RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 ANKRD30BQ9BXX2 1392 aa32.15■■■□□ 2.74
PREB-201ENST00000260643 IRX6P78412 446 aaPredicted RBP32.14■■■□□ 2.74
PREB-201ENST00000260643 TARBP1Q13395 1621 aaKnown RBP32.14■■■□□ 2.74
PREB-201ENST00000260643 C11orf95C9JLR9 678 aaPredicted RBP32.13■■■□□ 2.73
PREB-201ENST00000260643 TEX14Q8IWB6 1497 aa32.13■■■□□ 2.73
PREB-201ENST00000260643 SPATA31E1Q6ZUB1 1445 aa32.12■■■□□ 2.73
PREB-201ENST00000260643 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
PREB-201ENST00000260643 WDR62O43379 1518 aa32.12■■■□□ 2.73
PREB-201ENST00000260643 IQGAP2Q13576 1575 aa32.11■■■□□ 2.73
PREB-201ENST00000260643 POLR1AO95602 1720 aaPredicted RBP32.1■■■□□ 2.73
PREB-201ENST00000260643 CDK13Q14004 1512 aaKnown RBP32.05■■■□□ 2.72
PREB-201ENST00000260643 DAPK1P53355 1430 aa32.05■■■□□ 2.72
PREB-201ENST00000260643 MRS2Q9HD23 443 aa32.03■■■□□ 2.72
PREB-201ENST00000260643 DNMT1P26358 1616 aaKnown RBP32.03■■■□□ 2.72
PREB-201ENST00000260643 NBPF8Q3BBV2 869 aa32.02■■■□□ 2.72
PREB-201ENST00000260643 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
PREB-201ENST00000260643 KIF7Q2M1P5 1343 aa31.99■■■□□ 2.71
PREB-201ENST00000260643 ABCC5O15440 1437 aa31.98■■■□□ 2.71
PREB-201ENST00000260643 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
PREB-201ENST00000260643 FAM9BQ8IZU0 186 aa31.97■■■□□ 2.71
PREB-201ENST00000260643 FOXD1Q16676 465 aa31.96■■■□□ 2.71
PREB-201ENST00000260643 ERICH6Q7L0X2 663 aa31.9■■■□□ 2.7
PREB-201ENST00000260643 SMG6Q86US8 1419 aaKnown RBP31.89■■■□□ 2.7
PREB-201ENST00000260643 MYT1LQ9UL68 1186 aa31.88■■■□□ 2.69
PREB-201ENST00000260643 MBD5Q9P267 1494 aa31.87■■■□□ 2.69
PREB-201ENST00000260643 DHX29Q7Z478 1369 aaKnown RBP31.85■■■□□ 2.69
PREB-201ENST00000260643 B4GALNT3Q6L9W6 998 aa31.84■■■□□ 2.69
PREB-201ENST00000260643 SLC4A1APQ9BWU0 796 aaKnown RBP31.84■■■□□ 2.69
PREB-201ENST00000260643 PZPP20742 1482 aa31.83■■■□□ 2.69
PREB-201ENST00000260643 RNF123Q5XPI4 1314 aa31.82■■■□□ 2.68
PREB-201ENST00000260643 ARID4BQ4LE39 1312 aaPredicted RBP31.81■■■□□ 2.68
PREB-201ENST00000260643 NUP153P49790 1475 aaKnown RBP31.78■■■□□ 2.68
PREB-201ENST00000260643 KIAA0556O60303 1618 aa31.77■■■□□ 2.68
PREB-201ENST00000260643 DISP1Q96F81 1524 aa31.75■■■□□ 2.67
PREB-201ENST00000260643 ZNF644Q9H582 1327 aaPredicted RBP31.74■■■□□ 2.67
PREB-201ENST00000260643 NUDCQ9Y266 331 aa31.73■■■□□ 2.67
PREB-201ENST00000260643 KIAA0586Q9BVV6 1533 aa31.73■■■□□ 2.67
PREB-201ENST00000260643 KIAA1107Q9UPP5 1409 aa31.72■■■□□ 2.67
PREB-201ENST00000260643 ADGRL2O95490 1459 aa31.72■■■□□ 2.67
PREB-201ENST00000260643 KIF14Q15058 1648 aa31.72■■■□□ 2.67
PREB-201ENST00000260643 RAPGEF6Q8TEU7 1601 aa31.72■■■□□ 2.67
PREB-201ENST00000260643 BCORL1Q5H9F3 1711 aa31.71■■■□□ 2.67
PREB-201ENST00000260643 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.67
PREB-201ENST00000260643 USP47Q96K76 1375 aa31.7■■■□□ 2.66
PREB-201ENST00000260643 KDM5CP41229 1560 aa31.68■■■□□ 2.66
PREB-201ENST00000260643 CAMSAP2Q08AD1 1489 aa31.67■■■□□ 2.66
PREB-201ENST00000260643 ARID3CA6NKF2 412 aa31.66■■■□□ 2.66
PREB-201ENST00000260643 UHRF1BP1Q6BDS2 1440 aa31.65■■■□□ 2.66
PREB-201ENST00000260643 ROCK2O75116 1388 aaKnown RBP31.65■■■□□ 2.66
PREB-201ENST00000260643 ITSN2Q9NZM3 1697 aa31.65■■■□□ 2.66
PREB-201ENST00000260643 TROQ12816 1431 aaPredicted RBP31.64■■■□□ 2.66
PREB-201ENST00000260643 CROCC2H7BZ55 1655 aa31.61■■■□□ 2.65
PREB-201ENST00000260643 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
PREB-201ENST00000260643 RALGAPBQ86X10 1494 aa31.59■■■□□ 2.65
PREB-201ENST00000260643 NOP58Q9Y2X3 529 aaKnown RBP31.58■■■□□ 2.65
PREB-201ENST00000260643 ADCY10Q96PN6 1610 aa31.58■■■□□ 2.65
PREB-201ENST00000260643 PNISRQ8TF01 805 aaKnown RBP31.58■■■□□ 2.65
PREB-201ENST00000260643 GPATCH8Q9UKJ3 1502 aaKnown RBP31.58■■■□□ 2.65
PREB-201ENST00000260643 ARHGEF12Q9NZN5 1544 aa31.54■■■□□ 2.64
PREB-201ENST00000260643 IFT140Q96RY7 1462 aa31.54■■■□□ 2.64
PREB-201ENST00000260643 PRG4Q92954 1404 aaPredicted RBP31.54■■■□□ 2.64
PREB-201ENST00000260643 CFDP1Q9UEE9 299 aaPredicted RBP31.54■■■□□ 2.64
PREB-201ENST00000260643 KTN1Q86UP2 1357 aaKnown RBP31.53■■■□□ 2.64
PREB-201ENST00000260643 LRPPRCP42704 1394 aaKnown RBP31.52■■■□□ 2.64
PREB-201ENST00000260643 ANKRD30AQ9BXX3 1397 aa31.52■■■□□ 2.64
PREB-201ENST00000260643 CCDC136Q96JN2 1154 aa31.51■■■□□ 2.64
PREB-201ENST00000260643 PKD2Q13563 968 aa31.51■■■□□ 2.63
PREB-201ENST00000260643 KIF15Q9NS87 1388 aa31.49■■■□□ 2.63
PREB-201ENST00000260643 GRIN2AQ12879 1464 aa31.47■■■□□ 2.63
PREB-201ENST00000260643 ANKRD50Q9ULJ7 1429 aa31.46■■■□□ 2.63
PREB-201ENST00000260643 BRD4O60885 1362 aaPredicted RBP31.46■■■□□ 2.63
PREB-201ENST00000260643 KDM5DQ9BY66 1539 aa31.46■■■□□ 2.63
PREB-201ENST00000260643 ZNF608Q9ULD9 1512 aaPredicted RBP31.45■■■□□ 2.63
PREB-201ENST00000260643 SHANK2Q9UPX8 1470 aa31.44■■■□□ 2.62
PREB-201ENST00000260643 TMC1Q8TDI8 760 aa31.44■■■□□ 2.62
PREB-201ENST00000260643 DEKP35659 375 aaKnown RBP31.42■■■□□ 2.62
PREB-201ENST00000260643 IPO9Q96P70 1041 aaKnown RBP31.41■■■□□ 2.62
PREB-201ENST00000260643 PAK3O75914 559 aaPredicted RBP31.4■■■□□ 2.62
PREB-201ENST00000260643 RALBP1Q15311 655 aa31.39■■■□□ 2.62
PREB-201ENST00000260643 ZNF326Q5BKZ1 582 aaKnown RBP31.39■■■□□ 2.62
PREB-201ENST00000260643 E9PCH4 1651 aa31.38■■■□□ 2.61
PREB-201ENST00000260643 MYBBP1AQ9BQG0 1328 aaKnown RBP31.38■■■□□ 2.61
PREB-201ENST00000260643 ANP32AP39687 249 aaKnown RBP31.38■■■□□ 2.61
PREB-201ENST00000260643 POLR3GLQ9BT43 218 aa31.37■■■□□ 2.61
PREB-201ENST00000260643 CARD11Q9BXL7 1154 aa31.37■■■□□ 2.61
PREB-201ENST00000260643 CEP170Q5SW79 1584 aa31.35■■■□□ 2.61
PREB-201ENST00000260643 PLB1Q6P1J6 1458 aa31.35■■■□□ 2.61
PREB-201ENST00000260643 PTPRGP23470 1445 aa31.33■■■□□ 2.61
PREB-201ENST00000260643 NUP155O75694 1391 aa31.32■■■□□ 2.6
PREB-201ENST00000260643 CDC42BPAQ5VT25 1732 aa31.3■■■□□ 2.6
PREB-201ENST00000260643 C9orf84Q5VXU9 1444 aa31.29■■■□□ 2.6
PREB-201ENST00000260643 ZNF777Q9ULD5 760 aaPredicted RBP31.29■■■□□ 2.6
PREB-201ENST00000260643 RRP1P56182 461 aaKnown RBP31.28■■■□□ 2.6
PREB-201ENST00000260643 ABCC10Q5T3U5 1492 aa31.28■■■□□ 2.6
PREB-201ENST00000260643 CNGB1Q14028 1251 aaPredicted RBP31.27■■■□□ 2.6
PREB-201ENST00000260643 ST20-MTHFSA0A0A6YYL1 179 aa31.27■■■□□ 2.6
PREB-201ENST00000260643 EIF4G3O43432 1585 aaKnown RBP31.27■■■□□ 2.6
PREB-201ENST00000260643 PDE3BQ13370 1112 aa31.24■■■□□ 2.59
PREB-201ENST00000260643 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
PREB-201ENST00000260643 ZBTB47Q9UFB7 747 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms