RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 ZBED9Q6R2W3 1325 aa27.51■■□□□ 1.99
CACTIN-202ENST00000248420 ZNF326Q5BKZ1 582 aaKnown RBP27.5■■□□□ 1.99
CACTIN-202ENST00000248420 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
CACTIN-202ENST00000248420 SLC4A1APQ9BWU0 796 aaKnown RBP27.49■■□□□ 1.99
CACTIN-202ENST00000248420 ERICH6BQ5W0A0 696 aa27.47■■□□□ 1.99
CACTIN-202ENST00000248420 HECW1Q76N89 1606 aa27.46■■□□□ 1.99
CACTIN-202ENST00000248420 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.99
CACTIN-202ENST00000248420 ANKRD30BQ9BXX2 1392 aa27.44■■□□□ 1.98
CACTIN-202ENST00000248420 ABCA5Q8WWZ7 1642 aa27.43■■□□□ 1.98
CACTIN-202ENST00000248420 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
CACTIN-202ENST00000248420 EPRSP07814 1512 aaKnown RBP27.42■■□□□ 1.98
CACTIN-202ENST00000248420 AKNAQ7Z591 1439 aa27.42■■□□□ 1.98
CACTIN-202ENST00000248420 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
CACTIN-202ENST00000248420 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
CACTIN-202ENST00000248420 RPRD2Q5VT52 1461 aaKnown RBP27.36■■□□□ 1.97
CACTIN-202ENST00000248420 NBR1Q14596 966 aa27.35■■□□□ 1.97
CACTIN-202ENST00000248420 PAK3O75914 559 aaPredicted RBP27.34■■□□□ 1.97
CACTIN-202ENST00000248420 SPATA31E1Q6ZUB1 1445 aa27.34■■□□□ 1.97
CACTIN-202ENST00000248420 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
CACTIN-202ENST00000248420 DAPK1P53355 1430 aa27.32■■□□□ 1.96
CACTIN-202ENST00000248420 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
CACTIN-202ENST00000248420 ABCC5O15440 1437 aa27.29■■□□□ 1.96
CACTIN-202ENST00000248420 CCDC136Q96JN2 1154 aa27.28■■□□□ 1.96
CACTIN-202ENST00000248420 ZNF777Q9ULD5 760 aaPredicted RBP27.28■■□□□ 1.96
CACTIN-202ENST00000248420 DEKP35659 375 aaKnown RBP27.26■■□□□ 1.95
CACTIN-202ENST00000248420 NOP58Q9Y2X3 529 aaKnown RBP27.25■■□□□ 1.95
CACTIN-202ENST00000248420 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
CACTIN-202ENST00000248420 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
CACTIN-202ENST00000248420 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
CACTIN-202ENST00000248420 USP47Q96K76 1375 aa27.21■■□□□ 1.95
CACTIN-202ENST00000248420 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
CACTIN-202ENST00000248420 SALL2Q9Y467 1007 aaPredicted RBP27.2■■□□□ 1.94
CACTIN-202ENST00000248420 SMG6Q86US8 1419 aaKnown RBP27.19■■□□□ 1.94
CACTIN-202ENST00000248420 WDR62O43379 1518 aa27.19■■□□□ 1.94
CACTIN-202ENST00000248420 PKD2Q13563 968 aa27.19■■□□□ 1.94
CACTIN-202ENST00000248420 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
CACTIN-202ENST00000248420 TMC1Q8TDI8 760 aa27.18■■□□□ 1.94
CACTIN-202ENST00000248420 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
CACTIN-202ENST00000248420 KDM2AQ9Y2K7 1162 aa27.15■■□□□ 1.94
CACTIN-202ENST00000248420 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.94
CACTIN-202ENST00000248420 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.93
CACTIN-202ENST00000248420 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
CACTIN-202ENST00000248420 BCORL1Q5H9F3 1711 aa27.13■■□□□ 1.93
CACTIN-202ENST00000248420 PZPP20742 1482 aa27.13■■□□□ 1.93
CACTIN-202ENST00000248420 PRG4Q92954 1404 aaPredicted RBP27.09■■□□□ 1.93
CACTIN-202ENST00000248420 DNMT1P26358 1616 aaKnown RBP27.09■■□□□ 1.93
CACTIN-202ENST00000248420 CARD11Q9BXL7 1154 aa27.08■■□□□ 1.93
CACTIN-202ENST00000248420 RNF123Q5XPI4 1314 aa27.07■■□□□ 1.92
CACTIN-202ENST00000248420 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
CACTIN-202ENST00000248420 ANP32AP39687 249 aaKnown RBP27.06■■□□□ 1.92
CACTIN-202ENST00000248420 NPM2Q86SE8 214 aaKnown RBP27.05■■□□□ 1.92
CACTIN-202ENST00000248420 ST20-MTHFSA0A0A6YYL1 179 aa27.04■■□□□ 1.92
CACTIN-202ENST00000248420 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
CACTIN-202ENST00000248420 IPO9Q96P70 1041 aaKnown RBP27.03■■□□□ 1.92
CACTIN-202ENST00000248420 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
CACTIN-202ENST00000248420 POLR1AO95602 1720 aaPredicted RBP27.01■■□□□ 1.91
CACTIN-202ENST00000248420 EXOC6Q8TAG9 804 aa27■■□□□ 1.91
CACTIN-202ENST00000248420 ADAMTS12P58397 1594 aa27■■□□□ 1.91
CACTIN-202ENST00000248420 ZBTB47Q9UFB7 747 aaPredicted RBP26.99■■□□□ 1.91
CACTIN-202ENST00000248420 CAMSAP2Q08AD1 1489 aa26.99■■□□□ 1.91
CACTIN-202ENST00000248420 MBD5Q9P267 1494 aa26.99■■□□□ 1.91
CACTIN-202ENST00000248420 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
CACTIN-202ENST00000248420 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
CACTIN-202ENST00000248420 DCAF11Q8TEB1 546 aa26.97■■□□□ 1.91
CACTIN-202ENST00000248420 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
CACTIN-202ENST00000248420 NUP155O75694 1391 aa26.95■■□□□ 1.9
CACTIN-202ENST00000248420 KDM5CP41229 1560 aa26.92■■□□□ 1.9
CACTIN-202ENST00000248420 RRP1P56182 461 aaKnown RBP26.91■■□□□ 1.9
CACTIN-202ENST00000248420 FBLN2P98095 1184 aa26.9■■□□□ 1.9
CACTIN-202ENST00000248420 PLB1Q6P1J6 1458 aa26.9■■□□□ 1.9
CACTIN-202ENST00000248420 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
CACTIN-202ENST00000248420 SKAP1Q86WV1 359 aa26.9■■□□□ 1.9
CACTIN-202ENST00000248420 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
CACTIN-202ENST00000248420 KIF15Q9NS87 1388 aa26.89■■□□□ 1.9
CACTIN-202ENST00000248420 ANKRD50Q9ULJ7 1429 aa26.89■■□□□ 1.9
CACTIN-202ENST00000248420 CDCA7LQ96GN5 454 aa26.88■■□□□ 1.89
CACTIN-202ENST00000248420 RCAN3Q9UKA8 241 aa26.88■■□□□ 1.89
CACTIN-202ENST00000248420 MYBBP1AQ9BQG0 1328 aaKnown RBP26.88■■□□□ 1.89
CACTIN-202ENST00000248420 ANKRD30AQ9BXX3 1397 aa26.88■■□□□ 1.89
CACTIN-202ENST00000248420 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
CACTIN-202ENST00000248420 RAPGEF6Q8TEU7 1601 aa26.87■■□□□ 1.89
CACTIN-202ENST00000248420 PLIN1O60240 522 aa26.86■■□□□ 1.89
CACTIN-202ENST00000248420 RTL5Q5HYW3 569 aaPredicted RBP26.86■■□□□ 1.89
CACTIN-202ENST00000248420 ARID4BQ4LE39 1312 aaPredicted RBP26.86■■□□□ 1.89
CACTIN-202ENST00000248420 KIF14Q15058 1648 aa26.85■■□□□ 1.89
CACTIN-202ENST00000248420 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
CACTIN-202ENST00000248420 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
CACTIN-202ENST00000248420 LAS1LQ9Y4W2 734 aaKnown RBP26.84■■□□□ 1.89
CACTIN-202ENST00000248420 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
CACTIN-202ENST00000248420 ROCK2O75116 1388 aaKnown RBP26.83■■□□□ 1.89
CACTIN-202ENST00000248420 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
CACTIN-202ENST00000248420 RALBP1Q15311 655 aa26.8■■□□□ 1.88
CACTIN-202ENST00000248420 CC2D1BQ5T0F9 858 aaKnown RBP26.8■■□□□ 1.88
CACTIN-202ENST00000248420 RALGAPBQ86X10 1494 aa26.8■■□□□ 1.88
CACTIN-202ENST00000248420 BRD4O60885 1362 aaPredicted RBP26.8■■□□□ 1.88
CACTIN-202ENST00000248420 PDE4AP27815 886 aa26.79■■□□□ 1.88
CACTIN-202ENST00000248420 NBPF1Q3BBV0 1214 aa26.78■■□□□ 1.88
CACTIN-202ENST00000248420 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.88
CACTIN-202ENST00000248420 TSPY4P0CV99 314 aa26.75■■□□□ 1.87
CACTIN-202ENST00000248420 TSPY10P0CW01 314 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms