RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 OS9Q13438 667 aaPredicted RBP10.05□□□□□ -0.8
USP29-201ENST00000254181 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
USP29-201ENST00000254181 TRIM44Q96DX7 344 aaPredicted RBP10.04□□□□□ -0.8
USP29-201ENST00000254181 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
USP29-201ENST00000254181 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
USP29-201ENST00000254181 CALD1Q05682 793 aaKnown RBP10.03□□□□□ -0.8
USP29-201ENST00000254181 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
USP29-201ENST00000254181 SLC4A3P48751 1232 aa10.02□□□□□ -0.81
USP29-201ENST00000254181 PDCL3Q9H2J4 239 aa10.02□□□□□ -0.81
USP29-201ENST00000254181 RRAGDQ9NQL2 400 aaPredicted RBP10.02□□□□□ -0.81
USP29-201ENST00000254181 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.81
USP29-201ENST00000254181 FTSJ3Q8IY81 847 aaKnown RBP10.01□□□□□ -0.81
USP29-201ENST00000254181 C1orf115Q9H7X2 142 aa10.01□□□□□ -0.81
USP29-201ENST00000254181 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
USP29-201ENST00000254181 KDM4AO75164 1064 aa10□□□□□ -0.81
USP29-201ENST00000254181 SIN3AQ96ST3 1273 aa10□□□□□ -0.81
USP29-201ENST00000254181 FAM13BQ9NYF5 915 aa10□□□□□ -0.81
USP29-201ENST00000254181 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
USP29-201ENST00000254181 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
USP29-201ENST00000254181 DNTTIP2Q5QJE6 756 aaKnown RBP9.99□□□□□ -0.81
USP29-201ENST00000254181 FAM9BQ8IZU0 186 aa9.99□□□□□ -0.81
USP29-201ENST00000254181 CCER2I3L3R5 266 aa9.98□□□□□ -0.81
USP29-201ENST00000254181 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
USP29-201ENST00000254181 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
USP29-201ENST00000254181 NPM3O75607 178 aaKnown RBP9.96□□□□□ -0.81
USP29-201ENST00000254181 NPM1P06748 294 aaKnown RBP eCLIP9.96□□□□□ -0.81
USP29-201ENST00000254181 FRAT2O75474 233 aaPredicted RBP9.95□□□□□ -0.82
USP29-201ENST00000254181 TPM2P07951 284 aa9.95□□□□□ -0.82
USP29-201ENST00000254181 ANAPC15P60006 121 aa9.95□□□□□ -0.82
USP29-201ENST00000254181 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
USP29-201ENST00000254181 FAM193AP78312 1265 aa9.95□□□□□ -0.82
USP29-201ENST00000254181 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
USP29-201ENST00000254181 PTMAP06454 111 aaKnown RBP9.94□□□□□ -0.82
USP29-201ENST00000254181 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
USP29-201ENST00000254181 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
USP29-201ENST00000254181 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
USP29-201ENST00000254181 PDE4AP27815 886 aa9.93□□□□□ -0.82
USP29-201ENST00000254181 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
USP29-201ENST00000254181 GOLGA6L3A6NEY3 463 aa9.92□□□□□ -0.82
USP29-201ENST00000254181 GPATCH11Q8N954 259 aa9.92□□□□□ -0.82
USP29-201ENST00000254181 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
USP29-201ENST00000254181 E9PSI1 815 aa9.91□□□□□ -0.82
USP29-201ENST00000254181 APPP05067 770 aa9.91□□□□□ -0.82
USP29-201ENST00000254181 CHRM1P11229 460 aaPredicted RBP9.9□□□□□ -0.83
USP29-201ENST00000254181 CLCN1P35523 988 aa9.9□□□□□ -0.83
USP29-201ENST00000254181 TCERG1O14776 1098 aaKnown RBP9.89□□□□□ -0.83
USP29-201ENST00000254181 MAP7D2Q96T17 732 aa9.89□□□□□ -0.83
USP29-201ENST00000254181 MYH16Q9H6N6 1097 aa9.89□□□□□ -0.83
USP29-201ENST00000254181 PRDM4Q9UKN5 801 aa9.89□□□□□ -0.83
USP29-201ENST00000254181 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
USP29-201ENST00000254181 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
USP29-201ENST00000254181 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
USP29-201ENST00000254181 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
USP29-201ENST00000254181 POGKQ9P215 609 aa9.86□□□□□ -0.83
USP29-201ENST00000254181 EEA1Q15075 1411 aa9.86□□□□□ -0.83
USP29-201ENST00000254181 MSNP26038 577 aaKnown RBP9.85□□□□□ -0.83
USP29-201ENST00000254181 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
USP29-201ENST00000254181 MRS2Q9HD23 443 aa9.85□□□□□ -0.83
USP29-201ENST00000254181 ESPNB1AK53 854 aa9.84□□□□□ -0.83
USP29-201ENST00000254181 APBB1O00213 710 aa9.84□□□□□ -0.83
USP29-201ENST00000254181 MCCP23508 829 aa9.84□□□□□ -0.83
USP29-201ENST00000254181 IRX3P78415 501 aaPredicted RBP9.84□□□□□ -0.83
USP29-201ENST00000254181 SOX12O15370 315 aa9.83□□□□□ -0.84
USP29-201ENST00000254181 SETQ01105 290 aaPredicted RBP9.83□□□□□ -0.84
USP29-201ENST00000254181 SLKQ9H2G2 1235 aaPredicted RBP9.83□□□□□ -0.84
USP29-201ENST00000254181 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
USP29-201ENST00000254181 SMAP1Q8IYB5 467 aaPredicted RBP9.83□□□□□ -0.84
USP29-201ENST00000254181 RGS22Q8NE09 1264 aa9.82□□□□□ -0.84
USP29-201ENST00000254181 DNAJC2Q99543 621 aaKnown RBP9.82□□□□□ -0.84
USP29-201ENST00000254181 R3HCC1Q9Y3T6 440 aaKnown RBP9.81□□□□□ -0.84
USP29-201ENST00000254181 FOXD1Q16676 465 aa9.8□□□□□ -0.84
USP29-201ENST00000254181 FOXD4L6Q3SYB3 417 aaPredicted RBP9.8□□□□□ -0.84
USP29-201ENST00000254181 FOXD4L3Q6VB84 417 aaPredicted RBP9.8□□□□□ -0.84
USP29-201ENST00000254181 CGNQ9P2M7 1197 aaKnown RBP9.8□□□□□ -0.84
USP29-201ENST00000254181 CENPJQ9HC77 1338 aaPredicted RBP9.79□□□□□ -0.84
USP29-201ENST00000254181 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
USP29-201ENST00000254181 ZNF830Q96NB3 372 aaPredicted RBP9.79□□□□□ -0.84
USP29-201ENST00000254181 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
USP29-201ENST00000254181 BECN1Q14457 450 aa9.78□□□□□ -0.84
USP29-201ENST00000254181 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
USP29-201ENST00000254181 ZNF771Q7L3S4 317 aaPredicted RBP9.78□□□□□ -0.84
USP29-201ENST00000254181 MTERF4Q7Z6M4 381 aaKnown RBP9.78□□□□□ -0.84
USP29-201ENST00000254181 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
USP29-201ENST00000254181 PANK2Q9BZ23 570 aa9.77□□□□□ -0.85
USP29-201ENST00000254181 TNNT3P45378 269 aaPredicted RBP9.77□□□□□ -0.85
USP29-201ENST00000254181 PLEKHD1A6NEE1 506 aa9.75□□□□□ -0.85
USP29-201ENST00000254181 TMCO4Q5TGY1 634 aa9.75□□□□□ -0.85
USP29-201ENST00000254181 XRCC6P12956 609 aaKnown RBP eCLIP9.74□□□□□ -0.85
USP29-201ENST00000254181 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
USP29-201ENST00000254181 PPP1R15AO75807 674 aaPredicted RBP9.74□□□□□ -0.85
USP29-201ENST00000254181 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
USP29-201ENST00000254181 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 MS4A1P11836 297 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 UQCRHLA0A096LP55 91 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 CLGNO14967 610 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 UQCRHP07919 91 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 CBX1P83916 185 aa9.73□□□□□ -0.85
USP29-201ENST00000254181 MRE11P49959 708 aa9.72□□□□□ -0.85
USP29-201ENST00000254181 TAF3Q5VWG9 929 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms