RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mrc2Q64449 1479 aa17.86■□□□□ 0.45
Nup88-203ENSMUST00000108531 Pkd2O35245 966 aa17.86■□□□□ 0.45
Nup88-203ENSMUST00000108531 Disp1Q3TDN0 1521 aa17.85■□□□□ 0.45
Nup88-203ENSMUST00000108531 PxdnQ3UQ28 1475 aa17.85■□□□□ 0.45
Nup88-203ENSMUST00000108531 Lamc1P02468 1607 aaKnown RBP17.85■□□□□ 0.45
Nup88-203ENSMUST00000108531 Plb1Q3TTY0 1478 aa17.83■□□□□ 0.44
Nup88-203ENSMUST00000108531 Pik3c2gO70167 1506 aa17.82■□□□□ 0.44
Nup88-203ENSMUST00000108531 Rapgef6Q5NCJ1 1609 aa17.82■□□□□ 0.44
Nup88-203ENSMUST00000108531 Arhgef40Q3UPH7 1517 aa17.82■□□□□ 0.44
Nup88-203ENSMUST00000108531 Ncoa3O09000 1398 aa17.81■□□□□ 0.44
Nup88-203ENSMUST00000108531 Abca16E9PWJ7 1678 aa17.81■□□□□ 0.44
Nup88-203ENSMUST00000108531 Kif21bQ9QXL1 1668 aa17.81■□□□□ 0.44
Nup88-203ENSMUST00000108531 Gm13695A2AK44 830 aa17.81■□□□□ 0.44
Nup88-203ENSMUST00000108531 Zfp644E9QA22 1323 aa17.8■□□□□ 0.44
Nup88-203ENSMUST00000108531 Mrs2Q5NCE8 434 aa17.8■□□□□ 0.44
Nup88-203ENSMUST00000108531 WrnO09053 1401 aa17.8■□□□□ 0.44
Nup88-203ENSMUST00000108531 Washc2Q6PGL7 1334 aa17.79■□□□□ 0.44
Nup88-203ENSMUST00000108531 Kdm6bQ5NCY0 1641 aa17.79■□□□□ 0.44
Nup88-203ENSMUST00000108531 Mtus2Q3UHD3 1353 aa17.78■□□□□ 0.44
Nup88-203ENSMUST00000108531 SphkapQ6NSW3 1687 aa17.78■□□□□ 0.44
Nup88-203ENSMUST00000108531 Nolc1E9Q5C9 702 aaKnown RBP17.78■□□□□ 0.44
Nup88-203ENSMUST00000108531 Kdm3bQ6ZPY7 1562 aa17.78■□□□□ 0.44
Nup88-203ENSMUST00000108531 Adcy10Q8C0T9 1614 aa17.75■□□□□ 0.43
Nup88-203ENSMUST00000108531 Il16O54824 1322 aa17.75■□□□□ 0.43
Nup88-203ENSMUST00000108531 Arhgef11Q68FM7 1552 aa17.75■□□□□ 0.43
Nup88-203ENSMUST00000108531 Cdc42bpaQ3UU96 1719 aa17.74■□□□□ 0.43
Nup88-203ENSMUST00000108531 Slc4a2P13808 1237 aaKnown RBP17.74■□□□□ 0.43
Nup88-203ENSMUST00000108531 AlkP97793 1621 aa17.74■□□□□ 0.43
Nup88-203ENSMUST00000108531 Setd1bQ8CFT2 1985 aa17.74■□□□□ 0.43
Nup88-203ENSMUST00000108531 Pbrm1Q8BSQ9 1634 aaKnown RBP17.73■□□□□ 0.43
Nup88-203ENSMUST00000108531 Arhgef12Q8R4H2 1543 aaKnown RBP17.73■□□□□ 0.43
Nup88-203ENSMUST00000108531 Kiaa1551Q5DTW7 1521 aa17.71■□□□□ 0.43
Nup88-203ENSMUST00000108531 Exoc6Q8R313 802 aa17.71■□□□□ 0.43
Nup88-203ENSMUST00000108531 Mbd5B1AYB6 1498 aa17.71■□□□□ 0.43
Nup88-203ENSMUST00000108531 NrdcQ8BHG1 1161 aa17.71■□□□□ 0.42
Nup88-203ENSMUST00000108531 Nup160Q9Z0W3 1402 aaKnown RBP17.7■□□□□ 0.42
Nup88-203ENSMUST00000108531 Rtl5Q5DTT4 599 aa17.7■□□□□ 0.42
Nup88-203ENSMUST00000108531 Adgrb2Q8CGM1 1561 aa17.7■□□□□ 0.42
Nup88-203ENSMUST00000108531 Eif5bQ05D44 1216 aaKnown RBP17.69■□□□□ 0.42
Nup88-203ENSMUST00000108531 Wwc2Q6NXJ0 1187 aa17.69■□□□□ 0.42
Nup88-203ENSMUST00000108531 Wdr43Q6ZQL4 677 aaKnown RBP17.67■□□□□ 0.42
Nup88-203ENSMUST00000108531 Kif14L0N7N1 1674 aaKnown RBP17.67■□□□□ 0.42
Nup88-203ENSMUST00000108531 Map3k4O08648 1597 aa17.67■□□□□ 0.42
Nup88-203ENSMUST00000108531 PnisrA2AJT4 805 aaKnown RBP17.66■□□□□ 0.42
Nup88-203ENSMUST00000108531 Shroom2A2ALU4 1481 aa17.66■□□□□ 0.42
Nup88-203ENSMUST00000108531 Cwc22Q8C5N3 908 aaKnown RBP17.66■□□□□ 0.42
Nup88-203ENSMUST00000108531 Supt16hQ920B9 1047 aa17.66■□□□□ 0.42
Nup88-203ENSMUST00000108531 Abcc2Q8VI47 1543 aa17.65■□□□□ 0.42
Nup88-203ENSMUST00000108531 Cc2d2bA0A286YDU8 1405 aa17.64■□□□□ 0.42
Nup88-203ENSMUST00000108531 Plekhg5Q66T02 1073 aa17.64■□□□□ 0.42
Nup88-203ENSMUST00000108531 Dhx9O70133 1380 aaKnown RBP17.64■□□□□ 0.41
Nup88-203ENSMUST00000108531 Dapk1Q80YE7 1442 aa17.64■□□□□ 0.41
Nup88-203ENSMUST00000108531 Dhx57Q6P5D3 1388 aaKnown RBP17.64■□□□□ 0.41
Nup88-203ENSMUST00000108531 Ppp4r2Q0VGB7 417 aa17.63■□□□□ 0.41
Nup88-203ENSMUST00000108531 Supt6hQ62383 1726 aaKnown RBP17.63■□□□□ 0.41
Nup88-203ENSMUST00000108531 Naip6Q9JIB6 1403 aa17.62■□□□□ 0.41
Nup88-203ENSMUST00000108531 Mug2P28666 1451 aa17.62■□□□□ 0.41
Nup88-203ENSMUST00000108531 Arhgap27A2AB59 869 aa17.61■□□□□ 0.41
Nup88-203ENSMUST00000108531 Arhgap31A6X8Z5 1425 aa17.6■□□□□ 0.41
Nup88-203ENSMUST00000108531 Rgl3Q3UYI5 709 aa17.6■□□□□ 0.41
Nup88-203ENSMUST00000108531 Pelp1Q9DBD5 1123 aaKnown RBP17.6■□□□□ 0.41
Nup88-203ENSMUST00000108531 DroshaQ5HZJ0 1373 aaKnown RBP17.59■□□□□ 0.41
Nup88-203ENSMUST00000108531 Mapkbp1Q6NS57 1503 aa17.59■□□□□ 0.41
Nup88-203ENSMUST00000108531 Magi1Q6RHR9 1471 aa17.59■□□□□ 0.41
Nup88-203ENSMUST00000108531 Ttll5Q8CHB8 1328 aa17.59■□□□□ 0.41
Nup88-203ENSMUST00000108531 Trpm2Q91YD4 1506 aa17.59■□□□□ 0.41
Nup88-203ENSMUST00000108531 Myom3A2ABU4 1439 aa17.57■□□□□ 0.4
Nup88-203ENSMUST00000108531 Wdr7Q920I9 1489 aa17.56■□□□□ 0.4
Nup88-203ENSMUST00000108531 Rundc1Q0VDN7 615 aa17.56■□□□□ 0.4
Nup88-203ENSMUST00000108531 Ccdc141E9Q8Q6 1531 aa17.56■□□□□ 0.4
Nup88-203ENSMUST00000108531 Mroh2aD3Z750 1679 aa17.55■□□□□ 0.4
Nup88-203ENSMUST00000108531 Mlh3A0A1Y7VMP7 1443 aa17.55■□□□□ 0.4
Nup88-203ENSMUST00000108531 Trak1Q6PD31 939 aa17.54■□□□□ 0.4
Nup88-203ENSMUST00000108531 Fam163aQ8CAA5 168 aa17.54■□□□□ 0.4
Nup88-203ENSMUST00000108531 P3h3Q8CG70 732 aa17.54■□□□□ 0.4
Nup88-203ENSMUST00000108531 Prex2Q3LAC4 1598 aa17.54■□□□□ 0.4
Nup88-203ENSMUST00000108531 Card11Q8CIS0 1159 aa17.54■□□□□ 0.4
Nup88-203ENSMUST00000108531 RalgapbQ8BQZ4 1484 aa17.53■□□□□ 0.4
Nup88-203ENSMUST00000108531 Nup155Q99P88 1391 aaKnown RBP17.53■□□□□ 0.4
Nup88-203ENSMUST00000108531 Caskin1Q6P9K8 1431 aa17.52■□□□□ 0.4
Nup88-203ENSMUST00000108531 Cdk13Q69ZA1 1511 aaKnown RBP17.52■□□□□ 0.39
Nup88-203ENSMUST00000108531 Tdrd9Q14BI7 1383 aa17.5■□□□□ 0.39
Nup88-203ENSMUST00000108531 Ofd1Q80Z25 1017 aa17.49■□□□□ 0.39
Nup88-203ENSMUST00000108531 Rock2P70336 1388 aa17.49■□□□□ 0.39
Nup88-203ENSMUST00000108531 Cpsf1Q9EPU4 1441 aaKnown RBP17.49■□□□□ 0.39
Nup88-203ENSMUST00000108531 Fmn2Q9JL04 1578 aa17.49■□□□□ 0.39
Nup88-203ENSMUST00000108531 Zcchc11B2RX14 1644 aaKnown RBP17.45■□□□□ 0.38
Nup88-203ENSMUST00000108531 Iqgap1Q9JKF1 1657 aaKnown RBP17.45■□□□□ 0.38
Nup88-203ENSMUST00000108531 Dot1lQ6XZL8 1540 aa17.44■□□□□ 0.38
Nup88-203ENSMUST00000108531 Map4P27546 1125 aaKnown RBP17.44■□□□□ 0.38
Nup88-203ENSMUST00000108531 Grwd1Q810D6 446 aaKnown RBP17.43■□□□□ 0.38
Nup88-203ENSMUST00000108531 Liat1Q810M6 228 aa17.43■□□□□ 0.38
Nup88-203ENSMUST00000108531 Polr3aB2RXC6 1390 aa17.43■□□□□ 0.38
Nup88-203ENSMUST00000108531 Asxl1P59598 1514 aa17.43■□□□□ 0.38
Nup88-203ENSMUST00000108531 Adgrl2Q8JZZ7 1487 aa17.41■□□□□ 0.38
Nup88-203ENSMUST00000108531 Rock1P70335 1354 aa17.41■□□□□ 0.38
Nup88-203ENSMUST00000108531 PtprgQ05909 1442 aa17.4■□□□□ 0.38
Nup88-203ENSMUST00000108531 Lrrc9Q8CDN9 1456 aa17.4■□□□□ 0.38
Nup88-203ENSMUST00000108531 L3mbtl2P59178 703 aa17.4■□□□□ 0.38
Nup88-203ENSMUST00000108531 Lrriq1Q0P5X1 1673 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms