RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Gm13697A2AK42 830 aa12.53□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Dhx9O70133 1380 aaKnown RBP12.53□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Arhgap31A6X8Z5 1425 aa12.53□□□□□ -0.4
Hmgcs1-201ENSMUST00000179869 Calr4Q3TQS0 420 aa12.52□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Myt1Q8CFC2 1127 aa12.52□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Cc2d2bA0A286YDU8 1405 aa12.51□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Znf710Q3U288 666 aa12.5□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Polr1aO35134 1717 aaKnown RBP12.5□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Abcc5Q9R1X5 1436 aa12.5□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Arhgef40Q3UPH7 1517 aa12.5□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Mug1P28665 1476 aa12.49□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Anp32aO35381 247 aa12.49□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Dennd4bQ3U1Y4 1499 aa12.48□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Plekhh2Q8C115 1491 aa12.48□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Arid3cA6PWV5 409 aa12.47□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Ttll5Q8CHB8 1328 aa12.47□□□□□ -0.41
Hmgcs1-201ENSMUST00000179869 Soga1E1U8D0 1418 aa12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Map4P27546 1125 aaKnown RBP12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Ncoa2Q61026 1462 aa12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Nolc1E9Q5C9 702 aaKnown RBP12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Rundc1Q0VDN7 615 aa12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Ift140E9PY46 1464 aa12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Exoc6Q8R313 802 aa12.45□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Neo1P97798 1493 aa12.44□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Jph4Q80WT0 628 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 NrdcQ8BHG1 1161 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Adgrb2Q8CGM1 1561 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Ppp4r2Q0VGB7 417 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Naip5Q9R016 1403 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Kdm6bQ5NCY0 1641 aa12.43□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 UacaQ8CGB3 1411 aa12.42□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Ankrd36D3Z4K0 1415 aa12.42□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Os9Q8K2C7 672 aa12.41□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Pbrm1Q8BSQ9 1634 aaKnown RBP12.41□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Sart1Q9Z315 806 aaKnown RBP12.41□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Abca5Q8K448 1642 aa12.4□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Card11Q8CIS0 1159 aa12.4□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Kdm2aP59997 1161 aa12.4□□□□□ -0.42
Hmgcs1-201ENSMUST00000179869 Shroom2A2ALU4 1481 aa12.39□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Nup155Q99P88 1391 aaKnown RBP12.38□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Ttbk1Q6PCN3 1308 aa12.38□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Lmtk2Q3TYD6 1471 aa12.38□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Prex2Q3LAC4 1598 aa12.37□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Peg3Q3URU2 1571 aa12.37□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Smg6P61406 1418 aaKnown RBP12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Nup160Q9Z0W3 1402 aaKnown RBP12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Rad21Q61550 635 aaKnown RBP12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Abca16E9PWJ7 1678 aa12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Adamts12Q811B3 1600 aa12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Ecm2Q5FW85 670 aa12.36□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Setd1bQ8CFT2 1985 aa12.35□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Map3k5O35099 1380 aa12.35□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Ifit1bl1D3Z6F0 470 aa12.34□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Slc4a2P13808 1237 aaKnown RBP12.34□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 Slc4a3P16283 1227 aa12.33□□□□□ -0.43
Hmgcs1-201ENSMUST00000179869 DiexfQ8BTT6 772 aaKnown RBP12.33□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Magi1Q6RHR9 1471 aa12.33□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Abcc2Q8VI47 1543 aa12.33□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Adcy10Q8C0T9 1614 aa12.32□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Rapgef6Q5NCJ1 1609 aa12.31□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Dhx57Q6P5D3 1388 aaKnown RBP12.31□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 SphkapQ6NSW3 1687 aa12.31□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Dapk1Q80YE7 1442 aa12.31□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Ccdc141E9Q8Q6 1531 aa12.31□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Trappc8E9PWG2 1437 aa12.3□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Wdr43Q6ZQL4 677 aaKnown RBP12.3□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Plppr3Q7TPB0 716 aa12.3□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Stk24Q99KH8 431 aa12.3□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Sall3Q62255 1320 aa12.28□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Supt16hQ920B9 1047 aa12.28□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Bcl11aQ9QYE3 773 aa12.28□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Mroh3A0A1D5RM54 893 aa12.27□□□□□ -0.44
Hmgcs1-201ENSMUST00000179869 Rusc2Q80U22 1514 aa12.26□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Arhgef11Q68FM7 1552 aa12.26□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Cnga1P29974 684 aa12.25□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Rprd2Q6NXI6 1469 aaKnown RBP12.25□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Fam163aQ8CAA5 168 aa12.25□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Kcnh8P59111 1102 aa12.24□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Kif3bQ61771 747 aa12.24□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 AlkP97793 1621 aa12.24□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Ofd1Q80Z25 1017 aa12.24□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Arhgap5P97393 1501 aa12.23□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Mroh2aD3Z750 1679 aa12.23□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Fgd6Q69ZL1 1399 aa12.22□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Il16O54824 1322 aa12.22□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Washc2Q6PGL7 1334 aa12.22□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Gcc2Q8CHG3 1679 aa12.22□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Q7TT23 1179 aa12.22□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Kdm3bQ6ZPY7 1562 aa12.21□□□□□ -0.45
Hmgcs1-201ENSMUST00000179869 Spag9Q58A65 1321 aaKnown RBP12.2□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Zcchc11B2RX14 1644 aaKnown RBP12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Znf608Q56A10 1511 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Cdk13Q69ZA1 1511 aaKnown RBP12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Pak3Q61036 559 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Inpp5dQ9ES52 1191 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Gm14025A2AP89 1413 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Pde4cQ3UEI1 686 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Ncoa1P70365 1447 aa12.19□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Rpgrip1lQ8CG73 1264 aa12.18□□□□□ -0.46
Hmgcs1-201ENSMUST00000179869 Rfx7F8VPJ6 1459 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms