RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 YEATS2Q9ULM3 1422 aa27.53■■■□□ 2
CGREF1-201ENST00000260595 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
CGREF1-201ENST00000260595 MAGI2Q86UL8 1455 aa27.52■■■□□ 2
CGREF1-201ENST00000260595 CLIP1P30622 1438 aa27.52■■■□□ 2
CGREF1-201ENST00000260595 MYO5CQ9NQX4 1742 aa27.5■■□□□ 1.99
CGREF1-201ENST00000260595 ZFYVE16Q7Z3T8 1539 aa27.5■■□□□ 1.99
CGREF1-201ENST00000260595 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
CGREF1-201ENST00000260595 MADDQ8WXG6 1647 aa27.45■■□□□ 1.98
CGREF1-201ENST00000260595 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
CGREF1-201ENST00000260595 ARHGAP5Q13017 1502 aa27.43■■□□□ 1.98
CGREF1-201ENST00000260595 SIGLEC1Q9BZZ2 1709 aa27.43■■□□□ 1.98
CGREF1-201ENST00000260595 AFAP1Q8N556 730 aa27.39■■□□□ 1.98
CGREF1-201ENST00000260595 ATP10AO60312 1499 aa27.38■■□□□ 1.97
CGREF1-201ENST00000260595 ZNF518AQ6AHZ1 1483 aa27.38■■□□□ 1.97
CGREF1-201ENST00000260595 CDC42BPBQ9Y5S2 1711 aa27.36■■□□□ 1.97
CGREF1-201ENST00000260595 KDM5CP41229 1560 aa27.35■■□□□ 1.97
CGREF1-201ENST00000260595 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.97
CGREF1-201ENST00000260595 PREX2Q70Z35 1606 aa27.33■■□□□ 1.97
CGREF1-201ENST00000260595 RIMS1Q86UR5 1692 aaKnown RBP27.33■■□□□ 1.97
CGREF1-201ENST00000260595 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
CGREF1-201ENST00000260595 MLECQ14165 292 aa27.31■■□□□ 1.96
CGREF1-201ENST00000260595 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
CGREF1-201ENST00000260595 ABCC1P33527 1531 aa27.28■■□□□ 1.96
CGREF1-201ENST00000260595 MLH3Q9UHC1 1453 aa27.26■■□□□ 1.95
CGREF1-201ENST00000260595 LMTK3Q96Q04 1460 aa27.25■■□□□ 1.95
CGREF1-201ENST00000260595 CDC42BPAQ5VT25 1732 aa27.25■■□□□ 1.95
CGREF1-201ENST00000260595 GPATCH8Q9UKJ3 1502 aaKnown RBP27.25■■□□□ 1.95
CGREF1-201ENST00000260595 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
CGREF1-201ENST00000260595 DIP2CQ9Y2E4 1556 aa27.22■■□□□ 1.95
CGREF1-201ENST00000260595 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
CGREF1-201ENST00000260595 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
CGREF1-201ENST00000260595 ITSN2Q9NZM3 1697 aa27.21■■□□□ 1.95
CGREF1-201ENST00000260595 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
CGREF1-201ENST00000260595 REREQ9P2R6 1566 aa27.19■■□□□ 1.94
CGREF1-201ENST00000260595 FER1L4A9Z1Z3 1794 aa27.18■■□□□ 1.94
CGREF1-201ENST00000260595 ZNF777Q9ULD5 760 aaPredicted RBP27.18■■□□□ 1.94
CGREF1-201ENST00000260595 ABCA6Q8N139 1617 aa27.18■■□□□ 1.94
CGREF1-201ENST00000260595 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
CGREF1-201ENST00000260595 SAMD9LQ8IVG5 1584 aa27.17■■□□□ 1.94
CGREF1-201ENST00000260595 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.94
CGREF1-201ENST00000260595 HNRNPMP52272 730 aaKnown RBP eCLIP27.13■■□□□ 1.93
CGREF1-201ENST00000260595 CFDP1Q9UEE9 299 aaPredicted RBP27.13■■□□□ 1.93
CGREF1-201ENST00000260595 KIDINS220Q9ULH0 1771 aa27.12■■□□□ 1.93
CGREF1-201ENST00000260595 AGLP35573 1532 aa27.12■■□□□ 1.93
CGREF1-201ENST00000260595 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
CGREF1-201ENST00000260595 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
CGREF1-201ENST00000260595 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
CGREF1-201ENST00000260595 HSPA2P54652 639 aa27.11■■□□□ 1.93
CGREF1-201ENST00000260595 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
CGREF1-201ENST00000260595 PLEKHH2Q8IVE3 1493 aa27.06■■□□□ 1.92
CGREF1-201ENST00000260595 EHBP1L1Q8N3D4 1523 aa27.06■■□□□ 1.92
CGREF1-201ENST00000260595 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
CGREF1-201ENST00000260595 TIAM1Q13009 1591 aa27.04■■□□□ 1.92
CGREF1-201ENST00000260595 ZNF644Q9H582 1327 aaPredicted RBP27.02■■□□□ 1.92
CGREF1-201ENST00000260595 ATP7AQ04656 1500 aa26.98■■□□□ 1.91
CGREF1-201ENST00000260595 MBD5Q9P267 1494 aa26.97■■□□□ 1.91
CGREF1-201ENST00000260595 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
CGREF1-201ENST00000260595 ESF1Q9H501 851 aaKnown RBP26.95■■□□□ 1.9
CGREF1-201ENST00000260595 PREX1Q8TCU6 1659 aa26.95■■□□□ 1.9
CGREF1-201ENST00000260595 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
CGREF1-201ENST00000260595 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
CGREF1-201ENST00000260595 C3P01024 1663 aa26.92■■□□□ 1.9
CGREF1-201ENST00000260595 CNTLNQ9NXG0 1405 aa26.92■■□□□ 1.9
CGREF1-201ENST00000260595 A2MP01023 1474 aa26.92■■□□□ 1.9
CGREF1-201ENST00000260595 PLXNC1O60486 1568 aa26.91■■□□□ 1.9
CGREF1-201ENST00000260595 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
CGREF1-201ENST00000260595 FBXO41Q8TF61 875 aa26.89■■□□□ 1.9
CGREF1-201ENST00000260595 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
CGREF1-201ENST00000260595 RTEL1-TNFRSF6BF6WH68 1400 aa26.87■■□□□ 1.89
CGREF1-201ENST00000260595 SETD1BQ9UPS6 1966 aaKnown RBP26.87■■□□□ 1.89
CGREF1-201ENST00000260595 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
CGREF1-201ENST00000260595 LRRC9Q6ZRR7 1453 aa26.84■■□□□ 1.89
CGREF1-201ENST00000260595 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
CGREF1-201ENST00000260595 GGT6Q6P531 493 aa26.81■■□□□ 1.88
CGREF1-201ENST00000260595 MROH2AA6NES4 1674 aa26.8■■□□□ 1.88
CGREF1-201ENST00000260595 KANK4Q5T7N3 995 aaPredicted RBP26.8■■□□□ 1.88
CGREF1-201ENST00000260595 RSPH4AQ5TD94 716 aa26.8■■□□□ 1.88
CGREF1-201ENST00000260595 NPATQ14207 1427 aa26.8■■□□□ 1.88
CGREF1-201ENST00000260595 CCDC141Q6ZP82 1450 aa26.8■■□□□ 1.88
CGREF1-201ENST00000260595 ADGBQ8N7X0 1667 aa26.79■■□□□ 1.88
CGREF1-201ENST00000260595 DHX29Q7Z478 1369 aaKnown RBP26.79■■□□□ 1.88
CGREF1-201ENST00000260595 MAP3K1Q13233 1512 aa26.79■■□□□ 1.88
CGREF1-201ENST00000260595 PPP6R1Q9UPN7 881 aa26.78■■□□□ 1.88
CGREF1-201ENST00000260595 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
CGREF1-201ENST00000260595 DMRT2Q9Y5R5 561 aa26.75■■□□□ 1.87
CGREF1-201ENST00000260595 CLTCQ00610 1675 aaKnown RBP26.74■■□□□ 1.87
CGREF1-201ENST00000260595 CERKQ8TCT0 537 aa26.72■■□□□ 1.87
CGREF1-201ENST00000260595 PTPRKQ15262 1439 aa26.72■■□□□ 1.87
CGREF1-201ENST00000260595 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
CGREF1-201ENST00000260595 PTPRTO14522 1441 aa26.68■■□□□ 1.86
CGREF1-201ENST00000260595 KIF3BO15066 747 aa26.68■■□□□ 1.86
CGREF1-201ENST00000260595 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
CGREF1-201ENST00000260595 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
CGREF1-201ENST00000260595 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
CGREF1-201ENST00000260595 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
CGREF1-201ENST00000260595 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
CGREF1-201ENST00000260595 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
CGREF1-201ENST00000260595 MAST1Q9Y2H9 1570 aa26.59■■□□□ 1.85
CGREF1-201ENST00000260595 MYO3AQ8NEV4 1616 aa26.59■■□□□ 1.85
CGREF1-201ENST00000260595 FAM135AQ9P2D6 1515 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms