RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.66
SCNN1A-201ENST00000228916 POLR1AO95602 1720 aaPredicted RBP19.13■□□□□ 0.65
SCNN1A-201ENST00000228916 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
SCNN1A-201ENST00000228916 SPATA31E1Q6ZUB1 1445 aa19.1■□□□□ 0.65
SCNN1A-201ENST00000228916 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
SCNN1A-201ENST00000228916 FOXD1Q16676 465 aa19.09■□□□□ 0.65
SCNN1A-201ENST00000228916 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
SCNN1A-201ENST00000228916 DEKP35659 375 aaKnown RBP19.09■□□□□ 0.65
SCNN1A-201ENST00000228916 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
SCNN1A-201ENST00000228916 RPRD2Q5VT52 1461 aaKnown RBP19.08■□□□□ 0.65
SCNN1A-201ENST00000228916 TEX14Q8IWB6 1497 aa19.08■□□□□ 0.64
SCNN1A-201ENST00000228916 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
SCNN1A-201ENST00000228916 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
SCNN1A-201ENST00000228916 MIA2Q96PC5 1412 aa19.07■□□□□ 0.64
SCNN1A-201ENST00000228916 KIF7Q2M1P5 1343 aa19.06■□□□□ 0.64
SCNN1A-201ENST00000228916 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
SCNN1A-201ENST00000228916 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
SCNN1A-201ENST00000228916 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
SCNN1A-201ENST00000228916 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
SCNN1A-201ENST00000228916 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
SCNN1A-201ENST00000228916 IQGAP2Q13576 1575 aa19.04■□□□□ 0.64
SCNN1A-201ENST00000228916 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
SCNN1A-201ENST00000228916 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
SCNN1A-201ENST00000228916 WDR62O43379 1518 aa19.02■□□□□ 0.63
SCNN1A-201ENST00000228916 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
SCNN1A-201ENST00000228916 ROCK1Q13464 1354 aa19■□□□□ 0.63
SCNN1A-201ENST00000228916 NUDCQ9Y266 331 aa18.99■□□□□ 0.63
SCNN1A-201ENST00000228916 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
SCNN1A-201ENST00000228916 DAPK1P53355 1430 aa18.97■□□□□ 0.63
SCNN1A-201ENST00000228916 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
SCNN1A-201ENST00000228916 ZNF644Q9H582 1327 aaPredicted RBP18.94■□□□□ 0.62
SCNN1A-201ENST00000228916 ABCC5O15440 1437 aa18.94■□□□□ 0.62
SCNN1A-201ENST00000228916 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-201ENST00000228916 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
SCNN1A-201ENST00000228916 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
SCNN1A-201ENST00000228916 NBR1Q14596 966 aa18.92■□□□□ 0.62
SCNN1A-201ENST00000228916 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
SCNN1A-201ENST00000228916 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
SCNN1A-201ENST00000228916 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.62
SCNN1A-201ENST00000228916 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.62
SCNN1A-201ENST00000228916 ARID4BQ4LE39 1312 aaPredicted RBP18.87■□□□□ 0.61
SCNN1A-201ENST00000228916 NUP153P49790 1475 aaKnown RBP18.86■□□□□ 0.61
SCNN1A-201ENST00000228916 PZPP20742 1482 aa18.85■□□□□ 0.61
SCNN1A-201ENST00000228916 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
SCNN1A-201ENST00000228916 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
SCNN1A-201ENST00000228916 USP47Q96K76 1375 aa18.85■□□□□ 0.61
SCNN1A-201ENST00000228916 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
SCNN1A-201ENST00000228916 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-201ENST00000228916 KDM5CP41229 1560 aa18.83■□□□□ 0.6
SCNN1A-201ENST00000228916 KIF14Q15058 1648 aa18.83■□□□□ 0.6
SCNN1A-201ENST00000228916 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
SCNN1A-201ENST00000228916 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
SCNN1A-201ENST00000228916 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
SCNN1A-201ENST00000228916 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
SCNN1A-201ENST00000228916 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
SCNN1A-201ENST00000228916 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
SCNN1A-201ENST00000228916 KIAA1107Q9UPP5 1409 aa18.78■□□□□ 0.6
SCNN1A-201ENST00000228916 CAMSAP2Q08AD1 1489 aa18.77■□□□□ 0.6
SCNN1A-201ENST00000228916 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
SCNN1A-201ENST00000228916 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
SCNN1A-201ENST00000228916 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
SCNN1A-201ENST00000228916 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
SCNN1A-201ENST00000228916 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
SCNN1A-201ENST00000228916 ADGBQ8N7X0 1667 aa18.74■□□□□ 0.59
SCNN1A-201ENST00000228916 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
SCNN1A-201ENST00000228916 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
SCNN1A-201ENST00000228916 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-201ENST00000228916 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
SCNN1A-201ENST00000228916 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
SCNN1A-201ENST00000228916 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
SCNN1A-201ENST00000228916 RRP1P56182 461 aaKnown RBP18.73■□□□□ 0.59
SCNN1A-201ENST00000228916 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
SCNN1A-201ENST00000228916 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
SCNN1A-201ENST00000228916 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
SCNN1A-201ENST00000228916 GPATCH8Q9UKJ3 1502 aaKnown RBP18.72■□□□□ 0.59
SCNN1A-201ENST00000228916 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
SCNN1A-201ENST00000228916 CROCC2H7BZ55 1655 aa18.71■□□□□ 0.58
SCNN1A-201ENST00000228916 ITSN2Q9NZM3 1697 aa18.71■□□□□ 0.58
SCNN1A-201ENST00000228916 PKD2Q13563 968 aa18.7■□□□□ 0.58
SCNN1A-201ENST00000228916 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
SCNN1A-201ENST00000228916 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
SCNN1A-201ENST00000228916 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SCNN1A-201ENST00000228916 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
SCNN1A-201ENST00000228916 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
SCNN1A-201ENST00000228916 PLB1Q6P1J6 1458 aa18.68■□□□□ 0.58
SCNN1A-201ENST00000228916 EXOC6Q8TAG9 804 aa18.68■□□□□ 0.58
SCNN1A-201ENST00000228916 E9PCH4 1651 aa18.67■□□□□ 0.58
SCNN1A-201ENST00000228916 RALBP1Q15311 655 aa18.67■□□□□ 0.58
SCNN1A-201ENST00000228916 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
SCNN1A-201ENST00000228916 MS4A1P11836 297 aa18.66■□□□□ 0.58
SCNN1A-201ENST00000228916 PDE4AP27815 886 aa18.66■□□□□ 0.58
SCNN1A-201ENST00000228916 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
SCNN1A-201ENST00000228916 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
SCNN1A-201ENST00000228916 ADCY10Q96PN6 1610 aa18.65■□□□□ 0.58
SCNN1A-201ENST00000228916 BACH2Q9BYV9 841 aa18.65■□□□□ 0.58
SCNN1A-201ENST00000228916 ANKRD50Q9ULJ7 1429 aa18.64■□□□□ 0.57
SCNN1A-201ENST00000228916 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
SCNN1A-201ENST00000228916 ANKRD30AQ9BXX3 1397 aa18.63■□□□□ 0.57
SCNN1A-201ENST00000228916 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
SCNN1A-201ENST00000228916 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms