RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 EIF4G2P78344 907 aaKnown RBP eCLIP5.69□□□□□ -1.5
CFTR-201ENST00000003084 GSE1Q14687 1217 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
CFTR-201ENST00000003084 DCBLD2Q96PD2 775 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 RTL5Q5HYW3 569 aaPredicted RBP5.68□□□□□ -1.5
CFTR-201ENST00000003084 NCAPD3P42695 1498 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 TDRD9Q8NDG6 1382 aaKnown RBP5.67□□□□□ -1.5
CFTR-201ENST00000003084 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
CFTR-201ENST00000003084 VPS8Q8N3P4 1428 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 CFAP53Q96M91 514 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 EFCAB2Q5VUJ9 269 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 RSPH4AQ5TD94 716 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 C1QBPQ07021 282 aaKnown RBP5.65□□□□□ -1.51
CFTR-201ENST00000003084 CCDC18Q5T9S5 1454 aa5.65□□□□□ -1.51
CFTR-201ENST00000003084 POGKQ9P215 609 aa5.64□□□□□ -1.51
CFTR-201ENST00000003084 BCL11AQ9H165 835 aa5.64□□□□□ -1.51
CFTR-201ENST00000003084 DDX10Q13206 875 aaKnown RBP5.63□□□□□ -1.51
CFTR-201ENST00000003084 NPM2Q86SE8 214 aaKnown RBP5.63□□□□□ -1.51
CFTR-201ENST00000003084 ANKRD30AQ9BXX3 1397 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 TIMELESSQ9UNS1 1208 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 CARD11Q9BXL7 1154 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 KNSTRNQ9Y448 316 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 RGL3Q3MIN7 710 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 C3orf67Q6ZVT6 689 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 ZNF710Q8N1W2 664 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 PNNQ9H307 717 aaKnown RBP5.62□□□□□ -1.51
CFTR-201ENST00000003084 U3KPZ7 1027 aaPredicted RBP5.62□□□□□ -1.51
CFTR-201ENST00000003084 SETD5Q9C0A6 1442 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 FAM9BQ8IZU0 186 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 HMGXB3Q12766 1538 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 MYH16Q9H6N6 1097 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 RBM19Q9Y4C8 960 aaKnown RBP5.61□□□□□ -1.51
CFTR-201ENST00000003084 GAPVD1Q14C86 1478 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 HNRNPUQ00839 825 aaKnown RBP eCLIP5.61□□□□□ -1.51
CFTR-201ENST00000003084 WWC1Q8IX03 1113 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 JPH4Q96JJ6 628 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 MRC2Q9UBG0 1479 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 UPF2Q9HAU5 1272 aaKnown RBP5.61□□□□□ -1.51
CFTR-201ENST00000003084 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE2BA6NHP3 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE6P0CI01 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE2Q495Y8 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 NUDCQ9Y266 331 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 PYGBP11216 843 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 FGD5Q6ZNL6 1462 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 PTPRGP23470 1445 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 HOXD11P31277 338 aaPredicted RBP5.6□□□□□ -1.51
CFTR-201ENST00000003084 TMF1P82094 1093 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 TPRNQ4KMQ1 711 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
CFTR-201ENST00000003084 ANP32AP39687 249 aaKnown RBP5.59□□□□□ -1.51
CFTR-201ENST00000003084 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 SMYD5Q6GMV2 418 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 IFT140Q96RY7 1462 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 CC2D2AQ9P2K1 1620 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 ZRANB1Q9UGI0 708 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 EIF5BO60841 1220 aaKnown RBP5.59□□□□□ -1.51
CFTR-201ENST00000003084 MLECQ14165 292 aa5.59□□□□□ -1.52
CFTR-201ENST00000003084 EIF3AQ14152 1382 aaKnown RBP5.59□□□□□ -1.52
CFTR-201ENST00000003084 FHOD3Q2V2M9 1422 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 SPAG9O60271 1321 aaKnown RBP5.58□□□□□ -1.52
CFTR-201ENST00000003084 GRIN2BQ13224 1484 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 GTF3C3Q9Y5Q9 886 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 MAPK8IP3Q9UPT6 1336 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 A0A0G2JS52 829 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 GGT6Q6P531 493 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 CHMP4BQ9H444 224 aaKnown RBP5.57□□□□□ -1.52
CFTR-201ENST00000003084 EID1Q9Y6B2 187 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 TMC2Q8TDI7 906 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 CFTRP13569 1480 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 UACAQ9BZF9 1416 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 HDGFL2Q7Z4V5 671 aaPredicted RBP5.56□□□□□ -1.52
CFTR-201ENST00000003084 PKD2Q13563 968 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 TTLL12Q14166 644 aaPredicted RBP5.55□□□□□ -1.52
CFTR-201ENST00000003084 NUP155O75694 1391 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 CUX1P39880 1505 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 PRKCSHP14314 528 aaPredicted RBP5.55□□□□□ -1.52
CFTR-201ENST00000003084 CHADLQ6NUI6 762 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 POTEDQ86YR6 584 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 MS4A1P11836 297 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 RAD54L2Q9Y4B4 1467 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 TTC16Q8NEE8 873 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 HSP90AA1P07900 732 aaKnown RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 PLCG2P16885 1265 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 SRPK2P78362 688 aaKnown RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 LMOD2Q6P5Q4 547 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 UPF1Q92900 1129 aaKnown RBP eCLIP5.54□□□□□ -1.52
CFTR-201ENST00000003084 SALL2Q9Y467 1007 aaPredicted RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 WASHC2CQ9Y4E1 1318 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 IGF1RP08069 1367 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 KIF3BO15066 747 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 HNRNPMP52272 730 aaKnown RBP eCLIP5.54□□□□□ -1.52
CFTR-201ENST00000003084 MPHOSPH9Q99550 1183 aa5.53□□□□□ -1.52
CFTR-201ENST00000003084 PCDHB13Q9Y5F0 798 aa5.53□□□□□ -1.52
CFTR-201ENST00000003084 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
CFTR-201ENST00000003084 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
CFTR-201ENST00000003084 CCDC136Q96JN2 1154 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms