RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZMYM4Q5VZL5 1548 aa30.93■■■□□ 2.54
TM6SF1-201ENST00000258909 YEATS2Q9ULM3 1422 aa30.93■■■□□ 2.54
TM6SF1-201ENST00000258909 PTPRMP28827 1452 aa30.9■■■□□ 2.54
TM6SF1-201ENST00000258909 ZFYVE16Q7Z3T8 1539 aa30.9■■■□□ 2.54
TM6SF1-201ENST00000258909 POGZQ7Z3K3 1410 aa30.9■■■□□ 2.54
TM6SF1-201ENST00000258909 MADDQ8WXG6 1647 aa30.89■■■□□ 2.54
TM6SF1-201ENST00000258909 CCDC18Q5T9S5 1454 aa30.88■■■□□ 2.53
TM6SF1-201ENST00000258909 ARHGAP5Q13017 1502 aa30.87■■■□□ 2.53
TM6SF1-201ENST00000258909 SIGLEC1Q9BZZ2 1709 aa30.86■■■□□ 2.53
TM6SF1-201ENST00000258909 MAGI2Q86UL8 1455 aa30.84■■■□□ 2.53
TM6SF1-201ENST00000258909 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
TM6SF1-201ENST00000258909 CDC42BPBQ9Y5S2 1711 aa30.81■■■□□ 2.52
TM6SF1-201ENST00000258909 RIMS1Q86UR5 1692 aaKnown RBP30.79■■■□□ 2.52
TM6SF1-201ENST00000258909 MLECQ14165 292 aa30.78■■■□□ 2.52
TM6SF1-201ENST00000258909 AFAP1Q8N556 730 aa30.77■■■□□ 2.52
TM6SF1-201ENST00000258909 PLPPR3Q6T4P5 718 aa30.75■■■□□ 2.51
TM6SF1-201ENST00000258909 PREX2Q70Z35 1606 aa30.74■■■□□ 2.51
TM6SF1-201ENST00000258909 ZNF518AQ6AHZ1 1483 aa30.74■■■□□ 2.51
TM6SF1-201ENST00000258909 ATP10AO60312 1499 aa30.72■■■□□ 2.51
TM6SF1-201ENST00000258909 MYT1LQ9UL68 1186 aa30.71■■■□□ 2.51
TM6SF1-201ENST00000258909 CDC42BPAQ5VT25 1732 aa30.7■■■□□ 2.51
TM6SF1-201ENST00000258909 KDM5CP41229 1560 aa30.68■■■□□ 2.5
TM6SF1-201ENST00000258909 C9orf84Q5VXU9 1444 aa30.68■■■□□ 2.5
TM6SF1-201ENST00000258909 ARHGEF12Q9NZN5 1544 aa30.67■■■□□ 2.5
TM6SF1-201ENST00000258909 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
TM6SF1-201ENST00000258909 ABCC1P33527 1531 aa30.65■■■□□ 2.5
TM6SF1-201ENST00000258909 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.5
TM6SF1-201ENST00000258909 ZNF777Q9ULD5 760 aaPredicted RBP30.63■■■□□ 2.49
TM6SF1-201ENST00000258909 ITSN2Q9NZM3 1697 aa30.62■■■□□ 2.49
TM6SF1-201ENST00000258909 CEP162Q5TB80 1403 aa30.6■■■□□ 2.49
TM6SF1-201ENST00000258909 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
TM6SF1-201ENST00000258909 LMTK3Q96Q04 1460 aa30.59■■■□□ 2.49
TM6SF1-201ENST00000258909 GPATCH8Q9UKJ3 1502 aaKnown RBP30.58■■■□□ 2.49
TM6SF1-201ENST00000258909 ILDR1Q86SU0 546 aaPredicted RBP30.58■■■□□ 2.49
TM6SF1-201ENST00000258909 MLH3Q9UHC1 1453 aa30.58■■■□□ 2.49
TM6SF1-201ENST00000258909 ABCA6Q8N139 1617 aa30.57■■■□□ 2.49
TM6SF1-201ENST00000258909 MTUS2Q5JR59 1369 aa30.55■■■□□ 2.48
TM6SF1-201ENST00000258909 SAMD9LQ8IVG5 1584 aa30.55■■■□□ 2.48
TM6SF1-201ENST00000258909 CCNB3Q8WWL7 1395 aa30.51■■■□□ 2.47
TM6SF1-201ENST00000258909 KIDINS220Q9ULH0 1771 aa30.51■■■□□ 2.47
TM6SF1-201ENST00000258909 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 HNRNPMP52272 730 aaKnown RBP eCLIP30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 HSPA2P54652 639 aa30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 SYCP2Q9BX26 1530 aa30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 CEBPAP49715 358 aaPredicted RBP30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
TM6SF1-201ENST00000258909 REREQ9P2R6 1566 aa30.48■■■□□ 2.47
TM6SF1-201ENST00000258909 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
TM6SF1-201ENST00000258909 SPAG9O60271 1321 aaKnown RBP30.42■■■□□ 2.46
TM6SF1-201ENST00000258909 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
TM6SF1-201ENST00000258909 AGLP35573 1532 aa30.4■■■□□ 2.46
TM6SF1-201ENST00000258909 KIAA1107Q9UPP5 1409 aa30.39■■■□□ 2.46
TM6SF1-201ENST00000258909 ZNF644Q9H582 1327 aaPredicted RBP30.39■■■□□ 2.45
TM6SF1-201ENST00000258909 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
TM6SF1-201ENST00000258909 ESF1Q9H501 851 aaKnown RBP30.34■■■□□ 2.45
TM6SF1-201ENST00000258909 ATP7AQ04656 1500 aa30.33■■■□□ 2.45
TM6SF1-201ENST00000258909 PREX1Q8TCU6 1659 aa30.33■■■□□ 2.45
TM6SF1-201ENST00000258909 SUPT6HQ7KZ85 1726 aaKnown RBP30.32■■■□□ 2.44
TM6SF1-201ENST00000258909 C3P01024 1663 aa30.31■■■□□ 2.44
TM6SF1-201ENST00000258909 INO80Q9ULG1 1556 aaPredicted RBP30.31■■■□□ 2.44
TM6SF1-201ENST00000258909 NCOA2Q15596 1464 aa30.28■■■□□ 2.44
TM6SF1-201ENST00000258909 VPS8Q8N3P4 1428 aa30.26■■■□□ 2.43
TM6SF1-201ENST00000258909 SETD1BQ9UPS6 1966 aaKnown RBP30.25■■■□□ 2.43
TM6SF1-201ENST00000258909 MBD5Q9P267 1494 aa30.25■■■□□ 2.43
TM6SF1-201ENST00000258909 A2MP01023 1474 aa30.24■■■□□ 2.43
TM6SF1-201ENST00000258909 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
TM6SF1-201ENST00000258909 PLXNC1O60486 1568 aa30.21■■■□□ 2.43
TM6SF1-201ENST00000258909 CNTLNQ9NXG0 1405 aa30.19■■■□□ 2.42
TM6SF1-201ENST00000258909 GGT6Q6P531 493 aa30.17■■■□□ 2.42
TM6SF1-201ENST00000258909 CAMSAP2Q08AD1 1489 aa30.16■■■□□ 2.42
TM6SF1-201ENST00000258909 ADGBQ8N7X0 1667 aa30.16■■■□□ 2.42
TM6SF1-201ENST00000258909 FBXO41Q8TF61 875 aa30.16■■■□□ 2.42
TM6SF1-201ENST00000258909 LRRC9Q6ZRR7 1453 aa30.16■■■□□ 2.42
TM6SF1-201ENST00000258909 CLTCQ00610 1675 aaKnown RBP30.14■■■□□ 2.41
TM6SF1-201ENST00000258909 ZMYM3Q14202 1370 aa30.13■■■□□ 2.41
TM6SF1-201ENST00000258909 MROH2AA6NES4 1674 aa30.13■■■□□ 2.41
TM6SF1-201ENST00000258909 KANK4Q5T7N3 995 aaPredicted RBP30.12■■■□□ 2.41
TM6SF1-201ENST00000258909 STRCQ7RTU9 1775 aa30.12■■■□□ 2.41
TM6SF1-201ENST00000258909 CCDC141Q6ZP82 1450 aa30.11■■■□□ 2.41
TM6SF1-201ENST00000258909 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
TM6SF1-201ENST00000258909 DHX29Q7Z478 1369 aaKnown RBP30.05■■■□□ 2.4
TM6SF1-201ENST00000258909 RSPH4AQ5TD94 716 aa30.04■■■□□ 2.4
TM6SF1-201ENST00000258909 NPATQ14207 1427 aa30.03■■■□□ 2.4
TM6SF1-201ENST00000258909 MAP3K1Q13233 1512 aa30.03■■■□□ 2.4
TM6SF1-201ENST00000258909 DMRT2Q9Y5R5 561 aa30.01■■■□□ 2.4
TM6SF1-201ENST00000258909 ARHGEF5Q12774 1597 aa30.01■■■□□ 2.39
TM6SF1-201ENST00000258909 KIF3BO15066 747 aa30■■■□□ 2.39
TM6SF1-201ENST00000258909 CERKQ8TCT0 537 aa29.99■■■□□ 2.39
TM6SF1-201ENST00000258909 TSPY4P0CV99 314 aa29.99■■■□□ 2.39
TM6SF1-201ENST00000258909 TSPY10P0CW01 314 aa29.99■■■□□ 2.39
TM6SF1-201ENST00000258909 PTPRKQ15262 1439 aa29.97■■■□□ 2.39
TM6SF1-201ENST00000258909 PPP6R1Q9UPN7 881 aa29.97■■■□□ 2.39
TM6SF1-201ENST00000258909 MYOM3Q5VTT5 1437 aa29.94■■■□□ 2.38
TM6SF1-201ENST00000258909 NCOA1Q15788 1441 aa29.92■■■□□ 2.38
TM6SF1-201ENST00000258909 CAMSAP1Q5T5Y3 1602 aa29.92■■■□□ 2.38
TM6SF1-201ENST00000258909 MYO3AQ8NEV4 1616 aa29.92■■■□□ 2.38
TM6SF1-201ENST00000258909 APLP2Q06481 763 aa29.91■■■□□ 2.38
TM6SF1-201ENST00000258909 PTPRTO14522 1441 aa29.9■■■□□ 2.38
TM6SF1-201ENST00000258909 MIA2Q96PC5 1412 aa29.89■■■□□ 2.38
TM6SF1-201ENST00000258909 WASHC2CQ9Y4E1 1318 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 489.9 ms