RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 AKNAQ7Z591 1439 aa18.79■□□□□ 0.6
SYPL1-201ENST00000011473 NEO1Q92859 1461 aa18.79■□□□□ 0.6
SYPL1-201ENST00000011473 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
SYPL1-201ENST00000011473 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
SYPL1-201ENST00000011473 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
SYPL1-201ENST00000011473 PREX2Q70Z35 1606 aa18.77■□□□□ 0.6
SYPL1-201ENST00000011473 CFDP1Q9UEE9 299 aaPredicted RBP18.77■□□□□ 0.6
SYPL1-201ENST00000011473 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.6
SYPL1-201ENST00000011473 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
SYPL1-201ENST00000011473 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
SYPL1-201ENST00000011473 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
SYPL1-201ENST00000011473 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
SYPL1-201ENST00000011473 PHLDB1Q86UU1 1377 aa18.73■□□□□ 0.59
SYPL1-201ENST00000011473 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
SYPL1-201ENST00000011473 DENND4BO75064 1496 aaPredicted RBP18.7■□□□□ 0.58
SYPL1-201ENST00000011473 SAMD9LQ8IVG5 1584 aa18.7■□□□□ 0.58
SYPL1-201ENST00000011473 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
SYPL1-201ENST00000011473 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
SYPL1-201ENST00000011473 AFAP1Q8N556 730 aa18.68■□□□□ 0.58
SYPL1-201ENST00000011473 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
SYPL1-201ENST00000011473 ITSN2Q9NZM3 1697 aa18.68■□□□□ 0.58
SYPL1-201ENST00000011473 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
SYPL1-201ENST00000011473 ABCC1P33527 1531 aa18.67■□□□□ 0.58
SYPL1-201ENST00000011473 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
SYPL1-201ENST00000011473 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
SYPL1-201ENST00000011473 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
SYPL1-201ENST00000011473 CAMSAP2Q08AD1 1489 aa18.63■□□□□ 0.57
SYPL1-201ENST00000011473 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
SYPL1-201ENST00000011473 ZNF518AQ6AHZ1 1483 aa18.61■□□□□ 0.57
SYPL1-201ENST00000011473 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
SYPL1-201ENST00000011473 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
SYPL1-201ENST00000011473 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
SYPL1-201ENST00000011473 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
SYPL1-201ENST00000011473 MBD5Q9P267 1494 aa18.59■□□□□ 0.57
SYPL1-201ENST00000011473 PLEKHH2Q8IVE3 1493 aa18.59■□□□□ 0.57
SYPL1-201ENST00000011473 YEATS2Q9ULM3 1422 aa18.58■□□□□ 0.56
SYPL1-201ENST00000011473 KDM5CP41229 1560 aa18.56■□□□□ 0.56
SYPL1-201ENST00000011473 PTPN23Q9H3S7 1636 aa18.56■□□□□ 0.56
SYPL1-201ENST00000011473 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
SYPL1-201ENST00000011473 FAM50AQ14320 339 aaKnown RBP18.55■□□□□ 0.56
SYPL1-201ENST00000011473 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
SYPL1-201ENST00000011473 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
SYPL1-201ENST00000011473 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
SYPL1-201ENST00000011473 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.55
SYPL1-201ENST00000011473 ARHGEF40Q8TER5 1519 aa18.51■□□□□ 0.55
SYPL1-201ENST00000011473 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
SYPL1-201ENST00000011473 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
SYPL1-201ENST00000011473 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
SYPL1-201ENST00000011473 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
SYPL1-201ENST00000011473 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 ATP7AQ04656 1500 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 ABCC5O15440 1437 aa18.47■□□□□ 0.55
SYPL1-201ENST00000011473 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
SYPL1-201ENST00000011473 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
SYPL1-201ENST00000011473 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
SYPL1-201ENST00000011473 DAPK1P53355 1430 aa18.46■□□□□ 0.55
SYPL1-201ENST00000011473 ITGAEP38570 1179 aa18.46■□□□□ 0.55
SYPL1-201ENST00000011473 INO80Q9ULG1 1556 aaPredicted RBP18.45■□□□□ 0.54
SYPL1-201ENST00000011473 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
SYPL1-201ENST00000011473 ATP10AO60312 1499 aa18.44■□□□□ 0.54
SYPL1-201ENST00000011473 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
SYPL1-201ENST00000011473 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
SYPL1-201ENST00000011473 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
SYPL1-201ENST00000011473 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
SYPL1-201ENST00000011473 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
SYPL1-201ENST00000011473 MLECQ14165 292 aa18.4■□□□□ 0.54
SYPL1-201ENST00000011473 PTPRKQ15262 1439 aa18.4■□□□□ 0.54
SYPL1-201ENST00000011473 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
SYPL1-201ENST00000011473 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
SYPL1-201ENST00000011473 A2MP01023 1474 aa18.37■□□□□ 0.53
SYPL1-201ENST00000011473 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
SYPL1-201ENST00000011473 CROCC2H7BZ55 1655 aa18.37■□□□□ 0.53
SYPL1-201ENST00000011473 MAST1Q9Y2H9 1570 aa18.36■□□□□ 0.53
SYPL1-201ENST00000011473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.532e-8■□□□□ 11
SYPL1-201ENST00000011473 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
SYPL1-201ENST00000011473 DHX29Q7Z478 1369 aaKnown RBP18.33■□□□□ 0.53
SYPL1-201ENST00000011473 REREQ9P2R6 1566 aa18.33■□□□□ 0.53
SYPL1-201ENST00000011473 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.52
SYPL1-201ENST00000011473 PLXNC1O60486 1568 aa18.33■□□□□ 0.52
SYPL1-201ENST00000011473 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
SYPL1-201ENST00000011473 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
SYPL1-201ENST00000011473 KIF3BO15066 747 aa18.31■□□□□ 0.52
SYPL1-201ENST00000011473 GGT6Q6P531 493 aa18.3■□□□□ 0.52
SYPL1-201ENST00000011473 AGLP35573 1532 aa18.29■□□□□ 0.52
SYPL1-201ENST00000011473 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
SYPL1-201ENST00000011473 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
SYPL1-201ENST00000011473 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
SYPL1-201ENST00000011473 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
SYPL1-201ENST00000011473 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
SYPL1-201ENST00000011473 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
SYPL1-201ENST00000011473 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
SYPL1-201ENST00000011473 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
SYPL1-201ENST00000011473 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
SYPL1-201ENST00000011473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
SYPL1-201ENST00000011473 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
SYPL1-201ENST00000011473 RIMS1Q86UR5 1692 aaKnown RBP18.19■□□□□ 0.5
SYPL1-201ENST00000011473 CEBPAP49715 358 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms