RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 ARHGAP5Q13017 1502 aa23.67■■□□□ 1.38
ATP6V1F-201ENST00000249289 CDC42BPBQ9Y5S2 1711 aa23.67■■□□□ 1.38
ATP6V1F-201ENST00000249289 GPATCH8Q9UKJ3 1502 aaKnown RBP23.66■■□□□ 1.38
ATP6V1F-201ENST00000249289 PHLDB1Q86UU1 1377 aa23.65■■□□□ 1.38
ATP6V1F-201ENST00000249289 KDM6BO15054 1643 aa23.62■■□□□ 1.37
ATP6V1F-201ENST00000249289 EFCAB2Q5VUJ9 269 aa23.61■■□□□ 1.37
ATP6V1F-201ENST00000249289 AKNAQ7Z591 1439 aa23.59■■□□□ 1.37
ATP6V1F-201ENST00000249289 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
ATP6V1F-201ENST00000249289 ADGRL1O94910 1474 aa23.56■■□□□ 1.36
ATP6V1F-201ENST00000249289 CFDP1Q9UEE9 299 aaPredicted RBP23.56■■□□□ 1.36
ATP6V1F-201ENST00000249289 SAMD9LQ8IVG5 1584 aa23.54■■□□□ 1.36
ATP6V1F-201ENST00000249289 ABCC1P33527 1531 aa23.54■■□□□ 1.36
ATP6V1F-201ENST00000249289 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
ATP6V1F-201ENST00000249289 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
ATP6V1F-201ENST00000249289 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
ATP6V1F-201ENST00000249289 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
ATP6V1F-201ENST00000249289 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
ATP6V1F-201ENST00000249289 FRMPD1Q5SYB0 1578 aa23.48■■□□□ 1.35
ATP6V1F-201ENST00000249289 RICTORQ6R327 1708 aa23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 ZNF777Q9ULD5 760 aaPredicted RBP23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 POGZQ7Z3K3 1410 aa23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 SYCP2Q9BX26 1530 aa23.47■■□□□ 1.35
ATP6V1F-201ENST00000249289 FGD6Q6ZV73 1430 aa23.46■■□□□ 1.35
ATP6V1F-201ENST00000249289 ZNF518AQ6AHZ1 1483 aa23.44■■□□□ 1.34
ATP6V1F-201ENST00000249289 PPARGC1BQ86YN6 1023 aaKnown RBP23.44■■□□□ 1.34
ATP6V1F-201ENST00000249289 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
ATP6V1F-201ENST00000249289 PTPN23Q9H3S7 1636 aa23.43■■□□□ 1.34
ATP6V1F-201ENST00000249289 ZMYM4Q5VZL5 1548 aa23.43■■□□□ 1.34
ATP6V1F-201ENST00000249289 KDM5CP41229 1560 aa23.41■■□□□ 1.34
ATP6V1F-201ENST00000249289 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
ATP6V1F-201ENST00000249289 RAPGEF3O95398 923 aa23.4■■□□□ 1.34
ATP6V1F-201ENST00000249289 TCOF1Q13428 1488 aaKnown RBP23.4■■□□□ 1.34
ATP6V1F-201ENST00000249289 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
ATP6V1F-201ENST00000249289 TRAPPC8Q9Y2L5 1435 aa23.38■■□□□ 1.33
ATP6V1F-201ENST00000249289 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
ATP6V1F-201ENST00000249289 HECW2Q9P2P5 1572 aa23.35■■□□□ 1.33
ATP6V1F-201ENST00000249289 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
ATP6V1F-201ENST00000249289 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
ATP6V1F-201ENST00000249289 HNRNPMP52272 730 aaKnown RBP eCLIP23.34■■□□□ 1.33
ATP6V1F-201ENST00000249289 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.32
ATP6V1F-201ENST00000249289 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
ATP6V1F-201ENST00000249289 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
ATP6V1F-201ENST00000249289 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
ATP6V1F-201ENST00000249289 ZFYVE16Q7Z3T8 1539 aa23.31■■□□□ 1.32
ATP6V1F-201ENST00000249289 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
ATP6V1F-201ENST00000249289 INO80Q9ULG1 1556 aaPredicted RBP23.3■■□□□ 1.32
ATP6V1F-201ENST00000249289 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
ATP6V1F-201ENST00000249289 CROCC2H7BZ55 1655 aa23.28■■□□□ 1.32
ATP6V1F-201ENST00000249289 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
ATP6V1F-201ENST00000249289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.317e-12■■□□□ 12.9
ATP6V1F-201ENST00000249289 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
ATP6V1F-201ENST00000249289 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
ATP6V1F-201ENST00000249289 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
ATP6V1F-201ENST00000249289 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
ATP6V1F-201ENST00000249289 MAST1Q9Y2H9 1570 aa23.25■■□□□ 1.31
ATP6V1F-201ENST00000249289 DAPK1P53355 1430 aa23.25■■□□□ 1.31
ATP6V1F-201ENST00000249289 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
ATP6V1F-201ENST00000249289 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
ATP6V1F-201ENST00000249289 ABCA6Q8N139 1617 aa23.23■■□□□ 1.31
ATP6V1F-201ENST00000249289 ABCC5O15440 1437 aa23.23■■□□□ 1.31
ATP6V1F-201ENST00000249289 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
ATP6V1F-201ENST00000249289 MYT1LQ9UL68 1186 aa23.21■■□□□ 1.31
ATP6V1F-201ENST00000249289 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
ATP6V1F-201ENST00000249289 TSPY4P0CV99 314 aa23.2■■□□□ 1.3
ATP6V1F-201ENST00000249289 TSPY10P0CW01 314 aa23.2■■□□□ 1.3
ATP6V1F-201ENST00000249289 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
ATP6V1F-201ENST00000249289 ATP10AO60312 1499 aa23.18■■□□□ 1.3
ATP6V1F-201ENST00000249289 PLXNC1O60486 1568 aa23.17■■□□□ 1.3
ATP6V1F-201ENST00000249289 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
ATP6V1F-201ENST00000249289 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
ATP6V1F-201ENST00000249289 A2MP01023 1474 aa23.1■■□□□ 1.29
ATP6V1F-201ENST00000249289 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
ATP6V1F-201ENST00000249289 AGLP35573 1532 aa23.08■■□□□ 1.29
ATP6V1F-201ENST00000249289 ANKRD30AQ9BXX3 1397 aa23.08■■□□□ 1.29
ATP6V1F-201ENST00000249289 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
ATP6V1F-201ENST00000249289 ROCK1Q13464 1354 aa23.05■■□□□ 1.28
ATP6V1F-201ENST00000249289 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
ATP6V1F-201ENST00000249289 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
ATP6V1F-201ENST00000249289 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
ATP6V1F-201ENST00000249289 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
ATP6V1F-201ENST00000249289 CHIC2Q9UKJ5 165 aa23.04■■□□□ 1.28
ATP6V1F-201ENST00000249289 ITGAEP38570 1179 aa23.03■■□□□ 1.28
ATP6V1F-201ENST00000249289 ARID4BQ4LE39 1312 aaPredicted RBP23.03■■□□□ 1.28
ATP6V1F-201ENST00000249289 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
ATP6V1F-201ENST00000249289 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
ATP6V1F-201ENST00000249289 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
ATP6V1F-201ENST00000249289 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
ATP6V1F-201ENST00000249289 ADAMTSL3P82987 1691 aa22.94■■□□□ 1.26
ATP6V1F-201ENST00000249289 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
ATP6V1F-201ENST00000249289 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
ATP6V1F-201ENST00000249289 ANKRD50Q9ULJ7 1429 aa22.93■■□□□ 1.26
ATP6V1F-201ENST00000249289 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
ATP6V1F-201ENST00000249289 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
ATP6V1F-201ENST00000249289 KIF3BO15066 747 aa22.9■■□□□ 1.26
ATP6V1F-201ENST00000249289 FER1L4A9Z1Z3 1794 aa22.9■■□□□ 1.26
ATP6V1F-201ENST00000249289 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.26
ATP6V1F-201ENST00000249289 MLECQ14165 292 aa22.89■■□□□ 1.25
ATP6V1F-201ENST00000249289 DEPDC5O75140 1603 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms