RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Gcc2Q8CHG3 1679 aa16.12■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Ncoa3O09000 1398 aa16.12■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Mug1P28665 1476 aa16.11■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Rapgef6Q5NCJ1 1609 aa16.1■□□□□ 0.17
Ddx55-201ENSMUST00000071057 NclP09405 707 aaKnown RBP16.1■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Zfp777B9EKF4 885 aa16.09■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Ankrd36D3Z4K0 1415 aa16.08■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Dennd4bQ3U1Y4 1499 aa16.08■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Nop58Q6DFW4 536 aaKnown RBP16.07■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Cabp1Q9JLK7 227 aa16.07■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Rusc2Q80U22 1514 aa16.06■□□□□ 0.16
Ddx55-201ENSMUST00000071057 UacaQ8CGB3 1411 aa16.06■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Arhgap31A6X8Z5 1425 aa16.06■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Fkbp15Q6P9Q6 1216 aaKnown RBP16.04■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Arhgef40Q3UPH7 1517 aa16.03■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Cdk11bP24788 784 aaKnown RBP16.03■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Arhgef11Q68FM7 1552 aa16.02■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Mapk8ip2Q9ERE9 830 aa16.02■□□□□ 0.16
Ddx55-201ENSMUST00000071057 Abcc5Q9R1X5 1436 aa16.02■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Plekhh2Q8C115 1491 aa16■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Cdc42bpaQ3UU96 1719 aa15.99■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Kdm6bQ5NCY0 1641 aa15.99■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Zfp644E9QA22 1323 aa15.99■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Neo1P97798 1493 aa15.98■□□□□ 0.15
Ddx55-201ENSMUST00000071057 AknaQ80VW7 1404 aa15.98■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Mphosph9A6H5Y1 991 aa15.97■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Mtus2Q3UHD3 1353 aa15.97■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Adcy10Q8C0T9 1614 aa15.97■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Fam71e1A1L3C1 212 aa15.96■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Ccdc141E9Q8Q6 1531 aa15.96■□□□□ 0.15
Ddx55-201ENSMUST00000071057 Ncoa2Q61026 1462 aa15.95■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Magi1Q6RHR9 1471 aa15.95■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Kiaa1551Q5DTW7 1521 aa15.95■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Map3k4O08648 1597 aa15.95■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Mroh2aD3Z750 1679 aa15.94■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Prex2Q3LAC4 1598 aa15.94■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Rfx7F8VPJ6 1459 aa15.93■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Dnmt1P13864 1620 aaKnown RBP15.93■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Zcchc11B2RX14 1644 aaKnown RBP15.93■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Jph4Q80WT0 628 aa15.92■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Cul7Q8VE73 1689 aa15.92■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Dhx57Q6P5D3 1388 aaKnown RBP15.91■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Dnajc5P60904 198 aa15.91■□□□□ 0.14
Ddx55-201ENSMUST00000071057 SphkapQ6NSW3 1687 aa15.9■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Fhod3Q76LL6 1578 aa15.9■□□□□ 0.14
Ddx55-201ENSMUST00000071057 Fam163aQ8CAA5 168 aa15.89■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Tdrd9Q14BI7 1383 aa15.89■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Naip5Q9R016 1403 aa15.89■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Plcd4Q8K3R3 807 aa15.88■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Adgrb2Q8CGM1 1561 aa15.88■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Arhgef12Q8R4H2 1543 aaKnown RBP15.87■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Fgd6Q69ZL1 1399 aa15.87■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Pkd2O35245 966 aa15.87■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Ncbp3Q8BZR9 615 aaKnown RBP15.87■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Mapkbp1Q6NS57 1503 aa15.86■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Gm13697A2AK42 830 aa15.86■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Kdm3bQ6ZPY7 1562 aa15.85■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Sin3aQ60520 1274 aaKnown RBP15.85■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Q8BT18 775 aa15.85■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Il16O54824 1322 aa15.85■□□□□ 0.13
Ddx55-201ENSMUST00000071057 Usp47Q8BY87 1376 aa15.82■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Setbp1Q9Z180 1582 aa15.82■□□□□ 0.12
Ddx55-201ENSMUST00000071057 AlkP97793 1621 aa15.8■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Gtf3c3Q3TMP1 882 aa15.8■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Rrbp1Q99PL5 1605 aaKnown RBP15.79■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Mlh3A0A1Y7VMP7 1443 aa15.79■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Fancd2Q80V62 1450 aa15.78■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Gm14025A2AP89 1413 aa15.77■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Camsap2Q8C1B1 1461 aa15.77■□□□□ 0.12
Ddx55-201ENSMUST00000071057 Zbtb7cQ8VCZ7 619 aa15.77■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Col17a1Q07563 1470 aa15.77■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Rprd2Q6NXI6 1469 aaKnown RBP15.76■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Ttll5Q8CHB8 1328 aa15.75■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Trak1Q6PD31 939 aa15.75■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Caskin1Q6P9K8 1431 aa15.74■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Pabpn1Q8CCS6 302 aaKnown RBP15.74■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Ube2q2Q8K2Z8 378 aa15.74■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Dhx9O70133 1380 aaKnown RBP15.73■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Supt6hQ62383 1726 aaKnown RBP15.72■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Slc4a1apE9PX68 744 aa15.71■□□□□ 0.11
Ddx55-201ENSMUST00000071057 Fam208aQ69ZR9 1610 aaKnown RBP15.71■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Rgl3Q3UYI5 709 aa15.7■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Arhgap5P97393 1501 aa15.7■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Lamc1P02468 1607 aaKnown RBP15.7■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Abcc1O35379 1528 aa15.7■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Nup155Q99P88 1391 aaKnown RBP15.7■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Pik3c2gO70167 1506 aa15.69■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Rrp7aQ9D1C9 280 aaKnown RBP15.69■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Trappc8E9PWG2 1437 aa15.68■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Map4P27546 1125 aaKnown RBP15.68■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Kif21bQ9QXL1 1668 aa15.67■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Sart1Q9Z315 806 aaKnown RBP15.66■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Chd1P40201 1711 aa15.66■□□□□ 0.1
Ddx55-201ENSMUST00000071057 Kif14L0N7N1 1674 aaKnown RBP15.64■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Fmn2Q9JL04 1578 aa15.64■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Pprc1Q6NZN1 1644 aa15.63■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Rbm10Q99KG3 930 aaKnown RBP15.63■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Trpm2Q91YD4 1506 aa15.62■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Gm32742A0A1B0GT42 1604 aa15.61■□□□□ 0.09
Ddx55-201ENSMUST00000071057 NhsB1AV60 1647 aa15.61■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms