RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 FRMPD1Q5SYB0 1578 aa28.41■■■□□ 2.14
SNRPA1-201ENST00000254193 GPATCH8Q9UKJ3 1502 aaKnown RBP28.38■■■□□ 2.13
SNRPA1-201ENST00000254193 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
SNRPA1-201ENST00000254193 POGZQ7Z3K3 1410 aa28.36■■■□□ 2.13
SNRPA1-201ENST00000254193 ZNF777Q9ULD5 760 aaPredicted RBP28.36■■■□□ 2.13
SNRPA1-201ENST00000254193 EHBP1L1Q8N3D4 1523 aa28.36■■■□□ 2.13
SNRPA1-201ENST00000254193 TIAM1Q13009 1591 aa28.34■■■□□ 2.13
SNRPA1-201ENST00000254193 CFDP1Q9UEE9 299 aaPredicted RBP28.34■■■□□ 2.13
SNRPA1-201ENST00000254193 AFAP1Q8N556 730 aa28.33■■■□□ 2.13
SNRPA1-201ENST00000254193 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
SNRPA1-201ENST00000254193 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
SNRPA1-201ENST00000254193 CDC42BPBQ9Y5S2 1711 aa28.3■■■□□ 2.12
SNRPA1-201ENST00000254193 RICTORQ6R327 1708 aa28.29■■■□□ 2.12
SNRPA1-201ENST00000254193 LRRC9Q6ZRR7 1453 aa28.28■■■□□ 2.12
SNRPA1-201ENST00000254193 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
SNRPA1-201ENST00000254193 YEATS2Q9ULM3 1422 aa28.27■■■□□ 2.12
SNRPA1-201ENST00000254193 APLP2Q06481 763 aa28.27■■■□□ 2.12
SNRPA1-201ENST00000254193 ZMYM4Q5VZL5 1548 aa28.26■■■□□ 2.11
SNRPA1-201ENST00000254193 NCOA2Q15596 1464 aa28.26■■■□□ 2.11
SNRPA1-201ENST00000254193 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.11
SNRPA1-201ENST00000254193 TRAPPC8Q9Y2L5 1435 aa28.26■■■□□ 2.11
SNRPA1-201ENST00000254193 MAP3K1Q13233 1512 aa28.25■■■□□ 2.11
SNRPA1-201ENST00000254193 ZNF518AQ6AHZ1 1483 aa28.25■■■□□ 2.11
SNRPA1-201ENST00000254193 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
SNRPA1-201ENST00000254193 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
SNRPA1-201ENST00000254193 ABCC1P33527 1531 aa28.23■■■□□ 2.11
SNRPA1-201ENST00000254193 ARID4BQ4LE39 1312 aaPredicted RBP28.22■■■□□ 2.11
SNRPA1-201ENST00000254193 ZNF644Q9H582 1327 aaPredicted RBP28.22■■■□□ 2.11
SNRPA1-201ENST00000254193 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
SNRPA1-201ENST00000254193 ZFYVE16Q7Z3T8 1539 aa28.21■■■□□ 2.11
SNRPA1-201ENST00000254193 ARHGEF40Q8TER5 1519 aa28.21■■■□□ 2.11
SNRPA1-201ENST00000254193 SAMD9LQ8IVG5 1584 aa28.19■■■□□ 2.1
SNRPA1-201ENST00000254193 KIAA1107Q9UPP5 1409 aa28.17■■■□□ 2.1
SNRPA1-201ENST00000254193 KDM5CP41229 1560 aa28.16■■■□□ 2.1
SNRPA1-201ENST00000254193 SUPT6HQ7KZ85 1726 aaKnown RBP28.15■■■□□ 2.1
SNRPA1-201ENST00000254193 PLEKHH2Q8IVE3 1493 aa28.15■■■□□ 2.1
SNRPA1-201ENST00000254193 SYCP2Q9BX26 1530 aa28.14■■■□□ 2.1
SNRPA1-201ENST00000254193 ATP10AO60312 1499 aa28.12■■■□□ 2.09
SNRPA1-201ENST00000254193 MLH3Q9UHC1 1453 aa28.11■■■□□ 2.09
SNRPA1-201ENST00000254193 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
SNRPA1-201ENST00000254193 SPAG9O60271 1321 aaKnown RBP28.09■■■□□ 2.09
SNRPA1-201ENST00000254193 C9orf84Q5VXU9 1444 aa28.07■■■□□ 2.08
SNRPA1-201ENST00000254193 HECW2Q9P2P5 1572 aa28.07■■■□□ 2.08
SNRPA1-201ENST00000254193 MLECQ14165 292 aa28.06■■■□□ 2.08
SNRPA1-201ENST00000254193 MBD5Q9P267 1494 aa28.06■■■□□ 2.08
SNRPA1-201ENST00000254193 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
SNRPA1-201ENST00000254193 MYOM3Q5VTT5 1437 aa28.01■■■□□ 2.08
SNRPA1-201ENST00000254193 DIP2CQ9Y2E4 1556 aa28■■■□□ 2.07
SNRPA1-201ENST00000254193 SIGLEC1Q9BZZ2 1709 aa27.99■■■□□ 2.07
SNRPA1-201ENST00000254193 ABCA6Q8N139 1617 aa27.97■■■□□ 2.07
SNRPA1-201ENST00000254193 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
SNRPA1-201ENST00000254193 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
SNRPA1-201ENST00000254193 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
SNRPA1-201ENST00000254193 ADAMTSL3P82987 1691 aa27.96■■■□□ 2.07
SNRPA1-201ENST00000254193 KIDINS220Q9ULH0 1771 aa27.95■■■□□ 2.06
SNRPA1-201ENST00000254193 ATP7AQ04656 1500 aa27.93■■■□□ 2.06
SNRPA1-201ENST00000254193 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
SNRPA1-201ENST00000254193 PTPRMP28827 1452 aa27.91■■■□□ 2.06
SNRPA1-201ENST00000254193 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
SNRPA1-201ENST00000254193 MADDQ8WXG6 1647 aa27.89■■■□□ 2.06
SNRPA1-201ENST00000254193 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
SNRPA1-201ENST00000254193 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
SNRPA1-201ENST00000254193 RTEL1-TNFRSF6BF6WH68 1400 aa27.89■■■□□ 2.06
SNRPA1-201ENST00000254193 INO80Q9ULG1 1556 aaPredicted RBP27.89■■■□□ 2.05
SNRPA1-201ENST00000254193 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
SNRPA1-201ENST00000254193 PLPPR3Q6T4P5 718 aa27.86■■■□□ 2.05
SNRPA1-201ENST00000254193 AGLP35573 1532 aa27.86■■■□□ 2.05
SNRPA1-201ENST00000254193 FGD6Q6ZV73 1430 aa27.85■■■□□ 2.05
SNRPA1-201ENST00000254193 A2MP01023 1474 aa27.85■■■□□ 2.05
SNRPA1-201ENST00000254193 ARHGEF5Q12774 1597 aa27.84■■■□□ 2.05
SNRPA1-201ENST00000254193 DHX29Q7Z478 1369 aaKnown RBP27.78■■■□□ 2.04
SNRPA1-201ENST00000254193 RIMS1Q86UR5 1692 aaKnown RBP27.78■■■□□ 2.04
SNRPA1-201ENST00000254193 PTPN23Q9H3S7 1636 aa27.77■■■□□ 2.04
SNRPA1-201ENST00000254193 CEBPAP49715 358 aaPredicted RBP27.76■■■□□ 2.03
SNRPA1-201ENST00000254193 ESF1Q9H501 851 aaKnown RBP27.76■■■□□ 2.03
SNRPA1-201ENST00000254193 TCOF1Q13428 1488 aaKnown RBP27.76■■■□□ 2.03
SNRPA1-201ENST00000254193 ABCC5O15440 1437 aa27.75■■■□□ 2.03
SNRPA1-201ENST00000254193 PLXNC1O60486 1568 aa27.75■■■□□ 2.03
SNRPA1-201ENST00000254193 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
SNRPA1-201ENST00000254193 GGT6Q6P531 493 aa27.75■■■□□ 2.03
SNRPA1-201ENST00000254193 KIF3BO15066 747 aa27.7■■■□□ 2.02
SNRPA1-201ENST00000254193 DAPK1P53355 1430 aa27.69■■■□□ 2.02
SNRPA1-201ENST00000254193 FER1L4A9Z1Z3 1794 aa27.69■■■□□ 2.02
SNRPA1-201ENST00000254193 MAST1Q9Y2H9 1570 aa27.68■■■□□ 2.02
SNRPA1-201ENST00000254193 ADGBQ8N7X0 1667 aa27.68■■■□□ 2.02
SNRPA1-201ENST00000254193 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
SNRPA1-201ENST00000254193 RRP7BPQ9NSQ0 103 aa27.65■■■□□ 2.02
SNRPA1-201ENST00000254193 SHANK2Q9UPX8 1470 aa27.64■■■□□ 2.02
SNRPA1-201ENST00000254193 CNTLNQ9NXG0 1405 aa27.64■■■□□ 2.02
SNRPA1-201ENST00000254193 PPP6R1Q9UPN7 881 aa27.62■■■□□ 2.01
SNRPA1-201ENST00000254193 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
SNRPA1-201ENST00000254193 DNMT1P26358 1616 aaKnown RBP27.6■■■□□ 2.01
SNRPA1-201ENST00000254193 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
SNRPA1-201ENST00000254193 ANKRD30AQ9BXX3 1397 aa27.56■■■□□ 2
SNRPA1-201ENST00000254193 LMTK3Q96Q04 1460 aa27.55■■■□□ 2
SNRPA1-201ENST00000254193 DUOX2Q9NRD8 1548 aa27.53■■■□□ 2
SNRPA1-201ENST00000254193 NCOA1Q15788 1441 aa27.53■■■□□ 2
SNRPA1-201ENST00000254193 WASHC2CQ9Y4E1 1318 aa27.53■■■□□ 2
SNRPA1-201ENST00000254193 HSPA2P54652 639 aa27.53■■■□□ 2
SNRPA1-201ENST00000254193 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms