RNA–Protein interactions for RNA: ENST00000220676.1

RP1-201, Transcript of RP1, axonemal microtubule associated, humanhuman

TSL 1 (best) BASIC

Gene RP1, Length 7,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP1-201ENST00000220676 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
RP1-201ENST00000220676 MSH5O43196 834 aa13.88□□□□□ -0.19
RP1-201ENST00000220676 GORABQ5T7V8 394 aa13.87□□□□□ -0.19
RP1-201ENST00000220676 CLIP1P30622 1438 aa13.87□□□□□ -0.19
RP1-201ENST00000220676 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
RP1-201ENST00000220676 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
RP1-201ENST00000220676 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
RP1-201ENST00000220676 NUTM2FA1L443 756 aa13.86□□□□□ -0.19
RP1-201ENST00000220676 MCCP23508 829 aa13.86□□□□□ -0.19
RP1-201ENST00000220676 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
RP1-201ENST00000220676 LTV1Q96GA3 475 aaPredicted RBP13.84□□□□□ -0.19
RP1-201ENST00000220676 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
RP1-201ENST00000220676 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
RP1-201ENST00000220676 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.2
RP1-201ENST00000220676 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
RP1-201ENST00000220676 NOL8Q76FK4 1167 aaKnown RBP13.83□□□□□ -0.2
RP1-201ENST00000220676 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
RP1-201ENST00000220676 KRI1Q8N9T8 703 aaKnown RBP13.82□□□□□ -0.2
RP1-201ENST00000220676 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
RP1-201ENST00000220676 TMF1P82094 1093 aa13.81□□□□□ -0.2
RP1-201ENST00000220676 RASSF8Q8NHQ8 419 aa13.81□□□□□ -0.2
RP1-201ENST00000220676 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
RP1-201ENST00000220676 CHMP4BQ9H444 224 aaKnown RBP13.81□□□□□ -0.2
RP1-201ENST00000220676 KANK1Q14678 1352 aa13.8□□□□□ -0.2
RP1-201ENST00000220676 RAD21O60216 631 aa13.8□□□□□ -0.2
RP1-201ENST00000220676 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
RP1-201ENST00000220676 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
RP1-201ENST00000220676 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
RP1-201ENST00000220676 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
RP1-201ENST00000220676 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
RP1-201ENST00000220676 FOXD1Q16676 465 aa13.78□□□□□ -0.2
RP1-201ENST00000220676 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
RP1-201ENST00000220676 MS4A1P11836 297 aa13.78□□□□□ -0.2
RP1-201ENST00000220676 SLC4A10Q6U841 1118 aa13.78□□□□□ -0.2
RP1-201ENST00000220676 TRIM6-TRIM34B2RNG4 842 aa13.77□□□□□ -0.21
RP1-201ENST00000220676 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
RP1-201ENST00000220676 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
RP1-201ENST00000220676 MARCH6O60337 910 aa13.75□□□□□ -0.21
RP1-201ENST00000220676 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
RP1-201ENST00000220676 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
RP1-201ENST00000220676 NOP58Q9Y2X3 529 aaKnown RBP13.75□□□□□ -0.21
RP1-201ENST00000220676 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
RP1-201ENST00000220676 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
RP1-201ENST00000220676 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
RP1-201ENST00000220676 FBXW7Q969H0 707 aa13.73□□□□□ -0.21
RP1-201ENST00000220676 CCNB3Q8WWL7 1395 aa13.72□□□□□ -0.21
RP1-201ENST00000220676 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
RP1-201ENST00000220676 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
RP1-201ENST00000220676 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
RP1-201ENST00000220676 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
RP1-201ENST00000220676 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
RP1-201ENST00000220676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
RP1-201ENST00000220676 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.22
RP1-201ENST00000220676 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.22
RP1-201ENST00000220676 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
RP1-201ENST00000220676 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
RP1-201ENST00000220676 EVA1CP58658 441 aa13.68□□□□□ -0.22
RP1-201ENST00000220676 CCDC146Q8IYE0 955 aa13.68□□□□□ -0.22
RP1-201ENST00000220676 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
RP1-201ENST00000220676 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
RP1-201ENST00000220676 AMPHP49418 695 aa13.67□□□□□ -0.22
RP1-201ENST00000220676 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
RP1-201ENST00000220676 SPAG9O60271 1321 aaKnown RBP13.66□□□□□ -0.22
RP1-201ENST00000220676 CEP89Q96ST8 783 aa13.66□□□□□ -0.22
RP1-201ENST00000220676 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
RP1-201ENST00000220676 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
RP1-201ENST00000220676 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
RP1-201ENST00000220676 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
RP1-201ENST00000220676 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
RP1-201ENST00000220676 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
RP1-201ENST00000220676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
RP1-201ENST00000220676 TCEAL9Q9UHQ7 104 aa13.63□□□□□ -0.23
RP1-201ENST00000220676 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
RP1-201ENST00000220676 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
RP1-201ENST00000220676 TPM4P67936 248 aa13.63□□□□□ -0.23
RP1-201ENST00000220676 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
RP1-201ENST00000220676 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
RP1-201ENST00000220676 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
RP1-201ENST00000220676 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
RP1-201ENST00000220676 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
RP1-201ENST00000220676 PKD2Q13563 968 aa13.61□□□□□ -0.23
RP1-201ENST00000220676 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
RP1-201ENST00000220676 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
RP1-201ENST00000220676 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
RP1-201ENST00000220676 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
RP1-201ENST00000220676 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.23
RP1-201ENST00000220676 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.23
RP1-201ENST00000220676 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.23
RP1-201ENST00000220676 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
RP1-201ENST00000220676 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
RP1-201ENST00000220676 KTN1Q86UP2 1357 aaKnown RBP13.57□□□□□ -0.24
RP1-201ENST00000220676 RILPL2Q969X0 211 aa13.57□□□□□ -0.24
RP1-201ENST00000220676 KIF3BO15066 747 aa13.57□□□□□ -0.24
RP1-201ENST00000220676 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
RP1-201ENST00000220676 GBP4Q96PP9 640 aa13.56□□□□□ -0.24
RP1-201ENST00000220676 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
RP1-201ENST00000220676 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
RP1-201ENST00000220676 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
RP1-201ENST00000220676 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
RP1-201ENST00000220676 GOLGA6L1Q8N7Z2 621 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms