RNA–Protein interactions for RNA: ENSMUST00000100640.4

Sqle-202, Transcript of Squalene monooxygenase, mousemouse

TSL 1 (best) BASIC

Gene Sqle, Length 2,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-202ENSMUST00000100640 LrpprcQ6PB66 1392 aaKnown RBP16.61■□□□□ 0.25
Sqle-202ENSMUST00000100640 Tcerg1Q8CGF7 1100 aaKnown RBP16.61■□□□□ 0.25
Sqle-202ENSMUST00000100640 Amer1Q7TS75 1132 aa16.61■□□□□ 0.25
Sqle-202ENSMUST00000100640 Ofd1Q80Z25 1017 aa16.59■□□□□ 0.25
Sqle-202ENSMUST00000100640 Hsp90aa1P07901 733 aaKnown RBP16.59■□□□□ 0.25
Sqle-202ENSMUST00000100640 Fhod3Q76LL6 1578 aa16.58■□□□□ 0.24
Sqle-202ENSMUST00000100640 Ccnb3Q810T2 1396 aa16.58■□□□□ 0.24
Sqle-202ENSMUST00000100640 Gtf3c3Q3TMP1 882 aa16.56■□□□□ 0.24
Sqle-202ENSMUST00000100640 Kcnh8P59111 1102 aa16.55■□□□□ 0.24
Sqle-202ENSMUST00000100640 PogzQ8BZH4 1409 aaKnown RBP16.55■□□□□ 0.24
Sqle-202ENSMUST00000100640 Usp47Q8BY87 1376 aa16.54■□□□□ 0.24
Sqle-202ENSMUST00000100640 Arhgap27A2AB59 869 aa16.53■□□□□ 0.24
Sqle-202ENSMUST00000100640 L3mbtl2P59178 703 aa16.53■□□□□ 0.24
Sqle-202ENSMUST00000100640 Irx3P81067 507 aa16.51■□□□□ 0.23
Sqle-202ENSMUST00000100640 EprsQ8CGC7 1512 aaKnown RBP16.51■□□□□ 0.23
Sqle-202ENSMUST00000100640 Pkd2O35245 966 aa16.5■□□□□ 0.23
Sqle-202ENSMUST00000100640 Duox2A2AQ99 1517 aa16.5■□□□□ 0.23
Sqle-202ENSMUST00000100640 Plb1Q3TTY0 1478 aa16.49■□□□□ 0.23
Sqle-202ENSMUST00000100640 Setbp1Q9Z180 1582 aa16.48■□□□□ 0.23
Sqle-202ENSMUST00000100640 Rprd2Q6NXI6 1469 aaKnown RBP16.48■□□□□ 0.23
Sqle-202ENSMUST00000100640 Lmtk2Q3TYD6 1471 aa16.47■□□□□ 0.23
Sqle-202ENSMUST00000100640 Iqcf3Q9D498 203 aa16.46■□□□□ 0.23
Sqle-202ENSMUST00000100640 Mug1P28665 1476 aa16.45■□□□□ 0.22
Sqle-202ENSMUST00000100640 Plekhg5Q66T02 1073 aa16.44■□□□□ 0.22
Sqle-202ENSMUST00000100640 Cwc22Q8C5N3 908 aaKnown RBP16.44■□□□□ 0.22
Sqle-202ENSMUST00000100640 Disp1Q3TDN0 1521 aa16.43■□□□□ 0.22
Sqle-202ENSMUST00000100640 Polr1aO35134 1717 aaKnown RBP16.43■□□□□ 0.22
Sqle-202ENSMUST00000100640 Zfp644E9QA22 1323 aa16.41■□□□□ 0.22
Sqle-202ENSMUST00000100640 Plcd4Q8K3R3 807 aa16.41■□□□□ 0.22
Sqle-202ENSMUST00000100640 Cabp1Q9JLK7 227 aa16.41■□□□□ 0.22
Sqle-202ENSMUST00000100640 Rfx7F8VPJ6 1459 aa16.41■□□□□ 0.22
Sqle-202ENSMUST00000100640 ChgaP26339 463 aaKnown RBP16.41■□□□□ 0.22
Sqle-202ENSMUST00000100640 4933416C03RikQ3V063 378 aa16.4■□□□□ 0.22
Sqle-202ENSMUST00000100640 SynmQ70IV5 1561 aa16.4■□□□□ 0.22
Sqle-202ENSMUST00000100640 Samd9lQ69Z37 1561 aa16.39■□□□□ 0.21
Sqle-202ENSMUST00000100640 Ift140E9PY46 1464 aa16.39■□□□□ 0.21
Sqle-202ENSMUST00000100640 DaxxO35613 739 aa16.38■□□□□ 0.21
Sqle-202ENSMUST00000100640 NeflP08551 543 aa16.37■□□□□ 0.21
Sqle-202ENSMUST00000100640 Eif4g3Q80XI3 1579 aaKnown RBP16.37■□□□□ 0.21
Sqle-202ENSMUST00000100640 Kank1E9Q238 1360 aa16.35■□□□□ 0.21
Sqle-202ENSMUST00000100640 Pik3c2gO70167 1506 aa16.35■□□□□ 0.21
Sqle-202ENSMUST00000100640 Fgd1P52734 960 aa16.35■□□□□ 0.21
Sqle-202ENSMUST00000100640 Kif27Q7M6Z4 1394 aa16.35■□□□□ 0.21
Sqle-202ENSMUST00000100640 Dapk1Q80YE7 1442 aa16.35■□□□□ 0.21
Sqle-202ENSMUST00000100640 Erbb3Q61526 1339 aa16.34■□□□□ 0.21
Sqle-202ENSMUST00000100640 Mink1Q9JM52 1308 aa16.34■□□□□ 0.21
Sqle-202ENSMUST00000100640 Rundc1Q0VDN7 615 aa16.34■□□□□ 0.21
Sqle-202ENSMUST00000100640 NexmifQ5DTT1 1515 aa16.33■□□□□ 0.21
Sqle-202ENSMUST00000100640 Myom3A2ABU4 1439 aa16.33■□□□□ 0.21
Sqle-202ENSMUST00000100640 Rgl3Q3UYI5 709 aa16.33■□□□□ 0.2
Sqle-202ENSMUST00000100640 Gcc2Q8CHG3 1679 aa16.32■□□□□ 0.2
Sqle-202ENSMUST00000100640 Prkrip1Q9CWV6 186 aaKnown RBP16.32■□□□□ 0.2
Sqle-202ENSMUST00000100640 Card11Q8CIS0 1159 aa16.3■□□□□ 0.2
Sqle-202ENSMUST00000100640 Anp32bQ9EST5 272 aaKnown RBP16.3■□□□□ 0.2
Sqle-202ENSMUST00000100640 Gpatch8A2A6A1 1505 aa16.3■□□□□ 0.2
Sqle-202ENSMUST00000100640 Abcc5Q9R1X5 1436 aa16.29■□□□□ 0.2
Sqle-202ENSMUST00000100640 Rad54l2Q99NG0 1466 aa16.29■□□□□ 0.2
Sqle-202ENSMUST00000100640 Plekhh2Q8C115 1491 aa16.28■□□□□ 0.2
Sqle-202ENSMUST00000100640 BC005561E9Q5E2 1589 aa16.27■□□□□ 0.2
Sqle-202ENSMUST00000100640 Zfp444Q3TDV8 331 aaKnown RBP16.26■□□□□ 0.19
Sqle-202ENSMUST00000100640 Naip6Q9JIB6 1403 aa16.26■□□□□ 0.19
Sqle-202ENSMUST00000100640 Ttll13A4Q9F6 804 aa16.25■□□□□ 0.19
Sqle-202ENSMUST00000100640 CanxP35564 591 aaKnown RBP16.25■□□□□ 0.19
Sqle-202ENSMUST00000100640 Mbd5B1AYB6 1498 aa16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 Rpgrip1lQ8CG73 1264 aa16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 Dhx9O70133 1380 aaKnown RBP16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 Rock2P70336 1388 aa16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 CadpsQ80TJ1 1355 aa16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 Setd1bQ8CFT2 1985 aa16.24■□□□□ 0.19
Sqle-202ENSMUST00000100640 Abca5Q8K448 1642 aa16.23■□□□□ 0.19
Sqle-202ENSMUST00000100640 TnikP83510 1323 aa16.23■□□□□ 0.19
Sqle-202ENSMUST00000100640 Mug2P28666 1451 aa16.23■□□□□ 0.19
Sqle-202ENSMUST00000100640 Arhgef12Q8R4H2 1543 aaKnown RBP16.23■□□□□ 0.19
Sqle-202ENSMUST00000100640 Mak16Q8BGS0 296 aaKnown RBP16.22■□□□□ 0.19
Sqle-202ENSMUST00000100640 Zscan21Q07231 555 aa16.22■□□□□ 0.19
Sqle-202ENSMUST00000100640 Rusc2Q80U22 1514 aa16.22■□□□□ 0.19
Sqle-202ENSMUST00000100640 Mtus2Q3UHD3 1353 aa16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Nkx1-2P42580 305 aa16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Ipo4Q8VI75 1082 aa16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Magi3Q9EQJ9 1476 aa16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Rad21Q61550 635 aaKnown RBP16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Lamc1P02468 1607 aaKnown RBP16.21■□□□□ 0.19
Sqle-202ENSMUST00000100640 Pbrm1Q8BSQ9 1634 aaKnown RBP16.2■□□□□ 0.18
Sqle-202ENSMUST00000100640 Nup160Q9Z0W3 1402 aaKnown RBP16.2■□□□□ 0.18
Sqle-202ENSMUST00000100640 Grwd1Q810D6 446 aaKnown RBP16.19■□□□□ 0.18
Sqle-202ENSMUST00000100640 Grin2aP35436 1464 aa16.19■□□□□ 0.18
Sqle-202ENSMUST00000100640 B4galnt3Q6L8S8 986 aa16.18■□□□□ 0.18
Sqle-202ENSMUST00000100640 Sart3Q9JLI8 962 aaKnown RBP16.18■□□□□ 0.18
Sqle-202ENSMUST00000100640 Dhx57Q6P5D3 1388 aaKnown RBP16.18■□□□□ 0.18
Sqle-202ENSMUST00000100640 Kif14L0N7N1 1674 aaKnown RBP16.17■□□□□ 0.18
Sqle-202ENSMUST00000100640 Pla2r1Q62028 1487 aa16.16■□□□□ 0.18
Sqle-202ENSMUST00000100640 Trak1Q6PD31 939 aa16.15■□□□□ 0.18
Sqle-202ENSMUST00000100640 Arhgef40Q3UPH7 1517 aa16.15■□□□□ 0.18
Sqle-202ENSMUST00000100640 Il16O54824 1322 aa16.15■□□□□ 0.18
Sqle-202ENSMUST00000100640 SphkapQ6NSW3 1687 aa16.15■□□□□ 0.18
Sqle-202ENSMUST00000100640 Q7TT23 1179 aa16.15■□□□□ 0.18
Sqle-202ENSMUST00000100640 AlkP97793 1621 aa16.14■□□□□ 0.17
Sqle-202ENSMUST00000100640 Ttll5Q8CHB8 1328 aa16.14■□□□□ 0.17
Sqle-202ENSMUST00000100640 Map3k4O08648 1597 aa16.14■□□□□ 0.17
Sqle-202ENSMUST00000100640 Dnai1Q8C0M8 701 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 93.4 ms