RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Fkbp15Q6P9Q6 1216 aaKnown RBP15.74■□□□□ 0.11
Lig1-211ENSMUST00000177588 Sin3aQ60520 1274 aaKnown RBP15.73■□□□□ 0.11
Lig1-211ENSMUST00000177588 A2mQ6GQT1 1474 aa15.72■□□□□ 0.11
Lig1-211ENSMUST00000177588 Dennd4bQ3U1Y4 1499 aa15.72■□□□□ 0.11
Lig1-211ENSMUST00000177588 Fgd6Q69ZL1 1399 aa15.71■□□□□ 0.11
Lig1-211ENSMUST00000177588 BC005561E9Q5E2 1589 aa15.69■□□□□ 0.1
Lig1-211ENSMUST00000177588 Arhgap31A6X8Z5 1425 aa15.69■□□□□ 0.1
Lig1-211ENSMUST00000177588 Neo1P97798 1493 aa15.69■□□□□ 0.1
Lig1-211ENSMUST00000177588 DiexfQ8BTT6 772 aaKnown RBP15.68■□□□□ 0.1
Lig1-211ENSMUST00000177588 Jph4Q80WT0 628 aa15.68■□□□□ 0.1
Lig1-211ENSMUST00000177588 Pprc1Q6NZN1 1644 aa15.68■□□□□ 0.1
Lig1-211ENSMUST00000177588 Bcl11aQ9QYE3 773 aa15.67■□□□□ 0.1
Lig1-211ENSMUST00000177588 NexmifQ5DTT1 1515 aa15.67■□□□□ 0.1
Lig1-211ENSMUST00000177588 Ncoa3O09000 1398 aa15.67■□□□□ 0.1
Lig1-211ENSMUST00000177588 Rapgef6Q5NCJ1 1609 aa15.66■□□□□ 0.1
Lig1-211ENSMUST00000177588 Mug1P28665 1476 aa15.66■□□□□ 0.1
Lig1-211ENSMUST00000177588 Washc2Q6PGL7 1334 aa15.65■□□□□ 0.1
Lig1-211ENSMUST00000177588 Rtl5Q5DTT4 599 aa15.65■□□□□ 0.1
Lig1-211ENSMUST00000177588 Chic2Q9D9G3 165 aa15.65■□□□□ 0.1
Lig1-211ENSMUST00000177588 Map3k4O08648 1597 aa15.65■□□□□ 0.1
Lig1-211ENSMUST00000177588 Setbp1Q9Z180 1582 aa15.64■□□□□ 0.09
Lig1-211ENSMUST00000177588 Dnmt1P13864 1620 aaKnown RBP15.63■□□□□ 0.09
Lig1-211ENSMUST00000177588 Slc24a1Q91WD8 1130 aa15.63■□□□□ 0.09
Lig1-211ENSMUST00000177588 Kif21bQ9QXL1 1668 aa15.61■□□□□ 0.09
Lig1-211ENSMUST00000177588 Ube2uB1AUC4 352 aa15.61■□□□□ 0.09
Lig1-211ENSMUST00000177588 Supt16hQ920B9 1047 aa15.61■□□□□ 0.09
Lig1-211ENSMUST00000177588 Ccdc141E9Q8Q6 1531 aa15.6■□□□□ 0.09
Lig1-211ENSMUST00000177588 Arhgef11Q68FM7 1552 aa15.57■□□□□ 0.08
Lig1-211ENSMUST00000177588 Pelp1Q9DBD5 1123 aaKnown RBP15.57■□□□□ 0.08
Lig1-211ENSMUST00000177588 Arhgef12Q8R4H2 1543 aaKnown RBP15.56■□□□□ 0.08
Lig1-211ENSMUST00000177588 Magi1Q6RHR9 1471 aa15.56■□□□□ 0.08
Lig1-211ENSMUST00000177588 Rfx7F8VPJ6 1459 aa15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Gm14025A2AP89 1413 aa15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Ncoa1P70365 1447 aa15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Dhx57Q6P5D3 1388 aaKnown RBP15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Mphosph9A6H5Y1 991 aa15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Wdr43Q6ZQL4 677 aaKnown RBP15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Fam163aQ8CAA5 168 aa15.55■□□□□ 0.08
Lig1-211ENSMUST00000177588 Ppp4r2Q0VGB7 417 aa15.54■□□□□ 0.08
Lig1-211ENSMUST00000177588 Lamc1P02468 1607 aaKnown RBP15.53■□□□□ 0.08
Lig1-211ENSMUST00000177588 Cdc42bpaQ3UU96 1719 aa15.53■□□□□ 0.08
Lig1-211ENSMUST00000177588 Cabp1Q9JLK7 227 aa15.52■□□□□ 0.08
Lig1-211ENSMUST00000177588 Mrs2Q5NCE8 434 aa15.52■□□□□ 0.08
Lig1-211ENSMUST00000177588 Slc4a2P13808 1237 aaKnown RBP15.51■□□□□ 0.07
Lig1-211ENSMUST00000177588 Zcchc11B2RX14 1644 aaKnown RBP15.51■□□□□ 0.07
Lig1-211ENSMUST00000177588 Mroh2aD3Z750 1679 aa15.51■□□□□ 0.07
Lig1-211ENSMUST00000177588 Eif5bQ05D44 1216 aaKnown RBP15.5■□□□□ 0.07
Lig1-211ENSMUST00000177588 Abcc1O35379 1528 aa15.5■□□□□ 0.07
Lig1-211ENSMUST00000177588 Gm13695A2AK44 830 aa15.5■□□□□ 0.07
Lig1-211ENSMUST00000177588 Ifnlr1Q8CGK5 535 aa15.5■□□□□ 0.07
Lig1-211ENSMUST00000177588 Prex2Q3LAC4 1598 aa15.49■□□□□ 0.07
Lig1-211ENSMUST00000177588 Arhgef40Q3UPH7 1517 aa15.49■□□□□ 0.07
Lig1-211ENSMUST00000177588 Kiaa1551Q5DTW7 1521 aa15.49■□□□□ 0.07
Lig1-211ENSMUST00000177588 Rrbp1Q99PL5 1605 aaKnown RBP15.48■□□□□ 0.07
Lig1-211ENSMUST00000177588 Rprd2Q6NXI6 1469 aaKnown RBP15.47■□□□□ 0.07
Lig1-211ENSMUST00000177588 Abcc5Q9R1X5 1436 aa15.47■□□□□ 0.07
Lig1-211ENSMUST00000177588 Mtus2Q3UHD3 1353 aa15.47■□□□□ 0.07
Lig1-211ENSMUST00000177588 Plekhh2Q8C115 1491 aa15.47■□□□□ 0.07
Lig1-211ENSMUST00000177588 Usp47Q8BY87 1376 aa15.46■□□□□ 0.07
Lig1-211ENSMUST00000177588 Wwc2Q6NXJ0 1187 aa15.46■□□□□ 0.06
Lig1-211ENSMUST00000177588 Mapkbp1Q6NS57 1503 aa15.45■□□□□ 0.06
Lig1-211ENSMUST00000177588 Tdrd9Q14BI7 1383 aa15.45■□□□□ 0.06
Lig1-211ENSMUST00000177588 Adcy10Q8C0T9 1614 aa15.45■□□□□ 0.06
Lig1-211ENSMUST00000177588 Exoc6Q8R313 802 aa15.44■□□□□ 0.06
Lig1-211ENSMUST00000177588 Fancd2Q80V62 1450 aa15.44■□□□□ 0.06
Lig1-211ENSMUST00000177588 Pkd2O35245 966 aa15.42■□□□□ 0.06
Lig1-211ENSMUST00000177588 NrdcQ8BHG1 1161 aa15.42■□□□□ 0.06
Lig1-211ENSMUST00000177588 Kdm6bQ5NCY0 1641 aa15.42■□□□□ 0.06
Lig1-211ENSMUST00000177588 PnisrA2AJT4 805 aaKnown RBP15.42■□□□□ 0.06
Lig1-211ENSMUST00000177588 Liat1Q810M6 228 aa15.41■□□□□ 0.06
Lig1-211ENSMUST00000177588 Pabpn1Q8CCS6 302 aaKnown RBP15.41■□□□□ 0.06
Lig1-211ENSMUST00000177588 P3h3Q8CG70 732 aa15.41■□□□□ 0.06
Lig1-211ENSMUST00000177588 Chd1P40201 1711 aa15.4■□□□□ 0.06
Lig1-211ENSMUST00000177588 Zfp644E9QA22 1323 aa15.39■□□□□ 0.05
Lig1-211ENSMUST00000177588 Ythdc2B2RR83 1445 aaKnown RBP15.39■□□□□ 0.05
Lig1-211ENSMUST00000177588 Pak3Q61036 559 aa15.38■□□□□ 0.05
Lig1-211ENSMUST00000177588 Mlh3A0A1Y7VMP7 1443 aa15.38■□□□□ 0.05
Lig1-211ENSMUST00000177588 Pik3c2gO70167 1506 aa15.38■□□□□ 0.05
Lig1-211ENSMUST00000177588 Il16O54824 1322 aa15.35■□□□□ 0.05
Lig1-211ENSMUST00000177588 Caskin1Q6P9K8 1431 aa15.34■□□□□ 0.05
Lig1-211ENSMUST00000177588 Egfem1Q8C088 590 aa15.33■□□□□ 0.04
Lig1-211ENSMUST00000177588 Plekhg5Q66T02 1073 aa15.32■□□□□ 0.04
Lig1-211ENSMUST00000177588 SphkapQ6NSW3 1687 aa15.32■□□□□ 0.04
Lig1-211ENSMUST00000177588 Atp10dQ8K2X1 1416 aa15.31■□□□□ 0.04
Lig1-211ENSMUST00000177588 Arhgap5P97393 1501 aa15.31■□□□□ 0.04
Lig1-211ENSMUST00000177588 Gapvd1Q6PAR5 1458 aa15.31■□□□□ 0.04
Lig1-211ENSMUST00000177588 Arid3cA6PWV5 409 aa15.31■□□□□ 0.04
Lig1-211ENSMUST00000177588 Kdm3bQ6ZPY7 1562 aa15.31■□□□□ 0.04
Lig1-211ENSMUST00000177588 Igf1rQ60751 1373 aa15.3■□□□□ 0.04
Lig1-211ENSMUST00000177588 Adgrb2Q8CGM1 1561 aa15.3■□□□□ 0.04
Lig1-211ENSMUST00000177588 Mbd5B1AYB6 1498 aa15.3■□□□□ 0.04
Lig1-211ENSMUST00000177588 Fam208aQ69ZR9 1610 aaKnown RBP15.3■□□□□ 0.04
Lig1-211ENSMUST00000177588 Cwc22Q8C5N3 908 aaKnown RBP15.29■□□□□ 0.04
Lig1-211ENSMUST00000177588 PtprtQ99M80 1454 aa15.29■□□□□ 0.04
Lig1-211ENSMUST00000177588 NhsB1AV60 1647 aa15.28■□□□□ 0.04
Lig1-211ENSMUST00000177588 Ofd1Q80Z25 1017 aa15.28■□□□□ 0.04
Lig1-211ENSMUST00000177588 Sart1Q9Z315 806 aaKnown RBP15.28■□□□□ 0.04
Lig1-211ENSMUST00000177588 Kif14L0N7N1 1674 aaKnown RBP15.27■□□□□ 0.04
Lig1-211ENSMUST00000177588 AlkP97793 1621 aa15.27■□□□□ 0.04
Lig1-211ENSMUST00000177588 Zbtb7cQ8VCZ7 619 aa15.27■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms