RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 STK26Q9P289 416 aa22.14■■□□□ 1.13
SLC1A4-201ENST00000234256 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
SLC1A4-201ENST00000234256 TRIM44Q96DX7 344 aaPredicted RBP22.13■■□□□ 1.13
SLC1A4-201ENST00000234256 SPRYD3Q8NCJ5 442 aa22.13■■□□□ 1.13
SLC1A4-201ENST00000234256 MLECQ14165 292 aa22.12■■□□□ 1.13
SLC1A4-201ENST00000234256 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
SLC1A4-201ENST00000234256 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
SLC1A4-201ENST00000234256 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SLC1A4-201ENST00000234256 GOLGA6L22H0YM25 854 aa22.09■■□□□ 1.13
SLC1A4-201ENST00000234256 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
SLC1A4-201ENST00000234256 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.12
SLC1A4-201ENST00000234256 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
SLC1A4-201ENST00000234256 RALBP1Q15311 655 aa22.04■■□□□ 1.12
SLC1A4-201ENST00000234256 ANKRD30AQ9BXX3 1397 aa22.04■■□□□ 1.12
SLC1A4-201ENST00000234256 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
SLC1A4-201ENST00000234256 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
SLC1A4-201ENST00000234256 ERICH6BQ5W0A0 696 aa22.03■■□□□ 1.12
SLC1A4-201ENST00000234256 CCDC146Q8IYE0 955 aa22.02■■□□□ 1.12
SLC1A4-201ENST00000234256 NLRP13Q86W25 1043 aa22.01■■□□□ 1.11
SLC1A4-201ENST00000234256 CLUAP1Q96AJ1 413 aa22.01■■□□□ 1.11
SLC1A4-201ENST00000234256 KIF3BO15066 747 aa22■■□□□ 1.11
SLC1A4-201ENST00000234256 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
SLC1A4-201ENST00000234256 EFCAB2Q5VUJ9 269 aa21.99■■□□□ 1.11
SLC1A4-201ENST00000234256 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
SLC1A4-201ENST00000234256 APBB1O00213 710 aa21.98■■□□□ 1.11
SLC1A4-201ENST00000234256 GLIPR1L2Q4G1C9 344 aa21.98■■□□□ 1.11
SLC1A4-201ENST00000234256 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
SLC1A4-201ENST00000234256 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
SLC1A4-201ENST00000234256 KANK1Q14678 1352 aa21.98■■□□□ 1.11
SLC1A4-201ENST00000234256 HSP90AB1P08238 724 aaKnown RBP21.97■■□□□ 1.11
SLC1A4-201ENST00000234256 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
SLC1A4-201ENST00000234256 PLIN1O60240 522 aa21.96■■□□□ 1.11
SLC1A4-201ENST00000234256 IGF1RP08069 1367 aa21.94■■□□□ 1.1
SLC1A4-201ENST00000234256 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
SLC1A4-201ENST00000234256 MS4A1P11836 297 aa21.94■■□□□ 1.1
SLC1A4-201ENST00000234256 CASC1Q6TDU7 716 aa21.93■■□□□ 1.1
SLC1A4-201ENST00000234256 PTMAP06454 111 aaKnown RBP21.92■■□□□ 1.1
SLC1A4-201ENST00000234256 GOLGA2Q08379 1002 aa21.92■■□□□ 1.1
SLC1A4-201ENST00000234256 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
SLC1A4-201ENST00000234256 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
SLC1A4-201ENST00000234256 PANK3Q9H999 370 aa21.91■■□□□ 1.1
SLC1A4-201ENST00000234256 TAOK2Q9UL54 1235 aa21.91■■□□□ 1.1
SLC1A4-201ENST00000234256 PLCB2Q00722 1185 aa21.9■■□□□ 1.1
SLC1A4-201ENST00000234256 RRP7AQ9Y3A4 280 aaKnown RBP21.88■■□□□ 1.09
SLC1A4-201ENST00000234256 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
SLC1A4-201ENST00000234256 NAP1L5Q96NT1 182 aaPredicted RBP21.88■■□□□ 1.09
SLC1A4-201ENST00000234256 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
SLC1A4-201ENST00000234256 EXOC6Q8TAG9 804 aa21.87■■□□□ 1.09
SLC1A4-201ENST00000234256 GZF1Q9H116 711 aaPredicted RBP21.87■■□□□ 1.09
SLC1A4-201ENST00000234256 HSCBQ8IWL3 235 aa21.87■■□□□ 1.09
SLC1A4-201ENST00000234256 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
SLC1A4-201ENST00000234256 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
SLC1A4-201ENST00000234256 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
SLC1A4-201ENST00000234256 OS9Q13438 667 aaPredicted RBP21.84■■□□□ 1.09
SLC1A4-201ENST00000234256 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
SLC1A4-201ENST00000234256 DNTTIP2Q5QJE6 756 aaKnown RBP21.84■■□□□ 1.09
SLC1A4-201ENST00000234256 HAP1P54257 671 aaPredicted RBP21.84■■□□□ 1.09
SLC1A4-201ENST00000234256 SLC4A3P48751 1232 aa21.83■■□□□ 1.09
SLC1A4-201ENST00000234256 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
SLC1A4-201ENST00000234256 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
SLC1A4-201ENST00000234256 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
SLC1A4-201ENST00000234256 USP47Q96K76 1375 aa21.81■■□□□ 1.08
SLC1A4-201ENST00000234256 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
SLC1A4-201ENST00000234256 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
SLC1A4-201ENST00000234256 SMC4Q9NTJ3 1288 aa21.8■■□□□ 1.08
SLC1A4-201ENST00000234256 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
SLC1A4-201ENST00000234256 ZBED9Q6R2W3 1325 aa21.79■■□□□ 1.08
SLC1A4-201ENST00000234256 KCNJ4P48050 445 aa21.79■■□□□ 1.08
SLC1A4-201ENST00000234256 RWDD1Q9H446 243 aaPredicted RBP21.79■■□□□ 1.08
SLC1A4-201ENST00000234256 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
SLC1A4-201ENST00000234256 IPO8O15397 1037 aaKnown RBP21.77■■□□□ 1.08
SLC1A4-201ENST00000234256 MFAP1P55081 439 aaKnown RBP21.77■■□□□ 1.08
SLC1A4-201ENST00000234256 KIF21BO75037 1637 aa21.77■■□□□ 1.07
SLC1A4-201ENST00000234256 KIF15Q9NS87 1388 aa21.76■■□□□ 1.07
SLC1A4-201ENST00000234256 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
SLC1A4-201ENST00000234256 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
SLC1A4-201ENST00000234256 PDE4AP27815 886 aa21.75■■□□□ 1.07
SLC1A4-201ENST00000234256 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
SLC1A4-201ENST00000234256 KIF7Q2M1P5 1343 aa21.74■■□□□ 1.07
SLC1A4-201ENST00000234256 APAF1O14727 1248 aa21.74■■□□□ 1.07
SLC1A4-201ENST00000234256 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
SLC1A4-201ENST00000234256 FGD1P98174 961 aa21.73■■□□□ 1.07
SLC1A4-201ENST00000234256 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
SLC1A4-201ENST00000234256 CRBNQ96SW2 442 aa21.73■■□□□ 1.07
SLC1A4-201ENST00000234256 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
SLC1A4-201ENST00000234256 RRP1P56182 461 aaKnown RBP21.73■■□□□ 1.07
SLC1A4-201ENST00000234256 WASHC2AQ641Q2 1341 aa21.72■■□□□ 1.07
SLC1A4-201ENST00000234256 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
SLC1A4-201ENST00000234256 RTF1Q92541 710 aaKnown RBP21.72■■□□□ 1.07
SLC1A4-201ENST00000234256 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
SLC1A4-201ENST00000234256 WASHC2CQ9Y4E1 1318 aa21.71■■□□□ 1.07
SLC1A4-201ENST00000234256 NAP1L2Q9ULW6 460 aaPredicted RBP21.71■■□□□ 1.07
SLC1A4-201ENST00000234256 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
SLC1A4-201ENST00000234256 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
SLC1A4-201ENST00000234256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.7■■□□□ 1.06
SLC1A4-201ENST00000234256 ZRSR1Q15695 479 aaKnown RBP21.69■■□□□ 1.06
SLC1A4-201ENST00000234256 COG6Q9Y2V7 657 aa21.68■■□□□ 1.06
SLC1A4-201ENST00000234256 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
SLC1A4-201ENST00000234256 FOXD4L1Q9NU39 408 aa21.68■■□□□ 1.06
SLC1A4-201ENST00000234256 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms