RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 NEO1Q92859 1461 aa16.44■□□□□ 0.22
MRPS35-201ENST00000081029 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
MRPS35-201ENST00000081029 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
MRPS35-201ENST00000081029 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
MRPS35-201ENST00000081029 NCOA2Q15596 1464 aa16.4■□□□□ 0.22
MRPS35-201ENST00000081029 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
MRPS35-201ENST00000081029 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
MRPS35-201ENST00000081029 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.22
MRPS35-201ENST00000081029 ADGRL1O94910 1474 aa16.39■□□□□ 0.21
MRPS35-201ENST00000081029 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
MRPS35-201ENST00000081029 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
MRPS35-201ENST00000081029 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
MRPS35-201ENST00000081029 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
MRPS35-201ENST00000081029 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
MRPS35-201ENST00000081029 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
MRPS35-201ENST00000081029 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
MRPS35-201ENST00000081029 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
MRPS35-201ENST00000081029 HNRNPMP52272 730 aaKnown RBP eCLIP16.36■□□□□ 0.21
MRPS35-201ENST00000081029 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
MRPS35-201ENST00000081029 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
MRPS35-201ENST00000081029 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
MRPS35-201ENST00000081029 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
MRPS35-201ENST00000081029 TRAPPC8Q9Y2L5 1435 aa16.29■□□□□ 0.2
MRPS35-201ENST00000081029 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
MRPS35-201ENST00000081029 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
MRPS35-201ENST00000081029 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
MRPS35-201ENST00000081029 ABCC1P33527 1531 aa16.27■□□□□ 0.2
MRPS35-201ENST00000081029 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
MRPS35-201ENST00000081029 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.2
MRPS35-201ENST00000081029 ARID4BQ4LE39 1312 aaPredicted RBP16.26■□□□□ 0.19
MRPS35-201ENST00000081029 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
MRPS35-201ENST00000081029 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
MRPS35-201ENST00000081029 SPAG9O60271 1321 aaKnown RBP16.24■□□□□ 0.19
MRPS35-201ENST00000081029 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
MRPS35-201ENST00000081029 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
MRPS35-201ENST00000081029 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
MRPS35-201ENST00000081029 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
MRPS35-201ENST00000081029 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
MRPS35-201ENST00000081029 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
MRPS35-201ENST00000081029 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
MRPS35-201ENST00000081029 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
MRPS35-201ENST00000081029 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
MRPS35-201ENST00000081029 FGD6Q6ZV73 1430 aa16.2■□□□□ 0.18
MRPS35-201ENST00000081029 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
MRPS35-201ENST00000081029 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
MRPS35-201ENST00000081029 MLECQ14165 292 aa16.18■□□□□ 0.18
MRPS35-201ENST00000081029 KDM5CP41229 1560 aa16.18■□□□□ 0.18
MRPS35-201ENST00000081029 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
MRPS35-201ENST00000081029 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
MRPS35-201ENST00000081029 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
MRPS35-201ENST00000081029 ATP10AO60312 1499 aa16.16■□□□□ 0.18
MRPS35-201ENST00000081029 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
MRPS35-201ENST00000081029 CCDC141Q6ZP82 1450 aa16.15■□□□□ 0.18
MRPS35-201ENST00000081029 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
MRPS35-201ENST00000081029 ITGAEP38570 1179 aa16.14■□□□□ 0.17
MRPS35-201ENST00000081029 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
MRPS35-201ENST00000081029 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
MRPS35-201ENST00000081029 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
MRPS35-201ENST00000081029 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
MRPS35-201ENST00000081029 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
MRPS35-201ENST00000081029 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
MRPS35-201ENST00000081029 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
MRPS35-201ENST00000081029 ABCA6Q8N139 1617 aa16.1■□□□□ 0.17
MRPS35-201ENST00000081029 ARHGEF5Q12774 1597 aa16.1■□□□□ 0.17
MRPS35-201ENST00000081029 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
MRPS35-201ENST00000081029 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
MRPS35-201ENST00000081029 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
MRPS35-201ENST00000081029 ABCC5O15440 1437 aa16.09■□□□□ 0.17
MRPS35-201ENST00000081029 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
MRPS35-201ENST00000081029 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
MRPS35-201ENST00000081029 DAPK1P53355 1430 aa16.08■□□□□ 0.16
MRPS35-201ENST00000081029 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
MRPS35-201ENST00000081029 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
MRPS35-201ENST00000081029 GGT6Q6P531 493 aa16.06■□□□□ 0.16
MRPS35-201ENST00000081029 A2MP01023 1474 aa16.06■□□□□ 0.16
MRPS35-201ENST00000081029 ESF1Q9H501 851 aaKnown RBP16.05■□□□□ 0.16
MRPS35-201ENST00000081029 KIF3BO15066 747 aa16.04■□□□□ 0.16
MRPS35-201ENST00000081029 DNMT1P26358 1616 aaKnown RBP16.04■□□□□ 0.16
MRPS35-201ENST00000081029 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
MRPS35-201ENST00000081029 BCORL1Q5H9F3 1711 aa16.01■□□□□ 0.15
MRPS35-201ENST00000081029 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
MRPS35-201ENST00000081029 ANKRD30AQ9BXX3 1397 aa16.01■□□□□ 0.15
MRPS35-201ENST00000081029 KIF15Q9NS87 1388 aa16■□□□□ 0.15
MRPS35-201ENST00000081029 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
MRPS35-201ENST00000081029 REREQ9P2R6 1566 aa15.99■□□□□ 0.15
MRPS35-201ENST00000081029 MAST1Q9Y2H9 1570 aa15.99■□□□□ 0.15
MRPS35-201ENST00000081029 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
MRPS35-201ENST00000081029 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
MRPS35-201ENST00000081029 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
MRPS35-201ENST00000081029 AGLP35573 1532 aa15.98■□□□□ 0.15
MRPS35-201ENST00000081029 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
MRPS35-201ENST00000081029 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
MRPS35-201ENST00000081029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
MRPS35-201ENST00000081029 CEBPAP49715 358 aaPredicted RBP15.97■□□□□ 0.15
MRPS35-201ENST00000081029 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
MRPS35-201ENST00000081029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
MRPS35-201ENST00000081029 PLXNC1O60486 1568 aa15.96■□□□□ 0.15
MRPS35-201ENST00000081029 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
MRPS35-201ENST00000081029 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
MRPS35-201ENST00000081029 PTPRMP28827 1452 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms