RNA–Protein interactions for RNA: ENST00000229022.7

VDR-201, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-201ENST00000229022 NUP155O75694 1391 aa16.73■□□□□ 0.27
VDR-201ENST00000229022 A0A0G2JS52 829 aa16.72■□□□□ 0.27
VDR-201ENST00000229022 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
VDR-201ENST00000229022 CDK11BP21127 795 aaKnown RBP16.7■□□□□ 0.26
VDR-201ENST00000229022 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
VDR-201ENST00000229022 ROCK2O75116 1388 aaKnown RBP16.68■□□□□ 0.26
VDR-201ENST00000229022 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
VDR-201ENST00000229022 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
VDR-201ENST00000229022 WIZO95785 1651 aa16.67■□□□□ 0.26
VDR-201ENST00000229022 CALD1Q05682 793 aaKnown RBP16.66■□□□□ 0.26
VDR-201ENST00000229022 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
VDR-201ENST00000229022 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
VDR-201ENST00000229022 HSP90AB1P08238 724 aaKnown RBP16.66■□□□□ 0.26
VDR-201ENST00000229022 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
VDR-201ENST00000229022 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
VDR-201ENST00000229022 FOXD1Q16676 465 aa16.64■□□□□ 0.25
VDR-201ENST00000229022 GGT6Q6P531 493 aa16.64■□□□□ 0.25
VDR-201ENST00000229022 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
VDR-201ENST00000229022 PDE3BQ13370 1112 aa16.63■□□□□ 0.25
VDR-201ENST00000229022 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
VDR-201ENST00000229022 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
VDR-201ENST00000229022 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
VDR-201ENST00000229022 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
VDR-201ENST00000229022 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
VDR-201ENST00000229022 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
VDR-201ENST00000229022 NLRP13Q86W25 1043 aa16.61■□□□□ 0.25
VDR-201ENST00000229022 RBM19Q9Y4C8 960 aaKnown RBP16.61■□□□□ 0.25
VDR-201ENST00000229022 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
VDR-201ENST00000229022 MCCP23508 829 aa16.59■□□□□ 0.25
VDR-201ENST00000229022 KCNJ4P48050 445 aa16.58■□□□□ 0.25
VDR-201ENST00000229022 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.25
VDR-201ENST00000229022 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
VDR-201ENST00000229022 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
VDR-201ENST00000229022 FGD1P98174 961 aa16.57■□□□□ 0.24
VDR-201ENST00000229022 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
VDR-201ENST00000229022 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
VDR-201ENST00000229022 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
VDR-201ENST00000229022 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
VDR-201ENST00000229022 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
VDR-201ENST00000229022 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
VDR-201ENST00000229022 NRDCO43847 1150 aa16.54■□□□□ 0.24
VDR-201ENST00000229022 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
VDR-201ENST00000229022 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
VDR-201ENST00000229022 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
VDR-201ENST00000229022 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
VDR-201ENST00000229022 KIF3BO15066 747 aa16.53■□□□□ 0.24
VDR-201ENST00000229022 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
VDR-201ENST00000229022 STK26Q9P289 416 aa16.52■□□□□ 0.24
VDR-201ENST00000229022 PTMSP20962 102 aa16.52■□□□□ 0.24
VDR-201ENST00000229022 MLECQ14165 292 aa16.52■□□□□ 0.24
VDR-201ENST00000229022 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.24
VDR-201ENST00000229022 GOLGA6L6A8MZA4 724 aa16.52■□□□□ 0.23
VDR-201ENST00000229022 GOLGA6L4A6NEF3 574 aa16.51■□□□□ 0.23
VDR-201ENST00000229022 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
VDR-201ENST00000229022 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
VDR-201ENST00000229022 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
VDR-201ENST00000229022 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
VDR-201ENST00000229022 GBP4Q96PP9 640 aa16.46■□□□□ 0.22
VDR-201ENST00000229022 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.22
VDR-201ENST00000229022 SOX12O15370 315 aa16.45■□□□□ 0.22
VDR-201ENST00000229022 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
VDR-201ENST00000229022 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
VDR-201ENST00000229022 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
VDR-201ENST00000229022 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
VDR-201ENST00000229022 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
VDR-201ENST00000229022 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
VDR-201ENST00000229022 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
VDR-201ENST00000229022 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
VDR-201ENST00000229022 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
VDR-201ENST00000229022 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
VDR-201ENST00000229022 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
VDR-201ENST00000229022 HMMRO75330 724 aa16.42■□□□□ 0.22
VDR-201ENST00000229022 ST20-MTHFSA0A0A6YYL1 179 aa16.41■□□□□ 0.22
VDR-201ENST00000229022 NPHP1O15259 732 aa16.41■□□□□ 0.22
VDR-201ENST00000229022 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
VDR-201ENST00000229022 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
VDR-201ENST00000229022 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
VDR-201ENST00000229022 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
VDR-201ENST00000229022 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
VDR-201ENST00000229022 NAP1L2Q9ULW6 460 aaPredicted RBP16.39■□□□□ 0.22
VDR-201ENST00000229022 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
VDR-201ENST00000229022 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
VDR-201ENST00000229022 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
VDR-201ENST00000229022 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
VDR-201ENST00000229022 MSNP26038 577 aaKnown RBP16.38■□□□□ 0.21
VDR-201ENST00000229022 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
VDR-201ENST00000229022 IGF1RP08069 1367 aa16.37■□□□□ 0.21
VDR-201ENST00000229022 PTPRGP23470 1445 aa16.37■□□□□ 0.21
VDR-201ENST00000229022 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
VDR-201ENST00000229022 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
VDR-201ENST00000229022 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
VDR-201ENST00000229022 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
VDR-201ENST00000229022 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
VDR-201ENST00000229022 PANK3Q9H999 370 aa16.35■□□□□ 0.21
VDR-201ENST00000229022 USP47Q96K76 1375 aa16.35■□□□□ 0.21
VDR-201ENST00000229022 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
VDR-201ENST00000229022 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
VDR-201ENST00000229022 APBB1O00213 710 aa16.33■□□□□ 0.2
VDR-201ENST00000229022 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
VDR-201ENST00000229022 E9PSI1 815 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms