RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 CCNB3Q8WWL7 1395 aa30.19■■■□□ 2.42
CENPA-201ENST00000233505 KANK4Q5T7N3 995 aaPredicted RBP30.19■■■□□ 2.42
CENPA-201ENST00000233505 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
CENPA-201ENST00000233505 PREX2Q70Z35 1606 aa30.18■■■□□ 2.42
CENPA-201ENST00000233505 ARHGAP5Q13017 1502 aa30.18■■■□□ 2.42
CENPA-201ENST00000233505 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
CENPA-201ENST00000233505 KDM4FA0A1W2PPD8 638 aa30.13■■■□□ 2.41
CENPA-201ENST00000233505 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
CENPA-201ENST00000233505 DENND4BO75064 1496 aaPredicted RBP30.11■■■□□ 2.41
CENPA-201ENST00000233505 CDC42BPAQ5VT25 1732 aa30.1■■■□□ 2.41
CENPA-201ENST00000233505 CDC42BPBQ9Y5S2 1711 aa30.08■■■□□ 2.41
CENPA-201ENST00000233505 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
CENPA-201ENST00000233505 SCAPERQ9BY12 1400 aa30.06■■■□□ 2.4
CENPA-201ENST00000233505 POGZQ7Z3K3 1410 aa30.05■■■□□ 2.4
CENPA-201ENST00000233505 ITSN2Q9NZM3 1697 aa30.04■■■□□ 2.4
CENPA-201ENST00000233505 ABCC1P33527 1531 aa30.03■■■□□ 2.4
CENPA-201ENST00000233505 FRMPD1Q5SYB0 1578 aa30.03■■■□□ 2.4
CENPA-201ENST00000233505 PLEKHH2Q8IVE3 1493 aa30.02■■■□□ 2.4
CENPA-201ENST00000233505 RAPGEF3O95398 923 aa30.02■■■□□ 2.4
CENPA-201ENST00000233505 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.39
CENPA-201ENST00000233505 SAMD9LQ8IVG5 1584 aa29.98■■■□□ 2.39
CENPA-201ENST00000233505 MYOM3Q5VTT5 1437 aa29.98■■■□□ 2.39
CENPA-201ENST00000233505 ZNF518AQ6AHZ1 1483 aa29.98■■■□□ 2.39
CENPA-201ENST00000233505 ZMYM4Q5VZL5 1548 aa29.97■■■□□ 2.39
CENPA-201ENST00000233505 MIA2Q96PC5 1412 aa29.96■■■□□ 2.39
CENPA-201ENST00000233505 RICTORQ6R327 1708 aa29.96■■■□□ 2.39
CENPA-201ENST00000233505 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
CENPA-201ENST00000233505 ZNF777Q9ULD5 760 aaPredicted RBP29.95■■■□□ 2.39
CENPA-201ENST00000233505 MAGI2Q86UL8 1455 aa29.93■■■□□ 2.38
CENPA-201ENST00000233505 KDM5CP41229 1560 aa29.91■■■□□ 2.38
CENPA-201ENST00000233505 SYCP2Q9BX26 1530 aa29.91■■■□□ 2.38
CENPA-201ENST00000233505 TRAPPC8Q9Y2L5 1435 aa29.9■■■□□ 2.38
CENPA-201ENST00000233505 CAMSAP2Q08AD1 1489 aa29.88■■■□□ 2.37
CENPA-201ENST00000233505 ZNF644Q9H582 1327 aaPredicted RBP29.88■■■□□ 2.37
CENPA-201ENST00000233505 MBD5Q9P267 1494 aa29.87■■■□□ 2.37
CENPA-201ENST00000233505 AFAP1Q8N556 730 aa29.86■■■□□ 2.37
CENPA-201ENST00000233505 FGD6Q6ZV73 1430 aa29.84■■■□□ 2.37
CENPA-201ENST00000233505 MLH3Q9UHC1 1453 aa29.84■■■□□ 2.37
CENPA-201ENST00000233505 ARHGEF40Q8TER5 1519 aa29.84■■■□□ 2.37
CENPA-201ENST00000233505 HNRNPMP52272 730 aaKnown RBP eCLIP29.83■■■□□ 2.37
CENPA-201ENST00000233505 ZFYVE16Q7Z3T8 1539 aa29.81■■■□□ 2.36
CENPA-201ENST00000233505 RSPH4AQ5TD94 716 aa29.81■■■□□ 2.36
CENPA-201ENST00000233505 TCOF1Q13428 1488 aaKnown RBP29.79■■■□□ 2.36
CENPA-201ENST00000233505 HECW2Q9P2P5 1572 aa29.78■■■□□ 2.36
CENPA-201ENST00000233505 CCDC141Q6ZP82 1450 aa29.78■■■□□ 2.36
CENPA-201ENST00000233505 YEATS2Q9ULM3 1422 aa29.78■■■□□ 2.36
CENPA-201ENST00000233505 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
CENPA-201ENST00000233505 SPAG9O60271 1321 aaKnown RBP29.74■■■□□ 2.35
CENPA-201ENST00000233505 PTPN23Q9H3S7 1636 aa29.73■■■□□ 2.35
CENPA-201ENST00000233505 RTEL1-TNFRSF6BF6WH68 1400 aa29.71■■■□□ 2.35
CENPA-201ENST00000233505 ATP10AO60312 1499 aa29.7■■■□□ 2.35
CENPA-201ENST00000233505 INO80Q9ULG1 1556 aaPredicted RBP29.69■■■□□ 2.34
CENPA-201ENST00000233505 ATP7AQ04656 1500 aa29.68■■■□□ 2.34
CENPA-201ENST00000233505 PPARGC1BQ86YN6 1023 aaKnown RBP29.68■■■□□ 2.34
CENPA-201ENST00000233505 C9orf84Q5VXU9 1444 aa29.68■■■□□ 2.34
CENPA-201ENST00000233505 DIP2CQ9Y2E4 1556 aa29.67■■■□□ 2.34
CENPA-201ENST00000233505 REREQ9P2R6 1566 aa29.66■■■□□ 2.34
CENPA-201ENST00000233505 KIDINS220Q9ULH0 1771 aa29.65■■■□□ 2.34
CENPA-201ENST00000233505 MYT1LQ9UL68 1186 aa29.64■■■□□ 2.34
CENPA-201ENST00000233505 ABCA6Q8N139 1617 aa29.63■■■□□ 2.33
CENPA-201ENST00000233505 TSPY4P0CV99 314 aa29.63■■■□□ 2.33
CENPA-201ENST00000233505 TSPY10P0CW01 314 aa29.63■■■□□ 2.33
CENPA-201ENST00000233505 SHANK2Q9UPX8 1470 aa29.62■■■□□ 2.33
CENPA-201ENST00000233505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.62■■■□□ 2.33
CENPA-201ENST00000233505 MAST1Q9Y2H9 1570 aa29.61■■■□□ 2.33
CENPA-201ENST00000233505 ABCC5O15440 1437 aa29.61■■■□□ 2.33
CENPA-201ENST00000233505 ARID4BQ4LE39 1312 aaPredicted RBP29.59■■■□□ 2.33
CENPA-201ENST00000233505 DAPK1P53355 1430 aa29.59■■■□□ 2.33
CENPA-201ENST00000233505 DNMT1P26358 1616 aaKnown RBP29.57■■■□□ 2.32
CENPA-201ENST00000233505 RRBP1Q9P2E9 1410 aaKnown RBP29.57■■■□□ 2.32
CENPA-201ENST00000233505 AGLP35573 1532 aa29.55■■■□□ 2.32
CENPA-201ENST00000233505 FAM50AQ14320 339 aaKnown RBP29.55■■■□□ 2.32
CENPA-201ENST00000233505 A2MP01023 1474 aa29.53■■■□□ 2.32
CENPA-201ENST00000233505 ADAMTSL3P82987 1691 aa29.53■■■□□ 2.32
CENPA-201ENST00000233505 PLXNC1O60486 1568 aa29.52■■■□□ 2.32
CENPA-201ENST00000233505 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.32
CENPA-201ENST00000233505 CROCC2H7BZ55 1655 aa29.49■■■□□ 2.31
CENPA-201ENST00000233505 DHX29Q7Z478 1369 aaKnown RBP29.49■■■□□ 2.31
CENPA-201ENST00000233505 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
CENPA-201ENST00000233505 ADGBQ8N7X0 1667 aa29.47■■■□□ 2.31
CENPA-201ENST00000233505 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
CENPA-201ENST00000233505 PTPRMP28827 1452 aa29.46■■■□□ 2.31
CENPA-201ENST00000233505 ADGRL2O95490 1459 aa29.45■■■□□ 2.31
CENPA-201ENST00000233505 ANKRD30AQ9BXX3 1397 aa29.42■■■□□ 2.3
CENPA-201ENST00000233505 KIF15Q9NS87 1388 aa29.4■■■□□ 2.3
CENPA-201ENST00000233505 NCOA1Q15788 1441 aa29.4■■■□□ 2.3
CENPA-201ENST00000233505 PTPRKQ15262 1439 aa29.38■■■□□ 2.29
CENPA-201ENST00000233505 MLECQ14165 292 aa29.38■■■□□ 2.29
CENPA-201ENST00000233505 DUOX2Q9NRD8 1548 aa29.38■■■□□ 2.29
CENPA-201ENST00000233505 RIMS1Q86UR5 1692 aaKnown RBP29.37■■■□□ 2.29
CENPA-201ENST00000233505 ROCK1Q13464 1354 aa29.37■■■□□ 2.29
CENPA-201ENST00000233505 CHIC2Q9UKJ5 165 aa29.34■■■□□ 2.29
CENPA-201ENST00000233505 ERBINQ96RT1 1412 aa29.34■■■□□ 2.29
CENPA-201ENST00000233505 RRP7BPQ9NSQ0 103 aa29.31■■■□□ 2.28
CENPA-201ENST00000233505 PPP6R1Q9UPN7 881 aa29.31■■■□□ 2.28
CENPA-201ENST00000233505 PLPPR3Q6T4P5 718 aa29.29■■■□□ 2.28
CENPA-201ENST00000233505 EIF2AK4Q9P2K8 1649 aaKnown RBP29.29■■■□□ 2.28
CENPA-201ENST00000233505 KIF3BO15066 747 aa29.27■■■□□ 2.28
CENPA-201ENST00000233505 CNTLNQ9NXG0 1405 aa29.27■■■□□ 2.28
CENPA-201ENST00000233505 FAM135AQ9P2D6 1515 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms