RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 EIF4G2P78344 907 aaKnown RBP eCLIP5.69□□□□□ -1.5
CFTR-201ENST00000003084 GSE1Q14687 1217 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
CFTR-201ENST00000003084 DCBLD2Q96PD2 775 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 RTL5Q5HYW3 569 aaPredicted RBP5.68□□□□□ -1.5
CFTR-201ENST00000003084 NCAPD3P42695 1498 aa5.68□□□□□ -1.5
CFTR-201ENST00000003084 TDRD9Q8NDG6 1382 aaKnown RBP5.67□□□□□ -1.5
CFTR-201ENST00000003084 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
CFTR-201ENST00000003084 VPS8Q8N3P4 1428 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 CFAP53Q96M91 514 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 EFCAB2Q5VUJ9 269 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 RSPH4AQ5TD94 716 aa5.66□□□□□ -1.5
CFTR-201ENST00000003084 C1QBPQ07021 282 aaKnown RBP5.65□□□□□ -1.51
CFTR-201ENST00000003084 CCDC18Q5T9S5 1454 aa5.65□□□□□ -1.51
CFTR-201ENST00000003084 POGKQ9P215 609 aa5.64□□□□□ -1.51
CFTR-201ENST00000003084 BCL11AQ9H165 835 aa5.64□□□□□ -1.51
CFTR-201ENST00000003084 DDX10Q13206 875 aaKnown RBP5.63□□□□□ -1.51
CFTR-201ENST00000003084 NPM2Q86SE8 214 aaKnown RBP5.63□□□□□ -1.51
CFTR-201ENST00000003084 ANKRD30AQ9BXX3 1397 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 TIMELESSQ9UNS1 1208 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 CARD11Q9BXL7 1154 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 KNSTRNQ9Y448 316 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 RGL3Q3MIN7 710 aa5.63□□□□□ -1.51
CFTR-201ENST00000003084 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 C3orf67Q6ZVT6 689 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 ZNF710Q8N1W2 664 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 PNNQ9H307 717 aaKnown RBP5.62□□□□□ -1.51
CFTR-201ENST00000003084 U3KPZ7 1027 aaPredicted RBP5.62□□□□□ -1.51
CFTR-201ENST00000003084 SETD5Q9C0A6 1442 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 FAM9BQ8IZU0 186 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 HMGXB3Q12766 1538 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 MYH16Q9H6N6 1097 aa5.62□□□□□ -1.51
CFTR-201ENST00000003084 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 RBM19Q9Y4C8 960 aaKnown RBP5.61□□□□□ -1.51
CFTR-201ENST00000003084 GAPVD1Q14C86 1478 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 HNRNPUQ00839 825 aaKnown RBP eCLIP5.61□□□□□ -1.51
CFTR-201ENST00000003084 WWC1Q8IX03 1113 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 JPH4Q96JJ6 628 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 MRC2Q9UBG0 1479 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 UPF2Q9HAU5 1272 aaKnown RBP5.61□□□□□ -1.51
CFTR-201ENST00000003084 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE2BA6NHP3 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE6P0CI01 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 SPDYE2Q495Y8 402 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 NUDCQ9Y266 331 aa5.61□□□□□ -1.51
CFTR-201ENST00000003084 PYGBP11216 843 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 FGD5Q6ZNL6 1462 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 PTPRGP23470 1445 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 HOXD11P31277 338 aaPredicted RBP5.6□□□□□ -1.51
CFTR-201ENST00000003084 TMF1P82094 1093 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 TPRNQ4KMQ1 711 aa5.6□□□□□ -1.51
CFTR-201ENST00000003084 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
CFTR-201ENST00000003084 ANP32AP39687 249 aaKnown RBP5.59□□□□□ -1.51
CFTR-201ENST00000003084 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 SMYD5Q6GMV2 418 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 IFT140Q96RY7 1462 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 CC2D2AQ9P2K1 1620 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 ZRANB1Q9UGI0 708 aa5.59□□□□□ -1.51
CFTR-201ENST00000003084 EIF5BO60841 1220 aaKnown RBP5.59□□□□□ -1.51
CFTR-201ENST00000003084 MLECQ14165 292 aa5.59□□□□□ -1.52
CFTR-201ENST00000003084 EIF3AQ14152 1382 aaKnown RBP5.59□□□□□ -1.52
CFTR-201ENST00000003084 FHOD3Q2V2M9 1422 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 SPAG9O60271 1321 aaKnown RBP5.58□□□□□ -1.52
CFTR-201ENST00000003084 GRIN2BQ13224 1484 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 GTF3C3Q9Y5Q9 886 aa5.58□□□□□ -1.52
CFTR-201ENST00000003084 MAPK8IP3Q9UPT6 1336 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 A0A0G2JS52 829 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 GGT6Q6P531 493 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 CHMP4BQ9H444 224 aaKnown RBP5.57□□□□□ -1.52
CFTR-201ENST00000003084 EID1Q9Y6B2 187 aa5.57□□□□□ -1.52
CFTR-201ENST00000003084 TMC2Q8TDI7 906 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 CFTRP13569 1480 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 UACAQ9BZF9 1416 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 HDGFL2Q7Z4V5 671 aaPredicted RBP5.56□□□□□ -1.52
CFTR-201ENST00000003084 PKD2Q13563 968 aa5.56□□□□□ -1.52
CFTR-201ENST00000003084 TTLL12Q14166 644 aaPredicted RBP5.55□□□□□ -1.52
CFTR-201ENST00000003084 NUP155O75694 1391 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 CUX1P39880 1505 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 PRKCSHP14314 528 aaPredicted RBP5.55□□□□□ -1.52
CFTR-201ENST00000003084 CHADLQ6NUI6 762 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 POTEDQ86YR6 584 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 MS4A1P11836 297 aa5.55□□□□□ -1.52
CFTR-201ENST00000003084 RAD54L2Q9Y4B4 1467 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 TTC16Q8NEE8 873 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 HSP90AA1P07900 732 aaKnown RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 PLCG2P16885 1265 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 SRPK2P78362 688 aaKnown RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 LMOD2Q6P5Q4 547 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 UPF1Q92900 1129 aaKnown RBP eCLIP5.54□□□□□ -1.52
CFTR-201ENST00000003084 SALL2Q9Y467 1007 aaPredicted RBP5.54□□□□□ -1.52
CFTR-201ENST00000003084 WASHC2CQ9Y4E1 1318 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 IGF1RP08069 1367 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 KIF3BO15066 747 aa5.54□□□□□ -1.52
CFTR-201ENST00000003084 HNRNPMP52272 730 aaKnown RBP eCLIP5.54□□□□□ -1.52
CFTR-201ENST00000003084 MPHOSPH9Q99550 1183 aa5.53□□□□□ -1.52
CFTR-201ENST00000003084 PCDHB13Q9Y5F0 798 aa5.53□□□□□ -1.52
CFTR-201ENST00000003084 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
CFTR-201ENST00000003084 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
CFTR-201ENST00000003084 CCDC136Q96JN2 1154 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms