RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 EFCAB2Q5VUJ9 269 aa23.26■■□□□ 1.31
RPA3-201ENST00000223129 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
RPA3-201ENST00000223129 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
RPA3-201ENST00000223129 PHLDB1Q86UU1 1377 aa23.25■■□□□ 1.31
RPA3-201ENST00000223129 ARAP3Q8WWN8 1544 aa23.24■■□□□ 1.31
RPA3-201ENST00000223129 NEO1Q92859 1461 aa23.22■■□□□ 1.31
RPA3-201ENST00000223129 AKNAQ7Z591 1439 aa23.22■■□□□ 1.31
RPA3-201ENST00000223129 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
RPA3-201ENST00000223129 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
RPA3-201ENST00000223129 ZNF644Q9H582 1327 aaPredicted RBP23.19■■□□□ 1.3
RPA3-201ENST00000223129 CFAP74Q9C0B2 1584 aa23.19■■□□□ 1.3
RPA3-201ENST00000223129 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
RPA3-201ENST00000223129 ADGRL1O94910 1474 aa23.16■■□□□ 1.3
RPA3-201ENST00000223129 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
RPA3-201ENST00000223129 KDM6BO15054 1643 aa23.15■■□□□ 1.3
RPA3-201ENST00000223129 SCAPERQ9BY12 1400 aa23.15■■□□□ 1.3
RPA3-201ENST00000223129 RAPGEF3O95398 923 aa23.14■■□□□ 1.29
RPA3-201ENST00000223129 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
RPA3-201ENST00000223129 MIA2Q96PC5 1412 aa23.12■■□□□ 1.29
RPA3-201ENST00000223129 ARHGEF12Q9NZN5 1544 aa23.11■■□□□ 1.29
RPA3-201ENST00000223129 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
RPA3-201ENST00000223129 ABCC1P33527 1531 aa23.1■■□□□ 1.29
RPA3-201ENST00000223129 CAMSAP2Q08AD1 1489 aa23.1■■□□□ 1.29
RPA3-201ENST00000223129 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
RPA3-201ENST00000223129 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
RPA3-201ENST00000223129 AFAP1Q8N556 730 aa23.08■■□□□ 1.28
RPA3-201ENST00000223129 PTPN23Q9H3S7 1636 aa23.07■■□□□ 1.28
RPA3-201ENST00000223129 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
RPA3-201ENST00000223129 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
RPA3-201ENST00000223129 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
RPA3-201ENST00000223129 POGZQ7Z3K3 1410 aa23.04■■□□□ 1.28
RPA3-201ENST00000223129 RICTORQ6R327 1708 aa23.04■■□□□ 1.28
RPA3-201ENST00000223129 FRMPD1Q5SYB0 1578 aa23.04■■□□□ 1.28
RPA3-201ENST00000223129 FAM50AQ14320 339 aaKnown RBP23.04■■□□□ 1.28
RPA3-201ENST00000223129 MBD5Q9P267 1494 aa23.03■■□□□ 1.28
RPA3-201ENST00000223129 TCOF1Q13428 1488 aaKnown RBP23.01■■□□□ 1.27
RPA3-201ENST00000223129 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
RPA3-201ENST00000223129 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
RPA3-201ENST00000223129 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
RPA3-201ENST00000223129 KDM5CP41229 1560 aa22.95■■□□□ 1.26
RPA3-201ENST00000223129 RSPH4AQ5TD94 716 aa22.95■■□□□ 1.26
RPA3-201ENST00000223129 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
RPA3-201ENST00000223129 ARHGEF5Q12774 1597 aa22.94■■□□□ 1.26
RPA3-201ENST00000223129 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
RPA3-201ENST00000223129 ZMYM4Q5VZL5 1548 aa22.93■■□□□ 1.26
RPA3-201ENST00000223129 ABCC5O15440 1437 aa22.92■■□□□ 1.26
RPA3-201ENST00000223129 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
RPA3-201ENST00000223129 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
RPA3-201ENST00000223129 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
RPA3-201ENST00000223129 DAPK1P53355 1430 aa22.9■■□□□ 1.26
RPA3-201ENST00000223129 ITGAEP38570 1179 aa22.9■■□□□ 1.26
RPA3-201ENST00000223129 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.26
RPA3-201ENST00000223129 MLH3Q9UHC1 1453 aa22.89■■□□□ 1.26
RPA3-201ENST00000223129 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.25
RPA3-201ENST00000223129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
RPA3-201ENST00000223129 KIDINS220Q9ULH0 1771 aa22.88■■□□□ 1.25
RPA3-201ENST00000223129 MAGI2Q86UL8 1455 aa22.88■■□□□ 1.25
RPA3-201ENST00000223129 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
RPA3-201ENST00000223129 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
RPA3-201ENST00000223129 ATP7AQ04656 1500 aa22.86■■□□□ 1.25
RPA3-201ENST00000223129 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
RPA3-201ENST00000223129 C9orf84Q5VXU9 1444 aa22.84■■□□□ 1.25
RPA3-201ENST00000223129 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
RPA3-201ENST00000223129 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
RPA3-201ENST00000223129 RTEL1-TNFRSF6BF6WH68 1400 aa22.83■■□□□ 1.25
RPA3-201ENST00000223129 ARHGEF40Q8TER5 1519 aa22.82■■□□□ 1.24
RPA3-201ENST00000223129 ABCA6Q8N139 1617 aa22.82■■□□□ 1.24
RPA3-201ENST00000223129 DIP2CQ9Y2E4 1556 aa22.81■■□□□ 1.24
RPA3-201ENST00000223129 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
RPA3-201ENST00000223129 SHANK2Q9UPX8 1470 aa22.8■■□□□ 1.24
RPA3-201ENST00000223129 ATP10AO60312 1499 aa22.79■■□□□ 1.24
RPA3-201ENST00000223129 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
RPA3-201ENST00000223129 SIGLEC1Q9BZZ2 1709 aa22.74■■□□□ 1.23
RPA3-201ENST00000223129 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
RPA3-201ENST00000223129 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
RPA3-201ENST00000223129 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
RPA3-201ENST00000223129 ARID4BQ4LE39 1312 aaPredicted RBP22.73■■□□□ 1.23
RPA3-201ENST00000223129 A2MP01023 1474 aa22.72■■□□□ 1.23
RPA3-201ENST00000223129 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
RPA3-201ENST00000223129 ADGRL2O95490 1459 aa22.71■■□□□ 1.23
RPA3-201ENST00000223129 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
RPA3-201ENST00000223129 DHX29Q7Z478 1369 aaKnown RBP22.7■■□□□ 1.22
RPA3-201ENST00000223129 REREQ9P2R6 1566 aa22.68■■□□□ 1.22
RPA3-201ENST00000223129 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
RPA3-201ENST00000223129 MLECQ14165 292 aa22.66■■□□□ 1.22
RPA3-201ENST00000223129 DUOX2Q9NRD8 1548 aa22.65■■□□□ 1.22
RPA3-201ENST00000223129 KIF3BO15066 747 aa22.63■■□□□ 1.21
RPA3-201ENST00000223129 AGLP35573 1532 aa22.62■■□□□ 1.21
RPA3-201ENST00000223129 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
RPA3-201ENST00000223129 GGT6Q6P531 493 aa22.6■■□□□ 1.21
RPA3-201ENST00000223129 ANKRD50Q9ULJ7 1429 aa22.59■■□□□ 1.21
RPA3-201ENST00000223129 ERBINQ96RT1 1412 aa22.58■■□□□ 1.21
RPA3-201ENST00000223129 NAIPQ13075 1403 aa22.58■■□□□ 1.21
RPA3-201ENST00000223129 BCORL1Q5H9F3 1711 aa22.57■■□□□ 1.2
RPA3-201ENST00000223129 HFM1A2PYH4 1435 aa22.55■■□□□ 1.2
RPA3-201ENST00000223129 EIF2AK4Q9P2K8 1649 aaKnown RBP22.54■■□□□ 1.2
RPA3-201ENST00000223129 KDM4FA0A1W2PPD8 638 aa22.53■■□□□ 1.2
RPA3-201ENST00000223129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.22e-6■■■■□ 26.7
RPA3-201ENST00000223129 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
RPA3-201ENST00000223129 ADAMTSL3P82987 1691 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms