RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
USPL1-201ENST00000255304 FOXD1Q16676 465 aa10.53□□□□□ -0.72
USPL1-201ENST00000255304 MSH5O43196 834 aa10.52□□□□□ -0.73
USPL1-201ENST00000255304 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
USPL1-201ENST00000255304 RIMBP3CA6NJZ7 1639 aa10.52□□□□□ -0.73
USPL1-201ENST00000255304 RIMBP3BA6NNM3 1639 aa10.52□□□□□ -0.73
USPL1-201ENST00000255304 RIMBP3Q9UFD9 1639 aa10.52□□□□□ -0.73
USPL1-201ENST00000255304 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
USPL1-201ENST00000255304 ABCA8O94911 1581 aa10.51□□□□□ -0.73
USPL1-201ENST00000255304 RAPGEF6Q8TEU7 1601 aa10.5□□□□□ -0.73
USPL1-201ENST00000255304 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
USPL1-201ENST00000255304 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
USPL1-201ENST00000255304 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
USPL1-201ENST00000255304 EFCAB5A4FU69 1503 aa10.48□□□□□ -0.73
USPL1-201ENST00000255304 ATP10BO94823 1461 aa10.48□□□□□ -0.73
USPL1-201ENST00000255304 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
USPL1-201ENST00000255304 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
USPL1-201ENST00000255304 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.73
USPL1-201ENST00000255304 CASKIN1Q8WXD9 1431 aa10.46□□□□□ -0.74
USPL1-201ENST00000255304 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
USPL1-201ENST00000255304 SUPT6HQ7KZ85 1726 aaKnown RBP10.44□□□□□ -0.74
USPL1-201ENST00000255304 KDM6BO15054 1643 aa10.44□□□□□ -0.74
USPL1-201ENST00000255304 TTC37Q6PGP7 1564 aa10.44□□□□□ -0.74
USPL1-201ENST00000255304 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
USPL1-201ENST00000255304 FYCO1Q9BQS8 1478 aa10.43□□□□□ -0.74
USPL1-201ENST00000255304 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
USPL1-201ENST00000255304 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
USPL1-201ENST00000255304 CDC42BPBQ9Y5S2 1711 aa10.42□□□□□ -0.74
USPL1-201ENST00000255304 TSPY4P0CV99 314 aa10.41□□□□□ -0.74
USPL1-201ENST00000255304 TSPY10P0CW01 314 aa10.41□□□□□ -0.74
USPL1-201ENST00000255304 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
USPL1-201ENST00000255304 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
USPL1-201ENST00000255304 CYB5RLQ6IPT4 315 aa10.4□□□□□ -0.74
USPL1-201ENST00000255304 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.74
USPL1-201ENST00000255304 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
USPL1-201ENST00000255304 PTPRGP23470 1445 aa10.38□□□□□ -0.75
USPL1-201ENST00000255304 RTL5Q5HYW3 569 aaPredicted RBP10.38□□□□□ -0.75
USPL1-201ENST00000255304 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
USPL1-201ENST00000255304 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
USPL1-201ENST00000255304 IL27Q8NEV9 243 aa10.37□□□□□ -0.75
USPL1-201ENST00000255304 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
USPL1-201ENST00000255304 HECW1Q76N89 1606 aa10.37□□□□□ -0.75
USPL1-201ENST00000255304 PLEKHD1A6NEE1 506 aa10.36□□□□□ -0.75
USPL1-201ENST00000255304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.36□□□□□ -0.75
USPL1-201ENST00000255304 ARHGEF12Q9NZN5 1544 aa10.35□□□□□ -0.75
USPL1-201ENST00000255304 FMN1Q68DA7 1419 aa10.35□□□□□ -0.75
USPL1-201ENST00000255304 DAXXQ9UER7 740 aaPredicted RBP10.35□□□□□ -0.75
USPL1-201ENST00000255304 ABCC10Q5T3U5 1492 aa10.34□□□□□ -0.75
USPL1-201ENST00000255304 UACAQ9BZF9 1416 aa10.34□□□□□ -0.75
USPL1-201ENST00000255304 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
USPL1-201ENST00000255304 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
USPL1-201ENST00000255304 EIF4G2P78344 907 aaKnown RBP eCLIP10.33□□□□□ -0.76
USPL1-201ENST00000255304 TSPOAP1O95153 1857 aa10.33□□□□□ -0.76
USPL1-201ENST00000255304 KIF13AQ9H1H9 1805 aa10.33□□□□□ -0.76
USPL1-201ENST00000255304 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
USPL1-201ENST00000255304 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
USPL1-201ENST00000255304 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
USPL1-201ENST00000255304 RAB3GAP2Q9H2M9 1393 aa10.31□□□□□ -0.76
USPL1-201ENST00000255304 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
USPL1-201ENST00000255304 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
USPL1-201ENST00000255304 SAMD9LQ8IVG5 1584 aa10.3□□□□□ -0.76
USPL1-201ENST00000255304 RRBP1Q9P2E9 1410 aaKnown RBP10.3□□□□□ -0.76
USPL1-201ENST00000255304 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
USPL1-201ENST00000255304 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
USPL1-201ENST00000255304 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
USPL1-201ENST00000255304 PTPN23Q9H3S7 1636 aa10.28□□□□□ -0.76
USPL1-201ENST00000255304 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
USPL1-201ENST00000255304 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
USPL1-201ENST00000255304 CANXP27824 592 aaKnown RBP10.28□□□□□ -0.76
USPL1-201ENST00000255304 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.76
USPL1-201ENST00000255304 LAS1LQ9Y4W2 734 aaKnown RBP10.27□□□□□ -0.77
USPL1-201ENST00000255304 ASXL2Q76L83 1435 aa10.27□□□□□ -0.77
USPL1-201ENST00000255304 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
USPL1-201ENST00000255304 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
USPL1-201ENST00000255304 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
USPL1-201ENST00000255304 EHBP1L1Q8N3D4 1523 aa10.26□□□□□ -0.77
USPL1-201ENST00000255304 COL17A1Q9UMD9 1497 aaPredicted RBP10.25□□□□□ -0.77
USPL1-201ENST00000255304 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
USPL1-201ENST00000255304 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
USPL1-201ENST00000255304 PREX2Q70Z35 1606 aa10.23□□□□□ -0.77
USPL1-201ENST00000255304 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
USPL1-201ENST00000255304 CC2D1BQ5T0F9 858 aaKnown RBP10.23□□□□□ -0.77
USPL1-201ENST00000255304 NOP58Q9Y2X3 529 aaKnown RBP10.23□□□□□ -0.77
USPL1-201ENST00000255304 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
USPL1-201ENST00000255304 TIMELESSQ9UNS1 1208 aa10.23□□□□□ -0.77
USPL1-201ENST00000255304 MYOM3Q5VTT5 1437 aa10.22□□□□□ -0.77
USPL1-201ENST00000255304 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
USPL1-201ENST00000255304 HNRNPMP52272 730 aaKnown RBP eCLIP10.22□□□□□ -0.77
USPL1-201ENST00000255304 PKD2Q13563 968 aa10.22□□□□□ -0.77
USPL1-201ENST00000255304 MBD5Q9P267 1494 aa10.22□□□□□ -0.77
USPL1-201ENST00000255304 CCDC18Q5T9S5 1454 aa10.21□□□□□ -0.77
USPL1-201ENST00000255304 SYCP2Q9BX26 1530 aa10.21□□□□□ -0.77
USPL1-201ENST00000255304 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.78
USPL1-201ENST00000255304 MLECQ14165 292 aa10.21□□□□□ -0.78
USPL1-201ENST00000255304 SETD5Q9C0A6 1442 aa10.21□□□□□ -0.78
USPL1-201ENST00000255304 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.78
USPL1-201ENST00000255304 MYO5CQ9NQX4 1742 aa10.2□□□□□ -0.78
USPL1-201ENST00000255304 ABCC5O15440 1437 aa10.2□□□□□ -0.78
USPL1-201ENST00000255304 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
USPL1-201ENST00000255304 DIP2BQ9P265 1576 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms