RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 ZFYVE16Q7Z3T8 1539 aa29.49■■■□□ 2.31
APH1A-201ENST00000236017 YEATS2Q9ULM3 1422 aa29.48■■■□□ 2.31
APH1A-201ENST00000236017 MADDQ8WXG6 1647 aa29.45■■■□□ 2.31
APH1A-201ENST00000236017 MLECQ14165 292 aa29.42■■■□□ 2.3
APH1A-201ENST00000236017 KIF14Q15058 1648 aa29.41■■■□□ 2.3
APH1A-201ENST00000236017 CASKIN1Q8WXD9 1431 aa29.39■■■□□ 2.3
APH1A-201ENST00000236017 PLPPR3Q6T4P5 718 aa29.39■■■□□ 2.3
APH1A-201ENST00000236017 MYO5CQ9NQX4 1742 aa29.37■■■□□ 2.29
APH1A-201ENST00000236017 ATP10AO60312 1499 aa29.37■■■□□ 2.29
APH1A-201ENST00000236017 AFAP1Q8N556 730 aa29.37■■■□□ 2.29
APH1A-201ENST00000236017 MYT1LQ9UL68 1186 aa29.37■■■□□ 2.29
APH1A-201ENST00000236017 ARHGAP5Q13017 1502 aa29.36■■■□□ 2.29
APH1A-201ENST00000236017 CCDC18Q5T9S5 1454 aa29.35■■■□□ 2.29
APH1A-201ENST00000236017 C9orf84Q5VXU9 1444 aa29.33■■■□□ 2.29
APH1A-201ENST00000236017 ZNF518AQ6AHZ1 1483 aa29.33■■■□□ 2.29
APH1A-201ENST00000236017 RIMS1Q86UR5 1692 aaKnown RBP29.33■■■□□ 2.29
APH1A-201ENST00000236017 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
APH1A-201ENST00000236017 LMTK3Q96Q04 1460 aa29.29■■■□□ 2.28
APH1A-201ENST00000236017 LRRIQ1Q96JM4 1722 aa29.25■■■□□ 2.27
APH1A-201ENST00000236017 SIGLEC1Q9BZZ2 1709 aa29.25■■■□□ 2.27
APH1A-201ENST00000236017 HSPA2P54652 639 aa29.23■■■□□ 2.27
APH1A-201ENST00000236017 FYCO1Q9BQS8 1478 aa29.23■■■□□ 2.27
APH1A-201ENST00000236017 KDM5CP41229 1560 aa29.21■■■□□ 2.27
APH1A-201ENST00000236017 FBXO41Q8TF61 875 aa29.2■■■□□ 2.26
APH1A-201ENST00000236017 ARHGEF12Q9NZN5 1544 aa29.2■■■□□ 2.26
APH1A-201ENST00000236017 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
APH1A-201ENST00000236017 TRAPPC8Q9Y2L5 1435 aa29.17■■■□□ 2.26
APH1A-201ENST00000236017 ZNF777Q9ULD5 760 aaPredicted RBP29.16■■■□□ 2.26
APH1A-201ENST00000236017 CDC42BPBQ9Y5S2 1711 aa29.16■■■□□ 2.26
APH1A-201ENST00000236017 CEBPAP49715 358 aaPredicted RBP29.15■■■□□ 2.26
APH1A-201ENST00000236017 FER1L4A9Z1Z3 1794 aa29.14■■■□□ 2.26
APH1A-201ENST00000236017 PREX2Q70Z35 1606 aa29.14■■■□□ 2.26
APH1A-201ENST00000236017 ABCC1P33527 1531 aa29.12■■■□□ 2.25
APH1A-201ENST00000236017 ESF1Q9H501 851 aaKnown RBP29.12■■■□□ 2.25
APH1A-201ENST00000236017 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
APH1A-201ENST00000236017 REREQ9P2R6 1566 aa29.08■■■□□ 2.25
APH1A-201ENST00000236017 CFDP1Q9UEE9 299 aaPredicted RBP29.07■■■□□ 2.24
APH1A-201ENST00000236017 GPATCH8Q9UKJ3 1502 aaKnown RBP29.06■■■□□ 2.24
APH1A-201ENST00000236017 HNRNPMP52272 730 aaKnown RBP eCLIP29.05■■■□□ 2.24
APH1A-201ENST00000236017 MTUS2Q5JR59 1369 aa29.04■■■□□ 2.24
APH1A-201ENST00000236017 AGLP35573 1532 aa29.04■■■□□ 2.24
APH1A-201ENST00000236017 CCNB3Q8WWL7 1395 aa29.03■■■□□ 2.24
APH1A-201ENST00000236017 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
APH1A-201ENST00000236017 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
APH1A-201ENST00000236017 CDC42BPAQ5VT25 1732 aa29.02■■■□□ 2.24
APH1A-201ENST00000236017 ITSN2Q9NZM3 1697 aa29.02■■■□□ 2.24
APH1A-201ENST00000236017 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
APH1A-201ENST00000236017 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
APH1A-201ENST00000236017 UHRF1BP1Q6BDS2 1440 aa28.97■■■□□ 2.23
APH1A-201ENST00000236017 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
APH1A-201ENST00000236017 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
APH1A-201ENST00000236017 KIDINS220Q9ULH0 1771 aa28.95■■■□□ 2.22
APH1A-201ENST00000236017 SYCP2Q9BX26 1530 aa28.94■■■□□ 2.22
APH1A-201ENST00000236017 CNTLNQ9NXG0 1405 aa28.94■■■□□ 2.22
APH1A-201ENST00000236017 PREX1Q8TCU6 1659 aa28.93■■■□□ 2.22
APH1A-201ENST00000236017 CERKQ8TCT0 537 aa28.92■■■□□ 2.22
APH1A-201ENST00000236017 SETD1BQ9UPS6 1966 aaKnown RBP28.9■■■□□ 2.22
APH1A-201ENST00000236017 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
APH1A-201ENST00000236017 ZNF644Q9H582 1327 aaPredicted RBP28.85■■■□□ 2.21
APH1A-201ENST00000236017 ATP7AQ04656 1500 aa28.84■■■□□ 2.21
APH1A-201ENST00000236017 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
APH1A-201ENST00000236017 EHBP1L1Q8N3D4 1523 aa28.83■■■□□ 2.21
APH1A-201ENST00000236017 A2MP01023 1474 aa28.82■■■□□ 2.2
APH1A-201ENST00000236017 C3P01024 1663 aa28.82■■■□□ 2.2
APH1A-201ENST00000236017 GGT6Q6P531 493 aa28.81■■■□□ 2.2
APH1A-201ENST00000236017 PPP6R1Q9UPN7 881 aa28.78■■■□□ 2.2
APH1A-201ENST00000236017 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
APH1A-201ENST00000236017 NPATQ14207 1427 aa28.77■■■□□ 2.2
APH1A-201ENST00000236017 MBD5Q9P267 1494 aa28.76■■■□□ 2.19
APH1A-201ENST00000236017 RSPH4AQ5TD94 716 aa28.75■■■□□ 2.19
APH1A-201ENST00000236017 INO80Q9ULG1 1556 aaPredicted RBP28.75■■■□□ 2.19
APH1A-201ENST00000236017 PTPRTO14522 1441 aa28.74■■■□□ 2.19
APH1A-201ENST00000236017 RTEL1-TNFRSF6BF6WH68 1400 aa28.73■■■□□ 2.19
APH1A-201ENST00000236017 SUPT6HQ7KZ85 1726 aaKnown RBP28.73■■■□□ 2.19
APH1A-201ENST00000236017 STRCQ7RTU9 1775 aa28.72■■■□□ 2.19
APH1A-201ENST00000236017 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
APH1A-201ENST00000236017 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
APH1A-201ENST00000236017 NCOA2Q15596 1464 aa28.69■■■□□ 2.18
APH1A-201ENST00000236017 MROH2AA6NES4 1674 aa28.68■■■□□ 2.18
APH1A-201ENST00000236017 DHX29Q7Z478 1369 aaKnown RBP28.68■■■□□ 2.18
APH1A-201ENST00000236017 NCOA1Q15788 1441 aa28.66■■■□□ 2.18
APH1A-201ENST00000236017 KIF3BO15066 747 aa28.63■■■□□ 2.17
APH1A-201ENST00000236017 TSPY4P0CV99 314 aa28.63■■■□□ 2.17
APH1A-201ENST00000236017 TSPY10P0CW01 314 aa28.63■■■□□ 2.17
APH1A-201ENST00000236017 ADGBQ8N7X0 1667 aa28.63■■■□□ 2.17
APH1A-201ENST00000236017 PTPRKQ15262 1439 aa28.62■■■□□ 2.17
APH1A-201ENST00000236017 CCDC141Q6ZP82 1450 aa28.62■■■□□ 2.17
APH1A-201ENST00000236017 VPS8Q8N3P4 1428 aa28.61■■■□□ 2.17
APH1A-201ENST00000236017 CLTCQ00610 1675 aaKnown RBP28.61■■■□□ 2.17
APH1A-201ENST00000236017 CAMSAP2Q08AD1 1489 aa28.6■■■□□ 2.17
APH1A-201ENST00000236017 NCKAP5LQ9HCH0 1330 aa28.58■■■□□ 2.17
APH1A-201ENST00000236017 CAMSAP1Q5T5Y3 1602 aa28.58■■■□□ 2.17
APH1A-201ENST00000236017 PKD2Q13563 968 aa28.57■■■□□ 2.16
APH1A-201ENST00000236017 LRRC9Q6ZRR7 1453 aa28.55■■■□□ 2.16
APH1A-201ENST00000236017 WASHC2CQ9Y4E1 1318 aa28.52■■■□□ 2.16
APH1A-201ENST00000236017 KANK4Q5T7N3 995 aaPredicted RBP28.5■■■□□ 2.15
APH1A-201ENST00000236017 PLA2R1Q13018 1463 aa28.5■■■□□ 2.15
APH1A-201ENST00000236017 FBXO31Q5XUX0 539 aaPredicted RBP28.48■■■□□ 2.15
APH1A-201ENST00000236017 ARHGEF5Q12774 1597 aa28.48■■■□□ 2.15
APH1A-201ENST00000236017 MYO3AQ8NEV4 1616 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms