RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
MRPL28-201ENST00000199706 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
MRPL28-201ENST00000199706 ZMYM4Q5VZL5 1548 aa27.68■■■□□ 2.02
MRPL28-201ENST00000199706 EFCAB2Q5VUJ9 269 aa27.68■■■□□ 2.02
MRPL28-201ENST00000199706 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
MRPL28-201ENST00000199706 POGZQ7Z3K3 1410 aa27.64■■■□□ 2.02
MRPL28-201ENST00000199706 GPATCH8Q9UKJ3 1502 aaKnown RBP27.62■■■□□ 2.01
MRPL28-201ENST00000199706 MAGI2Q86UL8 1455 aa27.61■■■□□ 2.01
MRPL28-201ENST00000199706 SUPT6HQ7KZ85 1726 aaKnown RBP27.6■■■□□ 2.01
MRPL28-201ENST00000199706 SCAPERQ9BY12 1400 aa27.59■■■□□ 2.01
MRPL28-201ENST00000199706 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
MRPL28-201ENST00000199706 ABCC1P33527 1531 aa27.59■■■□□ 2.01
MRPL28-201ENST00000199706 ARHGEF40Q8TER5 1519 aa27.59■■■□□ 2.01
MRPL28-201ENST00000199706 RAPGEF3O95398 923 aa27.59■■■□□ 2.01
MRPL28-201ENST00000199706 LRRC9Q6ZRR7 1453 aa27.57■■■□□ 2
MRPL28-201ENST00000199706 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
MRPL28-201ENST00000199706 KDM5CP41229 1560 aa27.56■■■□□ 2
MRPL28-201ENST00000199706 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
MRPL28-201ENST00000199706 NCOA2Q15596 1464 aa27.52■■■□□ 2
MRPL28-201ENST00000199706 PLEKHH2Q8IVE3 1493 aa27.52■■■□□ 2
MRPL28-201ENST00000199706 SAMD9LQ8IVG5 1584 aa27.52■■■□□ 2
MRPL28-201ENST00000199706 ZFYVE16Q7Z3T8 1539 aa27.5■■□□□ 1.99
MRPL28-201ENST00000199706 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
MRPL28-201ENST00000199706 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
MRPL28-201ENST00000199706 HECW2Q9P2P5 1572 aa27.45■■□□□ 1.99
MRPL28-201ENST00000199706 CFDP1Q9UEE9 299 aaPredicted RBP27.44■■□□□ 1.98
MRPL28-201ENST00000199706 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
MRPL28-201ENST00000199706 SYCP2Q9BX26 1530 aa27.42■■□□□ 1.98
MRPL28-201ENST00000199706 KDM4FA0A1W2PPD8 638 aa27.4■■□□□ 1.98
MRPL28-201ENST00000199706 YEATS2Q9ULM3 1422 aa27.4■■□□□ 1.98
MRPL28-201ENST00000199706 TRAPPC8Q9Y2L5 1435 aa27.4■■□□□ 1.98
MRPL28-201ENST00000199706 APLP2Q06481 763 aa27.39■■□□□ 1.98
MRPL28-201ENST00000199706 REREQ9P2R6 1566 aa27.39■■□□□ 1.97
MRPL28-201ENST00000199706 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
MRPL28-201ENST00000199706 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
MRPL28-201ENST00000199706 ATP10AO60312 1499 aa27.35■■□□□ 1.97
MRPL28-201ENST00000199706 C9orf84Q5VXU9 1444 aa27.34■■□□□ 1.97
MRPL28-201ENST00000199706 BCORL1Q5H9F3 1711 aa27.34■■□□□ 1.97
MRPL28-201ENST00000199706 DIP2CQ9Y2E4 1556 aa27.34■■□□□ 1.97
MRPL28-201ENST00000199706 KIDINS220Q9ULH0 1771 aa27.33■■□□□ 1.97
MRPL28-201ENST00000199706 ADAMTSL3P82987 1691 aa27.33■■□□□ 1.97
MRPL28-201ENST00000199706 MIA2Q96PC5 1412 aa27.33■■□□□ 1.96
MRPL28-201ENST00000199706 MBD5Q9P267 1494 aa27.32■■□□□ 1.96
MRPL28-201ENST00000199706 ZNF777Q9ULD5 760 aaPredicted RBP27.32■■□□□ 1.96
MRPL28-201ENST00000199706 MYOM3Q5VTT5 1437 aa27.32■■□□□ 1.96
MRPL28-201ENST00000199706 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
MRPL28-201ENST00000199706 ABCA6Q8N139 1617 aa27.31■■□□□ 1.96
MRPL28-201ENST00000199706 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
MRPL28-201ENST00000199706 CAMSAP2Q08AD1 1489 aa27.31■■□□□ 1.96
MRPL28-201ENST00000199706 SIGLEC1Q9BZZ2 1709 aa27.29■■□□□ 1.96
MRPL28-201ENST00000199706 ARHGEF5Q12774 1597 aa27.28■■□□□ 1.96
MRPL28-201ENST00000199706 ATP7AQ04656 1500 aa27.26■■□□□ 1.96
MRPL28-201ENST00000199706 RSPH4AQ5TD94 716 aa27.25■■□□□ 1.95
MRPL28-201ENST00000199706 AGLP35573 1532 aa27.25■■□□□ 1.95
MRPL28-201ENST00000199706 CCDC141Q6ZP82 1450 aa27.25■■□□□ 1.95
MRPL28-201ENST00000199706 HNRNPMP52272 730 aaKnown RBP eCLIP27.24■■□□□ 1.953e-8■■■□□ 15.8
MRPL28-201ENST00000199706 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
MRPL28-201ENST00000199706 ZNF644Q9H582 1327 aaPredicted RBP27.23■■□□□ 1.95
MRPL28-201ENST00000199706 RTEL1-TNFRSF6BF6WH68 1400 aa27.23■■□□□ 1.95
MRPL28-201ENST00000199706 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
MRPL28-201ENST00000199706 ARID4BQ4LE39 1312 aaPredicted RBP27.18■■□□□ 1.94
MRPL28-201ENST00000199706 PLXNC1O60486 1568 aa27.18■■□□□ 1.94
MRPL28-201ENST00000199706 ADGBQ8N7X0 1667 aa27.17■■□□□ 1.94
MRPL28-201ENST00000199706 FGD6Q6ZV73 1430 aa27.15■■□□□ 1.94
MRPL28-201ENST00000199706 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.94
MRPL28-201ENST00000199706 PTPN23Q9H3S7 1636 aa27.14■■□□□ 1.94
MRPL28-201ENST00000199706 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
MRPL28-201ENST00000199706 MYT1LQ9UL68 1186 aa27.13■■□□□ 1.93
MRPL28-201ENST00000199706 PTPRMP28827 1452 aa27.12■■□□□ 1.93
MRPL28-201ENST00000199706 FER1L4A9Z1Z3 1794 aa27.12■■□□□ 1.93
MRPL28-201ENST00000199706 A2MP01023 1474 aa27.1■■□□□ 1.93
MRPL28-201ENST00000199706 RIMS1Q86UR5 1692 aaKnown RBP27.08■■□□□ 1.93
MRPL28-201ENST00000199706 SHANK2Q9UPX8 1470 aa27.08■■□□□ 1.93
MRPL28-201ENST00000199706 CROCC2H7BZ55 1655 aa27.07■■□□□ 1.92
MRPL28-201ENST00000199706 DNMT1P26358 1616 aaKnown RBP27.05■■□□□ 1.92
MRPL28-201ENST00000199706 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
MRPL28-201ENST00000199706 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
MRPL28-201ENST00000199706 DHX29Q7Z478 1369 aaKnown RBP27■■□□□ 1.91
MRPL28-201ENST00000199706 CNTLNQ9NXG0 1405 aa26.99■■□□□ 1.91
MRPL28-201ENST00000199706 ABCC5O15440 1437 aa26.98■■□□□ 1.91
MRPL28-201ENST00000199706 FAM135AQ9P2D6 1515 aa26.97■■□□□ 1.91
MRPL28-201ENST00000199706 DAPK1P53355 1430 aa26.97■■□□□ 1.91
MRPL28-201ENST00000199706 MROH2AA6NES4 1674 aa26.95■■□□□ 1.91
MRPL28-201ENST00000199706 MLECQ14165 292 aa26.95■■□□□ 1.9
MRPL28-201ENST00000199706 EIF2AK4Q9P2K8 1649 aaKnown RBP26.94■■□□□ 1.9
MRPL28-201ENST00000199706 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
MRPL28-201ENST00000199706 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
MRPL28-201ENST00000199706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.89■■□□□ 1.9
MRPL28-201ENST00000199706 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.9
MRPL28-201ENST00000199706 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
MRPL28-201ENST00000199706 C3P01024 1663 aa26.87■■□□□ 1.89
MRPL28-201ENST00000199706 ERBINQ96RT1 1412 aa26.84■■□□□ 1.89
MRPL28-201ENST00000199706 SETD1BQ9UPS6 1966 aaKnown RBP26.84■■□□□ 1.89
MRPL28-201ENST00000199706 ESF1Q9H501 851 aaKnown RBP26.83■■□□□ 1.89
MRPL28-201ENST00000199706 KIF15Q9NS87 1388 aa26.83■■□□□ 1.88
MRPL28-201ENST00000199706 CLTCQ00610 1675 aaKnown RBP26.82■■□□□ 1.88
MRPL28-201ENST00000199706 ANKRD30AQ9BXX3 1397 aa26.82■■□□□ 1.88
MRPL28-201ENST00000199706 NCOA1Q15788 1441 aa26.81■■□□□ 1.88
MRPL28-201ENST00000199706 KDM5DQ9BY66 1539 aa26.8■■□□□ 1.88
MRPL28-201ENST00000199706 PREX1Q8TCU6 1659 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms