RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 LMOD2Q6P5Q4 547 aa9.1□□□□□ -0.95
STAG1-201ENST00000236698 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
STAG1-201ENST00000236698 MTMR7Q9Y216 660 aa9.1□□□□□ -0.95
STAG1-201ENST00000236698 FAM193AP78312 1265 aa9.09□□□□□ -0.95
STAG1-201ENST00000236698 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
STAG1-201ENST00000236698 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
STAG1-201ENST00000236698 BBXQ8WY36 941 aaPredicted RBP9.07□□□□□ -0.96
STAG1-201ENST00000236698 FOXD4L1Q9NU39 408 aa9.06□□□□□ -0.96
STAG1-201ENST00000236698 CADPSQ9ULU8 1353 aa9.06□□□□□ -0.96
STAG1-201ENST00000236698 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
STAG1-201ENST00000236698 WIZO95785 1651 aa9.05□□□□□ -0.96
STAG1-201ENST00000236698 KDM4AO75164 1064 aa9.05□□□□□ -0.96
STAG1-201ENST00000236698 CALRP27797 417 aaKnown RBP9.04□□□□□ -0.96
STAG1-201ENST00000236698 GZF1Q9H116 711 aaPredicted RBP9.04□□□□□ -0.96
STAG1-201ENST00000236698 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
STAG1-201ENST00000236698 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
STAG1-201ENST00000236698 SOGA1O94964 1423 aa9.03□□□□□ -0.96
STAG1-201ENST00000236698 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
STAG1-201ENST00000236698 ANP32AP39687 249 aaKnown RBP9.02□□□□□ -0.96
STAG1-201ENST00000236698 PPP6R1Q9UPN7 881 aa9.02□□□□□ -0.96
STAG1-201ENST00000236698 PDS5BQ9NTI5 1447 aa9.02□□□□□ -0.97
STAG1-201ENST00000236698 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
STAG1-201ENST00000236698 CCDC27Q2M243 656 aa9.01□□□□□ -0.97
STAG1-201ENST00000236698 ANP32CO43423 234 aa9.01□□□□□ -0.97
STAG1-201ENST00000236698 TMX4Q9H1E5 349 aaPredicted RBP9□□□□□ -0.97
STAG1-201ENST00000236698 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
STAG1-201ENST00000236698 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
STAG1-201ENST00000236698 CUX2O14529 1486 aa8.99□□□□□ -0.97
STAG1-201ENST00000236698 CLGNO14967 610 aa8.98□□□□□ -0.97
STAG1-201ENST00000236698 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
STAG1-201ENST00000236698 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
STAG1-201ENST00000236698 CCNB3Q8WWL7 1395 aa8.97□□□□□ -0.97
STAG1-201ENST00000236698 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
STAG1-201ENST00000236698 ECM2O94769 699 aaPredicted RBP8.97□□□□□ -0.97
STAG1-201ENST00000236698 HMGXB3Q12766 1538 aa8.97□□□□□ -0.97
STAG1-201ENST00000236698 MCCP23508 829 aa8.97□□□□□ -0.97
STAG1-201ENST00000236698 L1TD1Q5T7N2 865 aaKnown RBP8.97□□□□□ -0.97
STAG1-201ENST00000236698 HMGB1P1B2RPK0 211 aaPredicted RBP8.96□□□□□ -0.97
STAG1-201ENST00000236698 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.97
STAG1-201ENST00000236698 GORABQ5T7V8 394 aa8.96□□□□□ -0.97
STAG1-201ENST00000236698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.98
STAG1-201ENST00000236698 TEX2Q8IWB9 1127 aa8.96□□□□□ -0.98
STAG1-201ENST00000236698 PPP4R3CPQ6ZMV5 832 aa8.96□□□□□ -0.98
STAG1-201ENST00000236698 NECTIN2Q92692 538 aa8.95□□□□□ -0.98
STAG1-201ENST00000236698 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
STAG1-201ENST00000236698 UPF2Q9HAU5 1272 aaKnown RBP8.95□□□□□ -0.98
STAG1-201ENST00000236698 IPO4Q8TEX9 1081 aaKnown RBP8.95□□□□□ -0.98
STAG1-201ENST00000236698 RAPGEF2Q9Y4G8 1499 aa8.93□□□□□ -0.98
STAG1-201ENST00000236698 HSP90AB4PQ58FF6 505 aa8.93□□□□□ -0.98
STAG1-201ENST00000236698 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
STAG1-201ENST00000236698 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
STAG1-201ENST00000236698 TMED8Q6PL24 325 aaPredicted RBP8.91□□□□□ -0.98
STAG1-201ENST00000236698 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
STAG1-201ENST00000236698 MYH16Q9H6N6 1097 aa8.91□□□□□ -0.98
STAG1-201ENST00000236698 HSP90AA1P07900 732 aaKnown RBP8.91□□□□□ -0.98
STAG1-201ENST00000236698 TSPY4P0CV99 314 aa8.91□□□□□ -0.98
STAG1-201ENST00000236698 TSPY10P0CW01 314 aa8.91□□□□□ -0.98
STAG1-201ENST00000236698 CFTRP13569 1480 aa8.91□□□□□ -0.98
STAG1-201ENST00000236698 GOLGA6L6A8MZA4 724 aa8.9□□□□□ -0.98
STAG1-201ENST00000236698 HSP90AA2PQ14568 343 aaPredicted RBP8.9□□□□□ -0.99
STAG1-201ENST00000236698 NEUROD1Q13562 356 aa8.89□□□□□ -0.99
STAG1-201ENST00000236698 KIF21BO75037 1637 aa8.89□□□□□ -0.99
STAG1-201ENST00000236698 RBM26Q5T8P6 1007 aaKnown RBP8.88□□□□□ -0.99
STAG1-201ENST00000236698 SECISBP2LQ93073 1101 aaKnown RBP8.88□□□□□ -0.99
STAG1-201ENST00000236698 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
STAG1-201ENST00000236698 CC2D1BQ5T0F9 858 aaKnown RBP8.88□□□□□ -0.99
STAG1-201ENST00000236698 FOSBP53539 338 aa8.87□□□□□ -0.99
STAG1-201ENST00000236698 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
STAG1-201ENST00000236698 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
STAG1-201ENST00000236698 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
STAG1-201ENST00000236698 CCDC97Q96F63 343 aaPredicted RBP8.87□□□□□ -0.99
STAG1-201ENST00000236698 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
STAG1-201ENST00000236698 ZNF622Q969S3 477 aaKnown RBP eCLIP8.86□□□□□ -0.99
STAG1-201ENST00000236698 EIF4G1Q04637 1599 aaKnown RBP8.86□□□□□ -0.99
STAG1-201ENST00000236698 CC2D2BQ6DHV5 1058 aa8.85□□□□□ -0.99
STAG1-201ENST00000236698 GOLGA6L22H0YM25 854 aa8.84□□□□□ -0.99
STAG1-201ENST00000236698 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
STAG1-201ENST00000236698 PRDM16Q9HAZ2 1276 aa8.84□□□□□ -0.99
STAG1-201ENST00000236698 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
STAG1-201ENST00000236698 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
STAG1-201ENST00000236698 IL27Q8NEV9 243 aa8.84□□□□□ -0.99
STAG1-201ENST00000236698 AXDND1Q5T1B0 1012 aaPredicted RBP8.83□□□□□ -1
STAG1-201ENST00000236698 ARHGAP35Q9NRY4 1499 aa8.83□□□□□ -1
STAG1-201ENST00000236698 CARMIL2Q6F5E8 1435 aa8.83□□□□□ -1
STAG1-201ENST00000236698 SMARCA5O60264 1052 aaPredicted RBP8.83□□□□□ -1
STAG1-201ENST00000236698 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
STAG1-201ENST00000236698 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
STAG1-201ENST00000236698 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
STAG1-201ENST00000236698 IGF1RP08069 1367 aa8.83□□□□□ -1
STAG1-201ENST00000236698 TRHP20396 242 aaPredicted RBP8.82□□□□□ -1
STAG1-201ENST00000236698 IRX3P78415 501 aaPredicted RBP8.82□□□□□ -1
STAG1-201ENST00000236698 WDR78Q5VTH9 848 aa8.82□□□□□ -1
STAG1-201ENST00000236698 CCDC82Q8N4S0 544 aa8.82□□□□□ -1
STAG1-201ENST00000236698 NRDCO43847 1150 aa8.82□□□□□ -1
STAG1-201ENST00000236698 CASC1Q6TDU7 716 aa8.81□□□□□ -1
STAG1-201ENST00000236698 BICRAQ9NZM4 1560 aa8.81□□□□□ -1
STAG1-201ENST00000236698 PHF14O94880 888 aa8.8□□□□□ -1
STAG1-201ENST00000236698 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
STAG1-201ENST00000236698 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
STAG1-201ENST00000236698 TOP2BQ02880 1626 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms