RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Exoc6Q8R313 802 aa10.16□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Crocc2F6XLV1 1638 aa10.16□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Naip5Q9R016 1403 aa10.15□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Grwd1Q810D6 446 aaKnown RBP10.15□□□□□ -0.78
Bdnf-207ENSMUST00000111047 NeflP08551 543 aa10.15□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Ift140E9PY46 1464 aa10.14□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Zfp644E9QA22 1323 aa10.14□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Clstn2Q9ER65 966 aa10.14□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Trak1Q6PD31 939 aa10.13□□□□□ -0.79
Bdnf-207ENSMUST00000111047 NexmifQ5DTT1 1515 aa10.13□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Ncoa2Q61026 1462 aa10.13□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Gpatch8A2A6A1 1505 aa10.12□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Rundc1Q0VDN7 615 aa10.12□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Ofd1Q80Z25 1017 aa10.12□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Mrc2Q64449 1479 aa10.12□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Camsap2Q8C1B1 1461 aa10.11□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Dhx57Q6P5D3 1388 aaKnown RBP10.11□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Fam135aQ6NS59 1506 aa10.11□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Plcd4Q8K3R3 807 aa10.11□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Thoc2B1AZI6 1594 aaKnown RBP10.1□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Grin2aP35436 1464 aa10.1□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Plb1Q3TTY0 1478 aa10.1□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Map4P27546 1125 aaKnown RBP10.1□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Os9Q8K2C7 672 aa10.1□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Pla2r1Q62028 1487 aa10.09□□□□□ -0.79
Bdnf-207ENSMUST00000111047 Rfx7F8VPJ6 1459 aa10.08□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Cc2d2bA0A286YDU8 1405 aa10.08□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Abcc5Q9R1X5 1436 aa10.08□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Lmtk2Q3TYD6 1471 aa10.08□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Nolc1E9Q5C9 702 aaKnown RBP10.08□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Soga1E1U8D0 1418 aa10.07□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Nup155Q99P88 1391 aaKnown RBP10.07□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Mug1P28665 1476 aa10.07□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Rrp7aQ9D1C9 280 aaKnown RBP10.07□□□□□ -0.8
Bdnf-207ENSMUST00000111047 BC005561E9Q5E2 1589 aa10.07□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Erich6D3Z6S9 713 aa10.06□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Dapk1Q80YE7 1442 aa10.06□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Gtf3c3Q3TMP1 882 aa10.05□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Supt16hQ920B9 1047 aa10.05□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Tdrd9Q14BI7 1383 aa10.05□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Slc4a2P13808 1237 aaKnown RBP10.04□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Upf2A2AT37 1269 aaKnown RBP10.04□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Rprd2Q6NXI6 1469 aaKnown RBP10.04□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Il16O54824 1322 aa10.04□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Arhgap31A6X8Z5 1425 aa10.03□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Ncoa1P70365 1447 aa10.03□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Rad21Q61550 635 aaKnown RBP10.02□□□□□ -0.8
Bdnf-207ENSMUST00000111047 Magi3Q9EQJ9 1476 aa10.02□□□□□ -0.81
Bdnf-207ENSMUST00000111047 WizO88286 1684 aaKnown RBP10.01□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Dhx9O70133 1380 aaKnown RBP10.01□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Disp1Q3TDN0 1521 aa10.01□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Ncoa3O09000 1398 aa10.01□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Ttll5Q8CHB8 1328 aa10□□□□□ -0.81
Bdnf-207ENSMUST00000111047 PxdnQ3UQ28 1475 aa10□□□□□ -0.81
Bdnf-207ENSMUST00000111047 PnisrA2AJT4 805 aaKnown RBP10□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Abca5Q8K448 1642 aa10□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Kif21aQ9QXL2 1672 aa9.99□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Rock2P70336 1388 aa9.99□□□□□ -0.81
Bdnf-207ENSMUST00000111047 AknaQ80VW7 1404 aa9.99□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Washc2Q6PGL7 1334 aa9.99□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Fam163aQ8CAA5 168 aa9.99□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Mroh3A0A1D5RM54 893 aa9.98□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Plekhg5Q66T02 1073 aa9.98□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Pik3c2gO70167 1506 aa9.98□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Gcc2Q8CHG3 1679 aa9.97□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Slc4a3P16283 1227 aa9.97□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Jph4Q80WT0 628 aa9.97□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Zscan21Q07231 555 aa9.97□□□□□ -0.81
Bdnf-207ENSMUST00000111047 Dennd4bQ3U1Y4 1499 aa9.96□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Ifit1bl1D3Z6F0 470 aa9.96□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Plppr3Q7TPB0 716 aa9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Nlrp6Q91WS2 869 aa9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Sart1Q9Z315 806 aaKnown RBP9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Rapgef6Q5NCJ1 1609 aa9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Magi1Q6RHR9 1471 aa9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Ccdc141E9Q8Q6 1531 aa9.95□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Arhgef40Q3UPH7 1517 aa9.94□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Kdm2aP59997 1161 aa9.94□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Mak16Q8BGS0 296 aaKnown RBP9.94□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Myom3A2ABU4 1439 aa9.94□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Adamts12Q811B3 1600 aa9.94□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Tcerg1Q8CGF7 1100 aaKnown RBP9.93□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Cul7Q8VE73 1689 aa9.93□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Fhod3Q76LL6 1578 aa9.93□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Prdm10Q3UTQ7 1184 aa9.91□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Shroom2A2ALU4 1481 aa9.91□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Kdm3bQ6ZPY7 1562 aa9.91□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Mlh3A0A1Y7VMP7 1443 aa9.91□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Irx3P81067 507 aa9.9□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Adgrb2Q8CGM1 1561 aa9.9□□□□□ -0.82
Bdnf-207ENSMUST00000111047 Nup160Q9Z0W3 1402 aaKnown RBP9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Rpgrip1lQ8CG73 1264 aa9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Adcy10Q8C0T9 1614 aa9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Tmf1B9EKI3 1091 aa9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Arhgef12Q8R4H2 1543 aaKnown RBP9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Dnajc5bQ9CQ94 199 aa9.89□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Pank3Q8R2W9 370 aa9.88□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Pprc1Q6NZN1 1644 aa9.88□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Zfp777B9EKF4 885 aa9.88□□□□□ -0.83
Bdnf-207ENSMUST00000111047 Caskin1Q6P9K8 1431 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms