RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
COL8A1-201ENST00000261037 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
COL8A1-201ENST00000261037 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
COL8A1-201ENST00000261037 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
COL8A1-201ENST00000261037 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
COL8A1-201ENST00000261037 MS4A1P11836 297 aa15.49■□□□□ 0.07
COL8A1-201ENST00000261037 CHMP4BQ9H444 224 aaKnown RBP15.49■□□□□ 0.07
COL8A1-201ENST00000261037 HSPA5P11021 654 aaKnown RBP15.48■□□□□ 0.07
COL8A1-201ENST00000261037 GOLGA6L6A8MZA4 724 aa15.48■□□□□ 0.07
COL8A1-201ENST00000261037 CLSTN1O94985 981 aa15.48■□□□□ 0.07
COL8A1-201ENST00000261037 ISY1Q9ULR0 285 aaKnown RBP15.47■□□□□ 0.07
COL8A1-201ENST00000261037 GGT6Q6P531 493 aa15.47■□□□□ 0.07
COL8A1-201ENST00000261037 GOLGA6L4A6NEF3 574 aa15.46■□□□□ 0.07
COL8A1-201ENST00000261037 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
COL8A1-201ENST00000261037 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
COL8A1-201ENST00000261037 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
COL8A1-201ENST00000261037 RTF1Q92541 710 aaKnown RBP15.45■□□□□ 0.06
COL8A1-201ENST00000261037 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
COL8A1-201ENST00000261037 PKD2Q13563 968 aa15.42■□□□□ 0.06
COL8A1-201ENST00000261037 MCCP23508 829 aa15.42■□□□□ 0.06
COL8A1-201ENST00000261037 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
COL8A1-201ENST00000261037 DRC7Q8IY82 874 aa15.41■□□□□ 0.06
COL8A1-201ENST00000261037 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
COL8A1-201ENST00000261037 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
COL8A1-201ENST00000261037 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
COL8A1-201ENST00000261037 HDGFP51858 240 aaKnown RBP15.39■□□□□ 0.05
COL8A1-201ENST00000261037 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
COL8A1-201ENST00000261037 SETD5Q9C0A6 1442 aa15.39■□□□□ 0.05
COL8A1-201ENST00000261037 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
COL8A1-201ENST00000261037 ITPRIPQ8IWB1 547 aa15.38■□□□□ 0.05
COL8A1-201ENST00000261037 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
COL8A1-201ENST00000261037 GNL2Q13823 731 aaKnown RBP15.38■□□□□ 0.05
COL8A1-201ENST00000261037 CSB-PGBD3P0DP91 1061 aa15.37■□□□□ 0.05
COL8A1-201ENST00000261037 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
COL8A1-201ENST00000261037 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
COL8A1-201ENST00000261037 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL8A1-201ENST00000261037 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
COL8A1-201ENST00000261037 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
COL8A1-201ENST00000261037 NRDCO43847 1150 aa15.34■□□□□ 0.05
COL8A1-201ENST00000261037 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
COL8A1-201ENST00000261037 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.05
COL8A1-201ENST00000261037 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
COL8A1-201ENST00000261037 GZF1Q9H116 711 aaPredicted RBP15.32■□□□□ 0.04
COL8A1-201ENST00000261037 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
COL8A1-201ENST00000261037 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
COL8A1-201ENST00000261037 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
COL8A1-201ENST00000261037 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
COL8A1-201ENST00000261037 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
COL8A1-201ENST00000261037 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
COL8A1-201ENST00000261037 CHMP3Q9Y3E7 222 aa15.3■□□□□ 0.04
COL8A1-201ENST00000261037 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
COL8A1-201ENST00000261037 RCAN3Q9UKA8 241 aa15.3■□□□□ 0.04
COL8A1-201ENST00000261037 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
COL8A1-201ENST00000261037 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
COL8A1-201ENST00000261037 ARID3AQ99856 593 aa15.29■□□□□ 0.04
COL8A1-201ENST00000261037 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
COL8A1-201ENST00000261037 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
COL8A1-201ENST00000261037 NUP155O75694 1391 aa15.28■□□□□ 0.04
COL8A1-201ENST00000261037 MFAP1P55081 439 aaKnown RBP15.28■□□□□ 0.04
COL8A1-201ENST00000261037 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
COL8A1-201ENST00000261037 NOL8Q76FK4 1167 aaKnown RBP15.26■□□□□ 0.03
COL8A1-201ENST00000261037 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
COL8A1-201ENST00000261037 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
COL8A1-201ENST00000261037 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
COL8A1-201ENST00000261037 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
COL8A1-201ENST00000261037 FMN1Q68DA7 1419 aa15.25■□□□□ 0.03
COL8A1-201ENST00000261037 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
COL8A1-201ENST00000261037 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
COL8A1-201ENST00000261037 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
COL8A1-201ENST00000261037 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL8A1-201ENST00000261037 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
COL8A1-201ENST00000261037 CLUAP1Q96AJ1 413 aa15.23■□□□□ 0.03
COL8A1-201ENST00000261037 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
COL8A1-201ENST00000261037 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
COL8A1-201ENST00000261037 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
COL8A1-201ENST00000261037 CALD1Q05682 793 aaKnown RBP15.22■□□□□ 0.03
COL8A1-201ENST00000261037 RALBP1Q15311 655 aa15.22■□□□□ 0.03
COL8A1-201ENST00000261037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL8A1-201ENST00000261037 KIF3BO15066 747 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 GBP4Q96PP9 640 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 STK31Q9BXU1 1019 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
COL8A1-201ENST00000261037 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
COL8A1-201ENST00000261037 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
COL8A1-201ENST00000261037 EIF3AQ14152 1382 aaKnown RBP15.2■□□□□ 0.02
COL8A1-201ENST00000261037 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
COL8A1-201ENST00000261037 PDE4CQ08493 712 aa15.18■□□□□ 0.02
COL8A1-201ENST00000261037 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
COL8A1-201ENST00000261037 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
COL8A1-201ENST00000261037 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
COL8A1-201ENST00000261037 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
COL8A1-201ENST00000261037 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
COL8A1-201ENST00000261037 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
COL8A1-201ENST00000261037 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
COL8A1-201ENST00000261037 GPATCH3Q96I76 525 aa15.16■□□□□ 0.02
COL8A1-201ENST00000261037 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
COL8A1-201ENST00000261037 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
COL8A1-201ENST00000261037 AMPHP49418 695 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms