ 0.65
VMP1-201ENST00000262291 WDR7Q9Y4E6 1490 aa19.13■□□□□ 0.65
VMP1-201ENST00000262291 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.655e-10■■■■■ 27.7
VMP1-201ENST00000262291 ASXL2Q76L83 1435 aa19.11■□□□□ 0.65
VMP1-201ENST00000262291 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
VMP1-201ENST00000262291 C11orf95C9JLR9 678 aaPredicted RBP19.09■□□□□ 0.65
VMP1-201ENST00000262291 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
VMP1-201ENST00000262291 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.64
VMP1-201ENST00000262291 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.64
VMP1-201ENST00000262291 ABCC1P33527 1531 aa19.07■□□□□ 0.64
VMP1-201ENST00000262291 FAM135AQ9P2D6 1515 aa19.07■□□□□ 0.64
VMP1-201ENST00000262291 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
VMP1-201ENST00000262291 FANCAO15360 1455 aa19.04■□□□□ 0.64
VMP1-201ENST00000262291 MAST1Q9Y2H9 1570 aa19.04■□□□□ 0.64
VMP1-201ENST00000262291 DCAF11Q8TEB1 546 aa19.03■□□□□ 0.64
VMP1-201ENST00000262291 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
VMP1-201ENST00000262291 ANP32CO43423 234 aa19.02■□□□□ 0.64
VMP1-201ENST00000262291 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
VMP1-201ENST00000262291 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
VMP1-201ENST00000262291 PLXNC1O60486 1568 aa18.99■□□□□ 0.63
VMP1-201ENST00000262291 DUOX2Q9NRD8 1548 aa18.99■□□□□ 0.63
VMP1-201ENST00000262291 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
VMP1-201ENST00000262291 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
VMP1-201ENST00000262291 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
VMP1-201ENST00000262291 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
VMP1-201ENST00000262291 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms