RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 PREX2Q70Z35 1606 aa27.93■■■□□ 2.06
SNX17-201ENST00000233575 MYO5CQ9NQX4 1742 aa27.89■■■□□ 2.06
SNX17-201ENST00000233575 DNMT1P26358 1616 aaKnown RBP27.86■■■□□ 2.05
SNX17-201ENST00000233575 ARHGAP5Q13017 1502 aa27.84■■■□□ 2.05
SNX17-201ENST00000233575 DAPK1P53355 1430 aa27.84■■■□□ 2.05
SNX17-201ENST00000233575 ABCC5O15440 1437 aa27.84■■■□□ 2.05
SNX17-201ENST00000233575 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
SNX17-201ENST00000233575 CHIC2Q9UKJ5 165 aa27.83■■■□□ 2.05
SNX17-201ENST00000233575 HRCP23327 699 aa27.82■■■□□ 2.04
SNX17-201ENST00000233575 ABCA9Q8IUA7 1624 aa27.81■■■□□ 2.04
SNX17-201ENST00000233575 PLCH2O75038 1416 aa27.81■■■□□ 2.04
SNX17-201ENST00000233575 RAB3GAP2Q9H2M9 1393 aa27.8■■■□□ 2.04
SNX17-201ENST00000233575 SETD5Q9C0A6 1442 aa27.8■■■□□ 2.04
SNX17-201ENST00000233575 CCER1Q8TC90 406 aaPredicted RBP27.8■■■□□ 2.04
SNX17-201ENST00000233575 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
SNX17-201ENST00000233575 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
SNX17-201ENST00000233575 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.03
SNX17-201ENST00000233575 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
SNX17-201ENST00000233575 RRP7BPQ9NSQ0 103 aa27.74■■■□□ 2.03
SNX17-201ENST00000233575 MBD5Q9P267 1494 aa27.73■■■□□ 2.03
SNX17-201ENST00000233575 NAIPQ13075 1403 aa27.73■■■□□ 2.03
SNX17-201ENST00000233575 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
SNX17-201ENST00000233575 AKNAQ7Z591 1439 aa27.7■■■□□ 2.02
SNX17-201ENST00000233575 ARAP3Q8WWN8 1544 aa27.69■■■□□ 2.02
SNX17-201ENST00000233575 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
SNX17-201ENST00000233575 EFCAB2Q5VUJ9 269 aa27.68■■■□□ 2.02
SNX17-201ENST00000233575 GCC2Q8IWJ2 1684 aa27.67■■■□□ 2.02
SNX17-201ENST00000233575 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
SNX17-201ENST00000233575 ROCK1Q13464 1354 aa27.64■■■□□ 2.02
SNX17-201ENST00000233575 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.02
SNX17-201ENST00000233575 FANCAO15360 1455 aa27.64■■■□□ 2.02
SNX17-201ENST00000233575 ABCC1P33527 1531 aa27.64■■■□□ 2.01
SNX17-201ENST00000233575 ADGBQ8N7X0 1667 aa27.63■■■□□ 2.01
SNX17-201ENST00000233575 KIAA1107Q9UPP5 1409 aa27.63■■■□□ 2.01
SNX17-201ENST00000233575 CCDC141Q6ZP82 1450 aa27.63■■■□□ 2.01
SNX17-201ENST00000233575 PLEKHH2Q8IVE3 1493 aa27.63■■■□□ 2.01
SNX17-201ENST00000233575 KDM6BO15054 1643 aa27.63■■■□□ 2.01
SNX17-201ENST00000233575 CD109Q6YHK3 1445 aa27.62■■■□□ 2.01
SNX17-201ENST00000233575 C9orf84Q5VXU9 1444 aa27.62■■■□□ 2.01
SNX17-201ENST00000233575 SHANK2Q9UPX8 1470 aa27.62■■■□□ 2.01
SNX17-201ENST00000233575 ADGRL2O95490 1459 aa27.6■■■□□ 2.01
SNX17-201ENST00000233575 NCOA1Q15788 1441 aa27.6■■■□□ 2.01
SNX17-201ENST00000233575 TSPY4P0CV99 314 aa27.57■■■□□ 2
SNX17-201ENST00000233575 TSPY10P0CW01 314 aa27.57■■■□□ 2
SNX17-201ENST00000233575 TRAPPC8Q9Y2L5 1435 aa27.56■■■□□ 2
SNX17-201ENST00000233575 DIP2BQ9P265 1576 aa27.55■■■□□ 2
SNX17-201ENST00000233575 RSPH4AQ5TD94 716 aa27.55■■■□□ 2
SNX17-201ENST00000233575 ANKRD30AQ9BXX3 1397 aa27.54■■■□□ 2
SNX17-201ENST00000233575 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
SNX17-201ENST00000233575 GLI2P10070 1586 aa27.53■■■□□ 2
SNX17-201ENST00000233575 ADGRL1O94910 1474 aa27.52■■■□□ 2
SNX17-201ENST00000233575 ZEB1P37275 1124 aaPredicted RBP27.5■■□□□ 1.99
SNX17-201ENST00000233575 FAM69CQ0P6D2 419 aa27.5■■□□□ 1.99
SNX17-201ENST00000233575 MAST1Q9Y2H9 1570 aa27.5■■□□□ 1.99
SNX17-201ENST00000233575 SCAPERQ9BY12 1400 aa27.49■■□□□ 1.99
SNX17-201ENST00000233575 AFAP1Q8N556 730 aa27.48■■□□□ 1.99
SNX17-201ENST00000233575 CFAP74Q9C0B2 1584 aa27.46■■□□□ 1.99
SNX17-201ENST00000233575 KIF15Q9NS87 1388 aa27.45■■□□□ 1.99
SNX17-201ENST00000233575 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
SNX17-201ENST00000233575 KIF13AQ9H1H9 1805 aa27.41■■□□□ 1.98
SNX17-201ENST00000233575 PLXNC1O60486 1568 aa27.4■■□□□ 1.98
SNX17-201ENST00000233575 TRIM52Q96A61 297 aa27.4■■□□□ 1.98
SNX17-201ENST00000233575 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
SNX17-201ENST00000233575 TSPOAP1O95153 1857 aa27.39■■□□□ 1.98
SNX17-201ENST00000233575 NEO1Q92859 1461 aa27.39■■□□□ 1.98
SNX17-201ENST00000233575 ZFYVE16Q7Z3T8 1539 aa27.38■■□□□ 1.97
SNX17-201ENST00000233575 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
SNX17-201ENST00000233575 CLSPNQ9HAW4 1339 aa27.37■■□□□ 1.97
SNX17-201ENST00000233575 PPRC1Q5VV67 1664 aaKnown RBP27.37■■□□□ 1.97
SNX17-201ENST00000233575 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
SNX17-201ENST00000233575 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.97
SNX17-201ENST00000233575 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
SNX17-201ENST00000233575 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.97
SNX17-201ENST00000233575 ZNF518AQ6AHZ1 1483 aa27.33■■□□□ 1.97
SNX17-201ENST00000233575 ATP7AQ04656 1500 aa27.33■■□□□ 1.96
SNX17-201ENST00000233575 KDM5CP41229 1560 aa27.28■■□□□ 1.96
SNX17-201ENST00000233575 DUOX2Q9NRD8 1548 aa27.28■■□□□ 1.96
SNX17-201ENST00000233575 KIDINS220Q9ULH0 1771 aa27.28■■□□□ 1.96
SNX17-201ENST00000233575 RAPGEF3O95398 923 aa27.28■■□□□ 1.96
SNX17-201ENST00000233575 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
SNX17-201ENST00000233575 MYT1LQ9UL68 1186 aa27.26■■□□□ 1.95
SNX17-201ENST00000233575 PZPP20742 1482 aa27.25■■□□□ 1.95
SNX17-201ENST00000233575 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
SNX17-201ENST00000233575 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
SNX17-201ENST00000233575 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
SNX17-201ENST00000233575 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
SNX17-201ENST00000233575 ERBINQ96RT1 1412 aa27.22■■□□□ 1.95
SNX17-201ENST00000233575 HECW2Q9P2P5 1572 aa27.21■■□□□ 1.95
SNX17-201ENST00000233575 FOXD1Q16676 465 aa27.21■■□□□ 1.95
SNX17-201ENST00000233575 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
SNX17-201ENST00000233575 NUP155O75694 1391 aa27.2■■□□□ 1.94
SNX17-201ENST00000233575 FRMPD1Q5SYB0 1578 aa27.19■■□□□ 1.94
SNX17-201ENST00000233575 MLH3Q9UHC1 1453 aa27.19■■□□□ 1.94
SNX17-201ENST00000233575 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
SNX17-201ENST00000233575 UNC13BO14795 1591 aa27.17■■□□□ 1.94
SNX17-201ENST00000233575 NEUROD1Q13562 356 aa27.16■■□□□ 1.94
SNX17-201ENST00000233575 ABCA6Q8N139 1617 aa27.14■■□□□ 1.94
SNX17-201ENST00000233575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.12■■□□□ 1.932e-6■□□□□ 10.1
SNX17-201ENST00000233575 DHX29Q7Z478 1369 aaKnown RBP27.12■■□□□ 1.93
SNX17-201ENST00000233575 FAM135AQ9P2D6 1515 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms