RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 KCNJ4P48050 445 aa9.19□□□□□ -0.94
CPS1-201ENST00000233072 CHAF1AQ13111 956 aaPredicted RBP9.19□□□□□ -0.94
CPS1-201ENST00000233072 RTF1Q92541 710 aaKnown RBP9.19□□□□□ -0.94
CPS1-201ENST00000233072 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
CPS1-201ENST00000233072 HDAC5Q9UQL6 1122 aa9.18□□□□□ -0.94
CPS1-201ENST00000233072 DCAF11Q8TEB1 546 aa9.18□□□□□ -0.94
CPS1-201ENST00000233072 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
CPS1-201ENST00000233072 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
CPS1-201ENST00000233072 PHLDB1Q86UU1 1377 aa9.17□□□□□ -0.94
CPS1-201ENST00000233072 SOGA1O94964 1423 aa9.17□□□□□ -0.94
CPS1-201ENST00000233072 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
CPS1-201ENST00000233072 GOLGA6L4A6NEF3 574 aa9.17□□□□□ -0.94
CPS1-201ENST00000233072 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
CPS1-201ENST00000233072 UACAQ9BZF9 1416 aa9.17□□□□□ -0.94
CPS1-201ENST00000233072 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
CPS1-201ENST00000233072 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
CPS1-201ENST00000233072 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.94
CPS1-201ENST00000233072 RGS3P49796 1198 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 SIN3AQ96ST3 1273 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 MROH2BQ7Z745 1585 aa9.14□□□□□ -0.95
CPS1-201ENST00000233072 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
CPS1-201ENST00000233072 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
CPS1-201ENST00000233072 NAP1L5Q96NT1 182 aaPredicted RBP9.13□□□□□ -0.95
CPS1-201ENST00000233072 HSPA5P11021 654 aaKnown RBP9.13□□□□□ -0.95
CPS1-201ENST00000233072 GBP4Q96PP9 640 aa9.13□□□□□ -0.95
CPS1-201ENST00000233072 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
CPS1-201ENST00000233072 SPAG9O60271 1321 aaKnown RBP9.12□□□□□ -0.95
CPS1-201ENST00000233072 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
CPS1-201ENST00000233072 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
CPS1-201ENST00000233072 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
CPS1-201ENST00000233072 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
CPS1-201ENST00000233072 MSNP26038 577 aaKnown RBP9.12□□□□□ -0.95
CPS1-201ENST00000233072 PKD2Q13563 968 aa9.11□□□□□ -0.95
CPS1-201ENST00000233072 TPM4P67936 248 aa9.11□□□□□ -0.95
CPS1-201ENST00000233072 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
CPS1-201ENST00000233072 NAP1L2Q9ULW6 460 aaPredicted RBP9.1□□□□□ -0.95
CPS1-201ENST00000233072 GNL2Q13823 731 aaKnown RBP9.1□□□□□ -0.95
CPS1-201ENST00000233072 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
CPS1-201ENST00000233072 TCERG1O14776 1098 aaKnown RBP9.1□□□□□ -0.95
CPS1-201ENST00000233072 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
CPS1-201ENST00000233072 CCDC34Q96HJ3 373 aa9.1□□□□□ -0.95
CPS1-201ENST00000233072 NUP155O75694 1391 aa9.09□□□□□ -0.95
CPS1-201ENST00000233072 HMMRO75330 724 aa9.09□□□□□ -0.95
CPS1-201ENST00000233072 TMX4Q9H1E5 349 aaPredicted RBP9.09□□□□□ -0.95
CPS1-201ENST00000233072 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
CPS1-201ENST00000233072 RAB3GAP2Q9H2M9 1393 aa9.09□□□□□ -0.95
CPS1-201ENST00000233072 MPHOSPH9Q99550 1183 aa9.08□□□□□ -0.96
CPS1-201ENST00000233072 CHMP4CQ96CF2 233 aa9.08□□□□□ -0.96
CPS1-201ENST00000233072 SMARCA4P51532 1647 aa9.08□□□□□ -0.96
CPS1-201ENST00000233072 CUX1P39880 1505 aa9.08□□□□□ -0.96
CPS1-201ENST00000233072 PLCB2Q00722 1185 aa9.07□□□□□ -0.96
CPS1-201ENST00000233072 KIF15Q9NS87 1388 aa9.07□□□□□ -0.96
CPS1-201ENST00000233072 USP35Q9P2H5 1018 aa9.07□□□□□ -0.96
CPS1-201ENST00000233072 STK31Q9BXU1 1019 aa9.07□□□□□ -0.96
CPS1-201ENST00000233072 DRC7Q8IY82 874 aa9.07□□□□□ -0.96
CPS1-201ENST00000233072 RCAN3Q9UKA8 241 aa9.06□□□□□ -0.96
CPS1-201ENST00000233072 EID1Q9Y6B2 187 aa9.06□□□□□ -0.96
CPS1-201ENST00000233072 WIZO95785 1651 aa9.06□□□□□ -0.96
CPS1-201ENST00000233072 CADPSQ9ULU8 1353 aa9.06□□□□□ -0.96
CPS1-201ENST00000233072 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
CPS1-201ENST00000233072 GGT6Q6P531 493 aa9.04□□□□□ -0.96
CPS1-201ENST00000233072 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
CPS1-201ENST00000233072 PHF14O94880 888 aa9.03□□□□□ -0.96
CPS1-201ENST00000233072 U2AF1L5P0DN76 240 aaPredicted RBP9.03□□□□□ -0.96
CPS1-201ENST00000233072 U2AF1Q01081 240 aaKnown RBP eCLIP9.03□□□□□ -0.96
CPS1-201ENST00000233072 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
CPS1-201ENST00000233072 KIF3AQ9Y496 699 aa9.03□□□□□ -0.96
CPS1-201ENST00000233072 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
CPS1-201ENST00000233072 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
CPS1-201ENST00000233072 TRHP20396 242 aaPredicted RBP9.02□□□□□ -0.97
CPS1-201ENST00000233072 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
CPS1-201ENST00000233072 MLECQ14165 292 aa9.02□□□□□ -0.97
CPS1-201ENST00000233072 MYBBP1AQ9BQG0 1328 aaKnown RBP9.01□□□□□ -0.97
CPS1-201ENST00000233072 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
CPS1-201ENST00000233072 CLSTN1O94985 981 aa9.01□□□□□ -0.97
CPS1-201ENST00000233072 CENPJQ9HC77 1338 aaPredicted RBP9.01□□□□□ -0.97
CPS1-201ENST00000233072 STK26Q9P289 416 aa9.01□□□□□ -0.97
CPS1-201ENST00000233072 FHOD3Q2V2M9 1422 aa9□□□□□ -0.97
CPS1-201ENST00000233072 NGEFQ8N5V2 710 aa9□□□□□ -0.97
CPS1-201ENST00000233072 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
CPS1-201ENST00000233072 PAK3O75914 559 aaPredicted RBP8.99□□□□□ -0.97
CPS1-201ENST00000233072 GORABQ5T7V8 394 aa8.99□□□□□ -0.97
CPS1-201ENST00000233072 ATAD2BQ9ULI0 1458 aa8.99□□□□□ -0.97
CPS1-201ENST00000233072 TAF7LQ5H9L4 462 aa8.99□□□□□ -0.97
CPS1-201ENST00000233072 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
CPS1-201ENST00000233072 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
CPS1-201ENST00000233072 ISY1Q9ULR0 285 aaKnown RBP8.98□□□□□ -0.97
CPS1-201ENST00000233072 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
CPS1-201ENST00000233072 TDRD9Q8NDG6 1382 aaKnown RBP8.98□□□□□ -0.97
CPS1-201ENST00000233072 ST18O60284 1047 aa8.98□□□□□ -0.97
CPS1-201ENST00000233072 SAFB2Q14151 953 aaKnown RBP eCLIP8.98□□□□□ -0.97
CPS1-201ENST00000233072 STAC3Q96MF2 364 aa8.98□□□□□ -0.97
CPS1-201ENST00000233072 WASHC2CQ9Y4E1 1318 aa8.98□□□□□ -0.97
CPS1-201ENST00000233072 LRRFIP1Q32MZ4 808 aaKnown RBP8.98□□□□□ -0.97
CPS1-201ENST00000233072 DDX11L8A8MPP1 907 aa8.97□□□□□ -0.97
CPS1-201ENST00000233072 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
CPS1-201ENST00000233072 KIF3BO15066 747 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms