RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 L3MBTL2Q969R5 705 aa30.7■■■□□ 2.5
HTATSF1-201ENST00000218364 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
HTATSF1-201ENST00000218364 ANKRD30BQ9BXX2 1392 aa30.65■■■□□ 2.5
HTATSF1-201ENST00000218364 CCDC7Q96M83 1385 aa30.65■■■□□ 2.5
HTATSF1-201ENST00000218364 ERICH6BQ5W0A0 696 aa30.64■■■□□ 2.5
HTATSF1-201ENST00000218364 DAPK1P53355 1430 aa30.63■■■□□ 2.49
HTATSF1-201ENST00000218364 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
HTATSF1-201ENST00000218364 TEX14Q8IWB6 1497 aa30.6■■■□□ 2.49
HTATSF1-201ENST00000218364 C11orf95C9JLR9 678 aaPredicted RBP30.59■■■□□ 2.49
HTATSF1-201ENST00000218364 PRKRIP1Q9H875 184 aaPredicted RBP30.58■■■□□ 2.49
HTATSF1-201ENST00000218364 ABCC5O15440 1437 aa30.58■■■□□ 2.49
HTATSF1-201ENST00000218364 FOXD1Q16676 465 aa30.55■■■□□ 2.48
HTATSF1-201ENST00000218364 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
HTATSF1-201ENST00000218364 SPATA31E1Q6ZUB1 1445 aa30.55■■■□□ 2.48
HTATSF1-201ENST00000218364 NBPF8Q3BBV2 869 aa30.54■■■□□ 2.48
HTATSF1-201ENST00000218364 POLR1AO95602 1720 aaPredicted RBP30.51■■■□□ 2.47
HTATSF1-201ENST00000218364 KIAA0556O60303 1618 aa30.49■■■□□ 2.47
HTATSF1-201ENST00000218364 CDK11AQ9UQ88 783 aaPredicted RBP30.48■■■□□ 2.47
HTATSF1-201ENST00000218364 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
HTATSF1-201ENST00000218364 DISP1Q96F81 1524 aa30.48■■■□□ 2.47
HTATSF1-201ENST00000218364 NUP153P49790 1475 aaKnown RBP30.47■■■□□ 2.47
HTATSF1-201ENST00000218364 IRX6P78412 446 aaPredicted RBP30.47■■■□□ 2.47
HTATSF1-201ENST00000218364 KIAA0586Q9BVV6 1533 aa30.47■■■□□ 2.47
HTATSF1-201ENST00000218364 FANCIQ9NVI1 1328 aa30.46■■■□□ 2.47
HTATSF1-201ENST00000218364 ZBED9Q6R2W3 1325 aa30.46■■■□□ 2.47
HTATSF1-201ENST00000218364 PPP4R2Q9NY27 417 aa30.45■■■□□ 2.46
HTATSF1-201ENST00000218364 ARID3CA6NKF2 412 aa30.44■■■□□ 2.46
HTATSF1-201ENST00000218364 KIF7Q2M1P5 1343 aa30.44■■■□□ 2.46
HTATSF1-201ENST00000218364 MRS2Q9HD23 443 aa30.43■■■□□ 2.46
HTATSF1-201ENST00000218364 SLC4A1APQ9BWU0 796 aaKnown RBP30.42■■■□□ 2.46
HTATSF1-201ENST00000218364 RAPGEF6Q8TEU7 1601 aa30.42■■■□□ 2.46
HTATSF1-201ENST00000218364 ZNF644Q9H582 1327 aaPredicted RBP30.41■■■□□ 2.46
HTATSF1-201ENST00000218364 FBLN2P98095 1184 aa30.41■■■□□ 2.46
HTATSF1-201ENST00000218364 CHMP7Q8WUX9 453 aaPredicted RBP30.41■■■□□ 2.46
HTATSF1-201ENST00000218364 PZPP20742 1482 aa30.39■■■□□ 2.46
HTATSF1-201ENST00000218364 MSH5O43196 834 aa30.39■■■□□ 2.46
HTATSF1-201ENST00000218364 FAM9BQ8IZU0 186 aa30.38■■■□□ 2.45
HTATSF1-201ENST00000218364 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
HTATSF1-201ENST00000218364 MBD5Q9P267 1494 aa30.36■■■□□ 2.45
HTATSF1-201ENST00000218364 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
HTATSF1-201ENST00000218364 TROQ12816 1431 aaPredicted RBP30.31■■■□□ 2.44
HTATSF1-201ENST00000218364 CAMSAP2Q08AD1 1489 aa30.31■■■□□ 2.44
HTATSF1-201ENST00000218364 ADGBQ8N7X0 1667 aa30.31■■■□□ 2.44
HTATSF1-201ENST00000218364 ADGRL2O95490 1459 aa30.3■■■□□ 2.44
HTATSF1-201ENST00000218364 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
HTATSF1-201ENST00000218364 KIAA1107Q9UPP5 1409 aa30.28■■■□□ 2.44
HTATSF1-201ENST00000218364 DHX29Q7Z478 1369 aaKnown RBP30.27■■■□□ 2.44
HTATSF1-201ENST00000218364 PRG4Q92954 1404 aaPredicted RBP30.25■■■□□ 2.43
HTATSF1-201ENST00000218364 GPATCH8Q9UKJ3 1502 aaKnown RBP30.24■■■□□ 2.43
HTATSF1-201ENST00000218364 ADCY10Q96PN6 1610 aa30.24■■■□□ 2.43
HTATSF1-201ENST00000218364 CROCC2H7BZ55 1655 aa30.23■■■□□ 2.43
HTATSF1-201ENST00000218364 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
HTATSF1-201ENST00000218364 CFDP1Q9UEE9 299 aaPredicted RBP30.22■■■□□ 2.43
HTATSF1-201ENST00000218364 KIF14Q15058 1648 aa30.22■■■□□ 2.43
HTATSF1-201ENST00000218364 SMG6Q86US8 1419 aaKnown RBP30.21■■■□□ 2.43
HTATSF1-201ENST00000218364 BCORL1Q5H9F3 1711 aa30.2■■■□□ 2.42
HTATSF1-201ENST00000218364 USP47Q96K76 1375 aa30.19■■■□□ 2.42
HTATSF1-201ENST00000218364 KDM5CP41229 1560 aa30.17■■■□□ 2.42
HTATSF1-201ENST00000218364 UHRF1BP1Q6BDS2 1440 aa30.15■■■□□ 2.42
HTATSF1-201ENST00000218364 ANKRD30AQ9BXX3 1397 aa30.15■■■□□ 2.42
HTATSF1-201ENST00000218364 B4GALNT3Q6L9W6 998 aa30.15■■■□□ 2.42
HTATSF1-201ENST00000218364 CEP170Q5SW79 1584 aa30.13■■■□□ 2.41
HTATSF1-201ENST00000218364 CHD1O14646 1710 aa30.12■■■□□ 2.41
HTATSF1-201ENST00000218364 PKD2Q13563 968 aa30.12■■■□□ 2.41
HTATSF1-201ENST00000218364 NUP160Q12769 1436 aa30.11■■■□□ 2.41
HTATSF1-201ENST00000218364 PLB1Q6P1J6 1458 aa30.11■■■□□ 2.41
HTATSF1-201ENST00000218364 RNF123Q5XPI4 1314 aa30.1■■■□□ 2.41
HTATSF1-201ENST00000218364 RALGAPBQ86X10 1494 aa30.09■■■□□ 2.41
HTATSF1-201ENST00000218364 ANKRD50Q9ULJ7 1429 aa30.09■■■□□ 2.41
HTATSF1-201ENST00000218364 ROCK2O75116 1388 aaKnown RBP30.09■■■□□ 2.41
HTATSF1-201ENST00000218364 NUDCQ9Y266 331 aa30.08■■■□□ 2.41
HTATSF1-201ENST00000218364 ARHGEF12Q9NZN5 1544 aa30.06■■■□□ 2.4
HTATSF1-201ENST00000218364 SHANK2Q9UPX8 1470 aa30.05■■■□□ 2.4
HTATSF1-201ENST00000218364 ERICH6Q7L0X2 663 aa30.03■■■□□ 2.4
HTATSF1-201ENST00000218364 ZNF777Q9ULD5 760 aaPredicted RBP30.03■■■□□ 2.4
HTATSF1-201ENST00000218364 KDM5DQ9BY66 1539 aa30.03■■■□□ 2.4
HTATSF1-201ENST00000218364 BCL11AQ9H165 835 aa30.02■■■□□ 2.4
HTATSF1-201ENST00000218364 ZNF326Q5BKZ1 582 aaKnown RBP30■■■□□ 2.39
HTATSF1-201ENST00000218364 PNISRQ8TF01 805 aaKnown RBP30■■■□□ 2.39
HTATSF1-201ENST00000218364 CARMIL2Q6F5E8 1435 aa29.99■■■□□ 2.39
HTATSF1-201ENST00000218364 CDC42BPAQ5VT25 1732 aa29.98■■■□□ 2.39
HTATSF1-201ENST00000218364 ABCC10Q5T3U5 1492 aa29.97■■■□□ 2.39
HTATSF1-201ENST00000218364 NUP155O75694 1391 aa29.96■■■□□ 2.39
HTATSF1-201ENST00000218364 C9orf84Q5VXU9 1444 aa29.95■■■□□ 2.39
HTATSF1-201ENST00000218364 JPH4Q96JJ6 628 aa29.94■■■□□ 2.38
HTATSF1-201ENST00000218364 POLR3GLQ9BT43 218 aa29.94■■■□□ 2.38
HTATSF1-201ENST00000218364 KIF15Q9NS87 1388 aa29.94■■■□□ 2.38
HTATSF1-201ENST00000218364 KTN1Q86UP2 1357 aaKnown RBP29.93■■■□□ 2.38
HTATSF1-201ENST00000218364 PTPRGP23470 1445 aa29.92■■■□□ 2.38
HTATSF1-201ENST00000218364 CARD11Q9BXL7 1154 aa29.92■■■□□ 2.38
HTATSF1-201ENST00000218364 LRPPRCP42704 1394 aaKnown RBP29.92■■■□□ 2.38
HTATSF1-201ENST00000218364 ABCA8O94911 1581 aa29.91■■■□□ 2.38
HTATSF1-201ENST00000218364 TMC1Q8TDI8 760 aa29.89■■■□□ 2.38
HTATSF1-201ENST00000218364 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
HTATSF1-201ENST00000218364 BRD4O60885 1362 aaPredicted RBP29.87■■■□□ 2.37
HTATSF1-201ENST00000218364 MYT1LQ9UL68 1186 aa29.86■■■□□ 2.37
HTATSF1-201ENST00000218364 ATP10BO94823 1461 aa29.85■■■□□ 2.37
HTATSF1-201ENST00000218364 E9PCH4 1651 aa29.85■■■□□ 2.37
HTATSF1-201ENST00000218364 ARHGEF5Q12774 1597 aa29.85■■■□□ 2.37
HTATSF1-201ENST00000218364 CNGB1Q14028 1251 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms