RNA–Protein interactions for RNA: ENST00000261854.9

SPPL2A-201, Transcript of signal peptide peptidase like 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL2A, Length 7,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-201ENST00000261854 CHMP4BQ9H444 224 aaKnown RBP17.91■□□□□ 0.46
SPPL2A-201ENST00000261854 CLIP1P30622 1438 aa17.9■□□□□ 0.46
SPPL2A-201ENST00000261854 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.46
SPPL2A-201ENST00000261854 TAF7LQ5H9L4 462 aa17.89■□□□□ 0.45
SPPL2A-201ENST00000261854 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
SPPL2A-201ENST00000261854 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
SPPL2A-201ENST00000261854 A0A0U1RQG5 324 aaPredicted RBP17.87■□□□□ 0.45
SPPL2A-201ENST00000261854 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
SPPL2A-201ENST00000261854 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
SPPL2A-201ENST00000261854 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
SPPL2A-201ENST00000261854 KANK1Q14678 1352 aa17.86■□□□□ 0.45
SPPL2A-201ENST00000261854 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
SPPL2A-201ENST00000261854 MS4A1P11836 297 aa17.84■□□□□ 0.45
SPPL2A-201ENST00000261854 MSNP26038 577 aaKnown RBP17.84■□□□□ 0.45
SPPL2A-201ENST00000261854 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
SPPL2A-201ENST00000261854 TMF1P82094 1093 aa17.83■□□□□ 0.44
SPPL2A-201ENST00000261854 MSH5O43196 834 aa17.82■□□□□ 0.44
SPPL2A-201ENST00000261854 FRAT2O75474 233 aaPredicted RBP17.82■□□□□ 0.44
SPPL2A-201ENST00000261854 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
SPPL2A-201ENST00000261854 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
SPPL2A-201ENST00000261854 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
SPPL2A-201ENST00000261854 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
SPPL2A-201ENST00000261854 RASSF8Q8NHQ8 419 aa17.78■□□□□ 0.44
SPPL2A-201ENST00000261854 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
SPPL2A-201ENST00000261854 HDGFL2Q7Z4V5 671 aaPredicted RBP17.77■□□□□ 0.44
SPPL2A-201ENST00000261854 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.43
SPPL2A-201ENST00000261854 GZF1Q9H116 711 aaPredicted RBP17.75■□□□□ 0.43
SPPL2A-201ENST00000261854 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
SPPL2A-201ENST00000261854 TOMM22Q9NS69 142 aa17.73■□□□□ 0.43
SPPL2A-201ENST00000261854 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
SPPL2A-201ENST00000261854 MARCH6O60337 910 aa17.72■□□□□ 0.43
SPPL2A-201ENST00000261854 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
SPPL2A-201ENST00000261854 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
SPPL2A-201ENST00000261854 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
SPPL2A-201ENST00000261854 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
SPPL2A-201ENST00000261854 RAD21O60216 631 aa17.71■□□□□ 0.43
SPPL2A-201ENST00000261854 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
SPPL2A-201ENST00000261854 U2AF1L5P0DN76 240 aaPredicted RBP17.7■□□□□ 0.42
SPPL2A-201ENST00000261854 U2AF1Q01081 240 aaKnown RBP eCLIP17.7■□□□□ 0.42
SPPL2A-201ENST00000261854 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
SPPL2A-201ENST00000261854 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
SPPL2A-201ENST00000261854 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
SPPL2A-201ENST00000261854 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
SPPL2A-201ENST00000261854 PES1O00541 588 aaKnown RBP17.67■□□□□ 0.42
SPPL2A-201ENST00000261854 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
SPPL2A-201ENST00000261854 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
SPPL2A-201ENST00000261854 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
SPPL2A-201ENST00000261854 SPAG9O60271 1321 aaKnown RBP17.66■□□□□ 0.42
SPPL2A-201ENST00000261854 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
SPPL2A-201ENST00000261854 EVA1CP58658 441 aa17.66■□□□□ 0.42
SPPL2A-201ENST00000261854 FOXD1Q16676 465 aa17.65■□□□□ 0.42
SPPL2A-201ENST00000261854 CEP89Q96ST8 783 aa17.65■□□□□ 0.42
SPPL2A-201ENST00000261854 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
SPPL2A-201ENST00000261854 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
SPPL2A-201ENST00000261854 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
SPPL2A-201ENST00000261854 TNNT3P45378 269 aaPredicted RBP17.64■□□□□ 0.41
SPPL2A-201ENST00000261854 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
SPPL2A-201ENST00000261854 AMPHP49418 695 aa17.62■□□□□ 0.41
SPPL2A-201ENST00000261854 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
SPPL2A-201ENST00000261854 EID1Q9Y6B2 187 aa17.61■□□□□ 0.41
SPPL2A-201ENST00000261854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPPL2A-201ENST00000261854 FBXW7Q969H0 707 aa17.61■□□□□ 0.41
SPPL2A-201ENST00000261854 TPM4P67936 248 aa17.61■□□□□ 0.41
SPPL2A-201ENST00000261854 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
SPPL2A-201ENST00000261854 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
SPPL2A-201ENST00000261854 TCEAL9Q9UHQ7 104 aa17.59■□□□□ 0.41
SPPL2A-201ENST00000261854 CEP162Q5TB80 1403 aa17.59■□□□□ 0.41
SPPL2A-201ENST00000261854 FOXD4L5Q5VV16 416 aaPredicted RBP17.59■□□□□ 0.41
SPPL2A-201ENST00000261854 FOXD4L4Q8WXT5 416 aaPredicted RBP17.59■□□□□ 0.41
SPPL2A-201ENST00000261854 GOLGA6L1Q8N7Z2 621 aa17.58■□□□□ 0.41
SPPL2A-201ENST00000261854 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
SPPL2A-201ENST00000261854 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 SLKQ9H2G2 1235 aaPredicted RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
SPPL2A-201ENST00000261854 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
SPPL2A-201ENST00000261854 CWC22Q9HCG8 908 aaKnown RBP17.56■□□□□ 0.4
SPPL2A-201ENST00000261854 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
SPPL2A-201ENST00000261854 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
SPPL2A-201ENST00000261854 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
SPPL2A-201ENST00000261854 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
SPPL2A-201ENST00000261854 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
SPPL2A-201ENST00000261854 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
SPPL2A-201ENST00000261854 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
SPPL2A-201ENST00000261854 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.4
SPPL2A-201ENST00000261854 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
SPPL2A-201ENST00000261854 PKD2Q13563 968 aa17.51■□□□□ 0.39
SPPL2A-201ENST00000261854 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
SPPL2A-201ENST00000261854 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
SPPL2A-201ENST00000261854 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
SPPL2A-201ENST00000261854 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
SPPL2A-201ENST00000261854 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
SPPL2A-201ENST00000261854 CCAR2Q8N163 923 aaKnown RBP17.49■□□□□ 0.39
SPPL2A-201ENST00000261854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.48■□□□□ 0.39
SPPL2A-201ENST00000261854 KIF3BO15066 747 aa17.47■□□□□ 0.39
SPPL2A-201ENST00000261854 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms