RNA–Protein interactions for RNA: ENST00000221448.9

SNRNP70-201, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2 BASIC

Gene SNRNP70, Length 1,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-201ENST00000221448 EFCAB2Q5VUJ9 269 aa34.93■■■■□ 3.18
SNRNP70-201ENST00000221448 CFDP1Q9UEE9 299 aaPredicted RBP34.93■■■■□ 3.18
SNRNP70-201ENST00000221448 ZNF777Q9ULD5 760 aaPredicted RBP34.92■■■■□ 3.18
SNRNP70-201ENST00000221448 PHLDB1Q86UU1 1377 aa34.92■■■■□ 3.18
SNRNP70-201ENST00000221448 ARAP3Q8WWN8 1544 aa34.91■■■■□ 3.18
SNRNP70-201ENST00000221448 ITSN2Q9NZM3 1697 aa34.9■■■■□ 3.18
SNRNP70-201ENST00000221448 NEO1Q92859 1461 aa34.88■■■■□ 3.17
SNRNP70-201ENST00000221448 AKNAQ7Z591 1439 aa34.88■■■■□ 3.17
SNRNP70-201ENST00000221448 CFAP74Q9C0B2 1584 aa34.86■■■■□ 3.17
SNRNP70-201ENST00000221448 MYOM3Q5VTT5 1437 aa34.85■■■■□ 3.17
SNRNP70-201ENST00000221448 ZNF644Q9H582 1327 aaPredicted RBP34.82■■■■□ 3.16
SNRNP70-201ENST00000221448 COL17A1Q9UMD9 1497 aaPredicted RBP34.81■■■■□ 3.16
SNRNP70-201ENST00000221448 SAMD9LQ8IVG5 1584 aa34.79■■■■□ 3.16
SNRNP70-201ENST00000221448 ADGRL1O94910 1474 aa34.79■■■■□ 3.16
SNRNP70-201ENST00000221448 KDM6BO15054 1643 aa34.78■■■■□ 3.16
SNRNP70-201ENST00000221448 SCAPERQ9BY12 1400 aa34.76■■■■□ 3.15
SNRNP70-201ENST00000221448 RAPGEF3O95398 923 aa34.74■■■■□ 3.15
SNRNP70-201ENST00000221448 HNRNPMP52272 730 aaKnown RBP eCLIP34.72■■■■□ 3.153e-8■■□□□ 13.9
SNRNP70-201ENST00000221448 FGD6Q6ZV73 1430 aa34.72■■■■□ 3.15
SNRNP70-201ENST00000221448 MIA2Q96PC5 1412 aa34.72■■■■□ 3.15
SNRNP70-201ENST00000221448 ABCC1P33527 1531 aa34.72■■■■□ 3.15
SNRNP70-201ENST00000221448 CAMSAP2Q08AD1 1489 aa34.7■■■■□ 3.15
SNRNP70-201ENST00000221448 ARHGEF12Q9NZN5 1544 aa34.7■■■■□ 3.15
SNRNP70-201ENST00000221448 SYCP2Q9BX26 1530 aa34.69■■■■□ 3.14
SNRNP70-201ENST00000221448 DENND4BO75064 1496 aaPredicted RBP34.68■■■■□ 3.14
SNRNP70-201ENST00000221448 PTPN23Q9H3S7 1636 aa34.67■■■■□ 3.14
SNRNP70-201ENST00000221448 AFAP1Q8N556 730 aa34.64■■■■□ 3.14
SNRNP70-201ENST00000221448 PLEKHH2Q8IVE3 1493 aa34.64■■■■□ 3.14
SNRNP70-201ENST00000221448 TRAPPC8Q9Y2L5 1435 aa34.63■■■■□ 3.13
SNRNP70-201ENST00000221448 POGZQ7Z3K3 1410 aa34.62■■■■□ 3.13
SNRNP70-201ENST00000221448 KIAA1107Q9UPP5 1409 aa34.62■■■■□ 3.13
SNRNP70-201ENST00000221448 FRMPD1Q5SYB0 1578 aa34.62■■■■□ 3.13
SNRNP70-201ENST00000221448 RICTORQ6R327 1708 aa34.62■■■■□ 3.13
SNRNP70-201ENST00000221448 FAM50AQ14320 339 aaKnown RBP34.61■■■■□ 3.13
SNRNP70-201ENST00000221448 MBD5Q9P267 1494 aa34.58■■■■□ 3.13
SNRNP70-201ENST00000221448 ZNF518AQ6AHZ1 1483 aa34.56■■■■□ 3.12
SNRNP70-201ENST00000221448 TCOF1Q13428 1488 aaKnown RBP34.56■■■■□ 3.12
SNRNP70-201ENST00000221448 MYT1LQ9UL68 1186 aa34.51■■■■□ 3.11
SNRNP70-201ENST00000221448 KDM5CP41229 1560 aa34.48■■■■□ 3.11
SNRNP70-201ENST00000221448 CCDC141Q6ZP82 1450 aa34.47■■■■□ 3.11
SNRNP70-201ENST00000221448 ARHGEF5Q12774 1597 aa34.47■■■■□ 3.11
SNRNP70-201ENST00000221448 RRBP1Q9P2E9 1410 aaKnown RBP34.47■■■■□ 3.11
SNRNP70-201ENST00000221448 RSPH4AQ5TD94 716 aa34.44■■■■□ 3.1
SNRNP70-201ENST00000221448 SPAG9O60271 1321 aaKnown RBP34.44■■■■□ 3.1
SNRNP70-201ENST00000221448 ZMYM4Q5VZL5 1548 aa34.44■■■■□ 3.1
SNRNP70-201ENST00000221448 HECW2Q9P2P5 1572 aa34.41■■■■□ 3.1
SNRNP70-201ENST00000221448 ABCC5O15440 1437 aa34.41■■■■□ 3.1
SNRNP70-201ENST00000221448 TSPY4P0CV99 314 aa34.41■■■■□ 3.1
SNRNP70-201ENST00000221448 TSPY10P0CW01 314 aa34.41■■■■□ 3.1
SNRNP70-201ENST00000221448 ITGAEP38570 1179 aa34.41■■■■□ 3.1
SNRNP70-201ENST00000221448 DNMT1P26358 1616 aaKnown RBP34.4■■■■□ 3.1
SNRNP70-201ENST00000221448 DAPK1P53355 1430 aa34.4■■■■□ 3.1
SNRNP70-201ENST00000221448 YEATS2Q9ULM3 1422 aa34.4■■■■□ 3.1
SNRNP70-201ENST00000221448 MLH3Q9UHC1 1453 aa34.37■■■■□ 3.09
SNRNP70-201ENST00000221448 ZFYVE16Q7Z3T8 1539 aa34.36■■■■□ 3.09
SNRNP70-201ENST00000221448 KIDINS220Q9ULH0 1771 aa34.36■■■■□ 3.09
SNRNP70-201ENST00000221448 MAGI2Q86UL8 1455 aa34.35■■■■□ 3.09
SNRNP70-201ENST00000221448 CHIC2Q9UKJ5 165 aa34.35■■■■□ 3.09
SNRNP70-201ENST00000221448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.35■■■■□ 3.096e-8■□□□□ 11.1
SNRNP70-201ENST00000221448 ATP7AQ04656 1500 aa34.34■■■■□ 3.09
SNRNP70-201ENST00000221448 CROCC2H7BZ55 1655 aa34.34■■■■□ 3.09
SNRNP70-201ENST00000221448 INO80Q9ULG1 1556 aaPredicted RBP34.33■■■■□ 3.09
SNRNP70-201ENST00000221448 C9orf84Q5VXU9 1444 aa34.32■■■■□ 3.08
SNRNP70-201ENST00000221448 ARHGEF40Q8TER5 1519 aa34.3■■■■□ 3.08
SNRNP70-201ENST00000221448 ABCA6Q8N139 1617 aa34.3■■■■□ 3.08
SNRNP70-201ENST00000221448 PTPRKQ15262 1439 aa34.29■■■■□ 3.08
SNRNP70-201ENST00000221448 RTEL1-TNFRSF6BF6WH68 1400 aa34.28■■■■□ 3.08
SNRNP70-201ENST00000221448 DIP2CQ9Y2E4 1556 aa34.27■■■■□ 3.08
SNRNP70-201ENST00000221448 MAST1Q9Y2H9 1570 aa34.26■■■■□ 3.08
SNRNP70-201ENST00000221448 SHANK2Q9UPX8 1470 aa34.26■■■■□ 3.07
SNRNP70-201ENST00000221448 ATP10AO60312 1499 aa34.23■■■■□ 3.07
SNRNP70-201ENST00000221448 RRP7BPQ9NSQ0 103 aa34.2■■■■□ 3.07
SNRNP70-201ENST00000221448 ADGBQ8N7X0 1667 aa34.17■■■■□ 3.06
SNRNP70-201ENST00000221448 SIGLEC1Q9BZZ2 1709 aa34.15■■■■□ 3.06
SNRNP70-201ENST00000221448 ANKRD30AQ9BXX3 1397 aa34.14■■■■□ 3.06
SNRNP70-201ENST00000221448 ARID4BQ4LE39 1312 aaPredicted RBP34.14■■■■□ 3.06
SNRNP70-201ENST00000221448 PLXNC1O60486 1568 aa34.14■■■■□ 3.06
SNRNP70-201ENST00000221448 NCOA1Q15788 1441 aa34.13■■■■□ 3.05
SNRNP70-201ENST00000221448 A2MP01023 1474 aa34.13■■■■□ 3.05
SNRNP70-201ENST00000221448 KIF15Q9NS87 1388 aa34.12■■■■□ 3.05
SNRNP70-201ENST00000221448 ADGRL2O95490 1459 aa34.11■■■■□ 3.05
SNRNP70-201ENST00000221448 DHX29Q7Z478 1369 aaKnown RBP34.08■■■■□ 3.05
SNRNP70-201ENST00000221448 REREQ9P2R6 1566 aa34.06■■■■□ 3.04
SNRNP70-201ENST00000221448 ROCK1Q13464 1354 aa34.05■■■■□ 3.04
SNRNP70-201ENST00000221448 MLECQ14165 292 aa34.04■■■■□ 3.04
SNRNP70-201ENST00000221448 DUOX2Q9NRD8 1548 aa34.03■■■■□ 3.04
SNRNP70-201ENST00000221448 KIF3BO15066 747 aa33.99■■■■□ 3.03
SNRNP70-201ENST00000221448 AGLP35573 1532 aa33.97■■■■□ 3.03
SNRNP70-201ENST00000221448 TRIM26Q12899 539 aaPredicted RBP33.95■■■■□ 3.03
SNRNP70-201ENST00000221448 ANKRD50Q9ULJ7 1429 aa33.94■■■■□ 3.02
SNRNP70-201ENST00000221448 GGT6Q6P531 493 aa33.93■■■■□ 3.02
SNRNP70-201ENST00000221448 ERBINQ96RT1 1412 aa33.93■■■■□ 3.02
SNRNP70-201ENST00000221448 BCORL1Q5H9F3 1711 aa33.91■■■■□ 3.02
SNRNP70-201ENST00000221448 NAIPQ13075 1403 aa33.9■■■■□ 3.02
SNRNP70-201ENST00000221448 EIF2AK4Q9P2K8 1649 aaKnown RBP33.88■■■■□ 3.01
SNRNP70-201ENST00000221448 HFM1A2PYH4 1435 aa33.87■■■■□ 3.01
SNRNP70-201ENST00000221448 GCC2Q8IWJ2 1684 aa33.85■■■■□ 3.01
SNRNP70-201ENST00000221448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.82■■■■□ 3.011e-10■■□□□ 11.8
SNRNP70-201ENST00000221448 KDM4FA0A1W2PPD8 638 aa33.81■■■■□ 3
SNRNP70-201ENST00000221448 ADAMTSL3P82987 1691 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms