RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
PF4V1-201ENST00000226524 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
PF4V1-201ENST00000226524 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
PF4V1-201ENST00000226524 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
PF4V1-201ENST00000226524 ADAMTSL3P82987 1691 aa17.27■□□□□ 0.36
PF4V1-201ENST00000226524 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.35
PF4V1-201ENST00000226524 PTPRMP28827 1452 aa17.25■□□□□ 0.35
PF4V1-201ENST00000226524 LRRIQ1Q96JM4 1722 aa17.25■□□□□ 0.35
PF4V1-201ENST00000226524 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
PF4V1-201ENST00000226524 ATP10AO60312 1499 aa17.23■□□□□ 0.35
PF4V1-201ENST00000226524 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
PF4V1-201ENST00000226524 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
PF4V1-201ENST00000226524 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
PF4V1-201ENST00000226524 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
PF4V1-201ENST00000226524 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
PF4V1-201ENST00000226524 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
PF4V1-201ENST00000226524 KDM5CP41229 1560 aa17.19■□□□□ 0.34
PF4V1-201ENST00000226524 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
PF4V1-201ENST00000226524 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
PF4V1-201ENST00000226524 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
PF4V1-201ENST00000226524 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
PF4V1-201ENST00000226524 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
PF4V1-201ENST00000226524 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
PF4V1-201ENST00000226524 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
PF4V1-201ENST00000226524 ABCC1P33527 1531 aa17.15■□□□□ 0.34
PF4V1-201ENST00000226524 MLECQ14165 292 aa17.14■□□□□ 0.33
PF4V1-201ENST00000226524 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
PF4V1-201ENST00000226524 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
PF4V1-201ENST00000226524 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
PF4V1-201ENST00000226524 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
PF4V1-201ENST00000226524 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
PF4V1-201ENST00000226524 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
PF4V1-201ENST00000226524 KIAA1107Q9UPP5 1409 aa17.12■□□□□ 0.33
PF4V1-201ENST00000226524 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
PF4V1-201ENST00000226524 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
PF4V1-201ENST00000226524 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
PF4V1-201ENST00000226524 TRAPPC8Q9Y2L5 1435 aa17.09■□□□□ 0.33
PF4V1-201ENST00000226524 ARHGEF12Q9NZN5 1544 aa17.09■□□□□ 0.33
PF4V1-201ENST00000226524 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
PF4V1-201ENST00000226524 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
PF4V1-201ENST00000226524 AGLP35573 1532 aa17.07■□□□□ 0.32
PF4V1-201ENST00000226524 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
PF4V1-201ENST00000226524 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
PF4V1-201ENST00000226524 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.32
PF4V1-201ENST00000226524 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
PF4V1-201ENST00000226524 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
PF4V1-201ENST00000226524 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
PF4V1-201ENST00000226524 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
PF4V1-201ENST00000226524 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
PF4V1-201ENST00000226524 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
PF4V1-201ENST00000226524 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
PF4V1-201ENST00000226524 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.31
PF4V1-201ENST00000226524 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
PF4V1-201ENST00000226524 ATP7AQ04656 1500 aa17■□□□□ 0.31
PF4V1-201ENST00000226524 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
PF4V1-201ENST00000226524 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
PF4V1-201ENST00000226524 APLP2Q06481 763 aa16.98■□□□□ 0.31
PF4V1-201ENST00000226524 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
PF4V1-201ENST00000226524 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
PF4V1-201ENST00000226524 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
PF4V1-201ENST00000226524 PREX1Q8TCU6 1659 aa16.97■□□□□ 0.31
PF4V1-201ENST00000226524 SETD1BQ9UPS6 1966 aaKnown RBP16.97■□□□□ 0.31
PF4V1-201ENST00000226524 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
PF4V1-201ENST00000226524 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
PF4V1-201ENST00000226524 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
PF4V1-201ENST00000226524 A2MP01023 1474 aa16.95■□□□□ 0.3
PF4V1-201ENST00000226524 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
PF4V1-201ENST00000226524 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
PF4V1-201ENST00000226524 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
PF4V1-201ENST00000226524 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
PF4V1-201ENST00000226524 HSPA2P54652 639 aa16.93■□□□□ 0.3
PF4V1-201ENST00000226524 ILDR1Q86SU0 546 aaPredicted RBP16.93■□□□□ 0.3
PF4V1-201ENST00000226524 ADGBQ8N7X0 1667 aa16.93■□□□□ 0.3
PF4V1-201ENST00000226524 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
PF4V1-201ENST00000226524 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
PF4V1-201ENST00000226524 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
PF4V1-201ENST00000226524 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
PF4V1-201ENST00000226524 CAMSAP2Q08AD1 1489 aa16.9■□□□□ 0.3
PF4V1-201ENST00000226524 MROH2AA6NES4 1674 aa16.9■□□□□ 0.3
PF4V1-201ENST00000226524 PLXNC1O60486 1568 aa16.89■□□□□ 0.3
PF4V1-201ENST00000226524 NPATQ14207 1427 aa16.89■□□□□ 0.29
PF4V1-201ENST00000226524 C3P01024 1663 aa16.89■□□□□ 0.29
PF4V1-201ENST00000226524 GGT6Q6P531 493 aa16.88■□□□□ 0.29
PF4V1-201ENST00000226524 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
PF4V1-201ENST00000226524 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
PF4V1-201ENST00000226524 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
PF4V1-201ENST00000226524 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
PF4V1-201ENST00000226524 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
PF4V1-201ENST00000226524 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
PF4V1-201ENST00000226524 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
PF4V1-201ENST00000226524 KIF3BO15066 747 aa16.82■□□□□ 0.28
PF4V1-201ENST00000226524 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
PF4V1-201ENST00000226524 CLTCQ00610 1675 aaKnown RBP16.8■□□□□ 0.28
PF4V1-201ENST00000226524 PTPRTO14522 1441 aa16.78■□□□□ 0.28
PF4V1-201ENST00000226524 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
PF4V1-201ENST00000226524 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.28
PF4V1-201ENST00000226524 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
PF4V1-201ENST00000226524 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
PF4V1-201ENST00000226524 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
PF4V1-201ENST00000226524 PKD2Q13563 968 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms