RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PREX2Q70Z35 1606 aa33.08■■■□□ 2.89
HOXC8-201ENST00000040584 CDC42BPBQ9Y5S2 1711 aa33.08■■■□□ 2.89
HOXC8-201ENST00000040584 MYO5CQ9NQX4 1742 aa33.06■■■□□ 2.88
HOXC8-201ENST00000040584 CAMSAP2Q08AD1 1489 aa33.06■■■□□ 2.88
HOXC8-201ENST00000040584 ABCA9Q8IUA7 1624 aa33.03■■■□□ 2.88
HOXC8-201ENST00000040584 PLCH2O75038 1416 aa33.03■■■□□ 2.88
HOXC8-201ENST00000040584 ARHGAP5Q13017 1502 aa33.03■■■□□ 2.88
HOXC8-201ENST00000040584 DNAJC5Q9H3Z4 198 aa33.02■■■□□ 2.88
HOXC8-201ENST00000040584 PTPRKQ15262 1439 aa33■■■□□ 2.87
HOXC8-201ENST00000040584 SAMD9LQ8IVG5 1584 aa32.95■■■□□ 2.86
HOXC8-201ENST00000040584 EFCAB2Q5VUJ9 269 aa32.93■■■□□ 2.86
HOXC8-201ENST00000040584 ABCC5O15440 1437 aa32.92■■■□□ 2.86
HOXC8-201ENST00000040584 DAPK1P53355 1430 aa32.92■■■□□ 2.86
HOXC8-201ENST00000040584 DNMT1P26358 1616 aaKnown RBP32.91■■■□□ 2.86
HOXC8-201ENST00000040584 ARAP3Q8WWN8 1544 aa32.9■■■□□ 2.86
HOXC8-201ENST00000040584 HNRNPMP52272 730 aaKnown RBP eCLIP32.9■■■□□ 2.86
HOXC8-201ENST00000040584 CHIC2Q9UKJ5 165 aa32.89■■■□□ 2.86
HOXC8-201ENST00000040584 CD109Q6YHK3 1445 aa32.89■■■□□ 2.85
HOXC8-201ENST00000040584 MBD5Q9P267 1494 aa32.84■■■□□ 2.85
HOXC8-201ENST00000040584 FANCAO15360 1455 aa32.83■■■□□ 2.85
HOXC8-201ENST00000040584 FAM69CQ0P6D2 419 aa32.82■■■□□ 2.85
HOXC8-201ENST00000040584 SYCP2Q9BX26 1530 aa32.82■■■□□ 2.84
HOXC8-201ENST00000040584 GLI2P10070 1586 aa32.81■■■□□ 2.84
HOXC8-201ENST00000040584 DIP2BQ9P265 1576 aa32.81■■■□□ 2.84
HOXC8-201ENST00000040584 PLEKHH2Q8IVE3 1493 aa32.81■■■□□ 2.84
HOXC8-201ENST00000040584 KIAA1107Q9UPP5 1409 aa32.8■■■□□ 2.84
HOXC8-201ENST00000040584 ARHGEF5Q12774 1597 aa32.79■■■□□ 2.84
HOXC8-201ENST00000040584 SETD5Q9C0A6 1442 aa32.78■■■□□ 2.84
HOXC8-201ENST00000040584 ARHGEF12Q9NZN5 1544 aa32.78■■■□□ 2.84
HOXC8-201ENST00000040584 RRP7BPQ9NSQ0 103 aa32.77■■■□□ 2.84
HOXC8-201ENST00000040584 ABCC1P33527 1531 aa32.76■■■□□ 2.84
HOXC8-201ENST00000040584 AKNAQ7Z591 1439 aa32.76■■■□□ 2.84
HOXC8-201ENST00000040584 CROCC2H7BZ55 1655 aa32.76■■■□□ 2.83
HOXC8-201ENST00000040584 MAP3K4Q9Y6R4 1608 aa32.76■■■□□ 2.83
HOXC8-201ENST00000040584 RSPH4AQ5TD94 716 aa32.75■■■□□ 2.83
HOXC8-201ENST00000040584 CCDC141Q6ZP82 1450 aa32.75■■■□□ 2.83
HOXC8-201ENST00000040584 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
HOXC8-201ENST00000040584 RAB3GAP2Q9H2M9 1393 aa32.74■■■□□ 2.83
HOXC8-201ENST00000040584 TSPY4P0CV99 314 aa32.73■■■□□ 2.83
HOXC8-201ENST00000040584 TSPY10P0CW01 314 aa32.73■■■□□ 2.83
HOXC8-201ENST00000040584 NAIPQ13075 1403 aa32.71■■■□□ 2.83
HOXC8-201ENST00000040584 ROCK1Q13464 1354 aa32.71■■■□□ 2.83
HOXC8-201ENST00000040584 C9orf84Q5VXU9 1444 aa32.7■■■□□ 2.82
HOXC8-201ENST00000040584 SHANK2Q9UPX8 1470 aa32.69■■■□□ 2.82
HOXC8-201ENST00000040584 ADGRL1O94910 1474 aa32.69■■■□□ 2.82
HOXC8-201ENST00000040584 TRAPPC8Q9Y2L5 1435 aa32.68■■■□□ 2.82
HOXC8-201ENST00000040584 SCAPERQ9BY12 1400 aa32.66■■■□□ 2.82
HOXC8-201ENST00000040584 CFAP74Q9C0B2 1584 aa32.65■■■□□ 2.82
HOXC8-201ENST00000040584 NCOA1Q15788 1441 aa32.65■■■□□ 2.82
HOXC8-201ENST00000040584 ADGRL2O95490 1459 aa32.65■■■□□ 2.82
HOXC8-201ENST00000040584 ADGBQ8N7X0 1667 aa32.65■■■□□ 2.82
HOXC8-201ENST00000040584 KIF13AQ9H1H9 1805 aa32.64■■■□□ 2.82
HOXC8-201ENST00000040584 ANKRD30AQ9BXX3 1397 aa32.63■■■□□ 2.81
HOXC8-201ENST00000040584 AFAP1Q8N556 730 aa32.63■■■□□ 2.81
HOXC8-201ENST00000040584 CCER1Q8TC90 406 aaPredicted RBP32.63■■■□□ 2.81
HOXC8-201ENST00000040584 GCC2Q8IWJ2 1684 aa32.61■■■□□ 2.81
HOXC8-201ENST00000040584 NEO1Q92859 1461 aa32.61■■■□□ 2.81
HOXC8-201ENST00000040584 TSPOAP1O95153 1857 aa32.59■■■□□ 2.81
HOXC8-201ENST00000040584 MAST1Q9Y2H9 1570 aa32.57■■■□□ 2.8
HOXC8-201ENST00000040584 KDM6BO15054 1643 aa32.55■■■□□ 2.8
HOXC8-201ENST00000040584 PPRC1Q5VV67 1664 aaKnown RBP32.54■■■□□ 2.8
HOXC8-201ENST00000040584 SPAG9O60271 1321 aaKnown RBP32.53■■■□□ 2.8
HOXC8-201ENST00000040584 KIF15Q9NS87 1388 aa32.51■■■□□ 2.8
HOXC8-201ENST00000040584 DHX57Q6P158 1386 aaKnown RBP32.5■■■□□ 2.79
HOXC8-201ENST00000040584 TEX14Q8IWB6 1497 aa32.48■■■□□ 2.79
HOXC8-201ENST00000040584 POGZQ7Z3K3 1410 aa32.48■■■□□ 2.79
HOXC8-201ENST00000040584 ZNF518AQ6AHZ1 1483 aa32.48■■■□□ 2.79
HOXC8-201ENST00000040584 DENND4BO75064 1496 aaPredicted RBP32.45■■■□□ 2.79
HOXC8-201ENST00000040584 RTEL1-TNFRSF6BF6WH68 1400 aa32.45■■■□□ 2.78
HOXC8-201ENST00000040584 ANKRD50Q9ULJ7 1429 aa32.45■■■□□ 2.78
HOXC8-201ENST00000040584 RAPGEF3O95398 923 aa32.44■■■□□ 2.78
HOXC8-201ENST00000040584 ZFYVE16Q7Z3T8 1539 aa32.44■■■□□ 2.78
HOXC8-201ENST00000040584 PLXNC1O60486 1568 aa32.44■■■□□ 2.78
HOXC8-201ENST00000040584 MYT1LQ9UL68 1186 aa32.43■■■□□ 2.78
HOXC8-201ENST00000040584 TRHP20396 242 aaPredicted RBP32.42■■■□□ 2.78
HOXC8-201ENST00000040584 ATP7AQ04656 1500 aa32.41■■■□□ 2.78
HOXC8-201ENST00000040584 INO80Q9ULG1 1556 aaPredicted RBP32.4■■■□□ 2.78
HOXC8-201ENST00000040584 KDM5CP41229 1560 aa32.39■■■□□ 2.78
HOXC8-201ENST00000040584 TRIM52Q96A61 297 aa32.39■■■□□ 2.78
HOXC8-201ENST00000040584 RICTORQ6R327 1708 aa32.34■■■□□ 2.77
HOXC8-201ENST00000040584 DUOX2Q9NRD8 1548 aa32.34■■■□□ 2.77
HOXC8-201ENST00000040584 KIDINS220Q9ULH0 1771 aa32.34■■■□□ 2.77
HOXC8-201ENST00000040584 CLSPNQ9HAW4 1339 aa32.33■■■□□ 2.77
HOXC8-201ENST00000040584 MLH3Q9UHC1 1453 aa32.32■■■□□ 2.76
HOXC8-201ENST00000040584 ACIN1Q9UKV3 1341 aaKnown RBP32.31■■■□□ 2.76
HOXC8-201ENST00000040584 FRMPD1Q5SYB0 1578 aa32.3■■■□□ 2.76
HOXC8-201ENST00000040584 HECW2Q9P2P5 1572 aa32.3■■■□□ 2.76
HOXC8-201ENST00000040584 ERBINQ96RT1 1412 aa32.26■■■□□ 2.75
HOXC8-201ENST00000040584 COL17A1Q9UMD9 1497 aaPredicted RBP32.25■■■□□ 2.75
HOXC8-201ENST00000040584 MPHOSPH9Q99550 1183 aa32.23■■■□□ 2.75
HOXC8-201ENST00000040584 DHX29Q7Z478 1369 aaKnown RBP32.2■■■□□ 2.75
HOXC8-201ENST00000040584 NUP155O75694 1391 aa32.19■■■□□ 2.74
HOXC8-201ENST00000040584 ABCA6Q8N139 1617 aa32.18■■■□□ 2.74
HOXC8-201ENST00000040584 ZMYM4Q5VZL5 1548 aa32.18■■■□□ 2.74
HOXC8-201ENST00000040584 A2MP01023 1474 aa32.16■■■□□ 2.74
HOXC8-201ENST00000040584 PZPP20742 1482 aa32.16■■■□□ 2.74
HOXC8-201ENST00000040584 SLC4A1APQ9BWU0 796 aaKnown RBP32.16■■■□□ 2.74
HOXC8-201ENST00000040584 YEATS2Q9ULM3 1422 aa32.16■■■□□ 2.74
HOXC8-201ENST00000040584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.14■■■□□ 2.74
HOXC8-201ENST00000040584 DIP2CQ9Y2E4 1556 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms