RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Gm1043A0A140LJC2 1431 aa13.82□□□□□ -0.2
Trim17-201ENSMUST00000047697 Ncoa2Q61026 1462 aa13.82□□□□□ -0.2
Trim17-201ENSMUST00000047697 Phldb1Q6PDH0 1371 aaKnown RBP13.81□□□□□ -0.2
Trim17-201ENSMUST00000047697 PnisrA2AJT4 805 aaKnown RBP13.8□□□□□ -0.2
Trim17-201ENSMUST00000047697 Fkbp15Q6P9Q6 1216 aaKnown RBP13.8□□□□□ -0.2
Trim17-201ENSMUST00000047697 Urb2E9Q7L1 1524 aaKnown RBP13.8□□□□□ -0.2
Trim17-201ENSMUST00000047697 Trak1Q6PD31 939 aa13.8□□□□□ -0.2
Trim17-201ENSMUST00000047697 Liat1Q810M6 228 aa13.79□□□□□ -0.2
Trim17-201ENSMUST00000047697 Upf2A2AT37 1269 aaKnown RBP13.79□□□□□ -0.2
Trim17-201ENSMUST00000047697 PogzQ8BZH4 1409 aaKnown RBP13.78□□□□□ -0.2
Trim17-201ENSMUST00000047697 Hsp90aa1P07901 733 aaKnown RBP13.78□□□□□ -0.2
Trim17-201ENSMUST00000047697 Ipo9Q91YE6 1041 aa13.78□□□□□ -0.2
Trim17-201ENSMUST00000047697 Lmo7E9PYF4 1699 aaKnown RBP13.78□□□□□ -0.2
Trim17-201ENSMUST00000047697 Camsap2Q8C1B1 1461 aa13.77□□□□□ -0.21
Trim17-201ENSMUST00000047697 Crocc2F6XLV1 1638 aa13.76□□□□□ -0.21
Trim17-201ENSMUST00000047697 Ncoa1P70365 1447 aa13.76□□□□□ -0.21
Trim17-201ENSMUST00000047697 Plekhh2Q8C115 1491 aa13.76□□□□□ -0.21
Trim17-201ENSMUST00000047697 Dapk1Q80YE7 1442 aa13.74□□□□□ -0.21
Trim17-201ENSMUST00000047697 ChgaP26339 463 aaKnown RBP13.74□□□□□ -0.21
Trim17-201ENSMUST00000047697 Ift140E9PY46 1464 aa13.74□□□□□ -0.21
Trim17-201ENSMUST00000047697 Arhgap27A2AB59 869 aa13.73□□□□□ -0.21
Trim17-201ENSMUST00000047697 L3mbtl2P59178 703 aa13.73□□□□□ -0.21
Trim17-201ENSMUST00000047697 Polr1aO35134 1717 aaKnown RBP13.73□□□□□ -0.21
Trim17-201ENSMUST00000047697 B4galnt3Q6L8S8 986 aa13.72□□□□□ -0.21
Trim17-201ENSMUST00000047697 CanxP35564 591 aaKnown RBP13.71□□□□□ -0.21
Trim17-201ENSMUST00000047697 SynmQ70IV5 1561 aa13.7□□□□□ -0.22
Trim17-201ENSMUST00000047697 Os9Q8K2C7 672 aa13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 Prdm10Q3UTQ7 1184 aa13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 Dbr1Q923B1 550 aa13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 Dhx9O70133 1380 aaKnown RBP13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 Hdac5Q9Z2V6 1113 aa13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 NexmifQ5DTT1 1515 aa13.69□□□□□ -0.22
Trim17-201ENSMUST00000047697 ArxO35085 564 aa13.68□□□□□ -0.22
Trim17-201ENSMUST00000047697 Zscan21Q07231 555 aa13.68□□□□□ -0.22
Trim17-201ENSMUST00000047697 Apbb1Q9QXJ1 710 aa13.68□□□□□ -0.22
Trim17-201ENSMUST00000047697 Egfem1Q8C088 590 aa13.68□□□□□ -0.22
Trim17-201ENSMUST00000047697 EprsQ8CGC7 1512 aaKnown RBP13.67□□□□□ -0.22
Trim17-201ENSMUST00000047697 Peg3Q3URU2 1571 aa13.67□□□□□ -0.22
Trim17-201ENSMUST00000047697 CadpsQ80TJ1 1355 aa13.67□□□□□ -0.22
Trim17-201ENSMUST00000047697 Rpgrip1lQ8CG73 1264 aa13.67□□□□□ -0.22
Trim17-201ENSMUST00000047697 Rprd2Q6NXI6 1469 aaKnown RBP13.66□□□□□ -0.22
Trim17-201ENSMUST00000047697 Map4P27546 1125 aaKnown RBP13.66□□□□□ -0.22
Trim17-201ENSMUST00000047697 WrnO09053 1401 aa13.66□□□□□ -0.22
Trim17-201ENSMUST00000047697 Erich6D3Z6S9 713 aa13.65□□□□□ -0.22
Trim17-201ENSMUST00000047697 Mak16Q8BGS0 296 aaKnown RBP13.65□□□□□ -0.22
Trim17-201ENSMUST00000047697 Mug1P28665 1476 aa13.65□□□□□ -0.23
Trim17-201ENSMUST00000047697 Ccdc9Q8VC31 543 aaKnown RBP13.65□□□□□ -0.23
Trim17-201ENSMUST00000047697 Abcc5Q9R1X5 1436 aa13.64□□□□□ -0.23
Trim17-201ENSMUST00000047697 Plekhg5Q66T02 1073 aa13.63□□□□□ -0.23
Trim17-201ENSMUST00000047697 Dennd4bQ3U1Y4 1499 aa13.63□□□□□ -0.23
Trim17-201ENSMUST00000047697 Samd9lQ69Z37 1561 aa13.62□□□□□ -0.23
Trim17-201ENSMUST00000047697 Irx3P81067 507 aa13.62□□□□□ -0.23
Trim17-201ENSMUST00000047697 Gpatch8A2A6A1 1505 aa13.62□□□□□ -0.23
Trim17-201ENSMUST00000047697 Q7TT23 1179 aa13.61□□□□□ -0.23
Trim17-201ENSMUST00000047697 Ttll5Q8CHB8 1328 aa13.61□□□□□ -0.23
Trim17-201ENSMUST00000047697 BC005561E9Q5E2 1589 aa13.61□□□□□ -0.23
Trim17-201ENSMUST00000047697 Nup155Q99P88 1391 aaKnown RBP13.61□□□□□ -0.23
Trim17-201ENSMUST00000047697 Thoc2B1AZI6 1594 aaKnown RBP13.6□□□□□ -0.23
Trim17-201ENSMUST00000047697 Zfp444Q3TDV8 331 aaKnown RBP13.6□□□□□ -0.23
Trim17-201ENSMUST00000047697 Nlrp6Q91WS2 869 aa13.59□□□□□ -0.23
Trim17-201ENSMUST00000047697 Rrp7aQ9D1C9 280 aaKnown RBP13.59□□□□□ -0.23
Trim17-201ENSMUST00000047697 Pprc1Q6NZN1 1644 aa13.59□□□□□ -0.23
Trim17-201ENSMUST00000047697 Unc13aQ4KUS2 1712 aa13.58□□□□□ -0.23
Trim17-201ENSMUST00000047697 CrbnQ8C7D2 445 aa13.58□□□□□ -0.24
Trim17-201ENSMUST00000047697 Gtf3c3Q3TMP1 882 aa13.57□□□□□ -0.24
Trim17-201ENSMUST00000047697 Neurod2Q62414 383 aa13.57□□□□□ -0.24
Trim17-201ENSMUST00000047697 Trim30dE9PWL0 497 aa13.57□□□□□ -0.24
Trim17-201ENSMUST00000047697 Rfx7F8VPJ6 1459 aa13.57□□□□□ -0.24
Trim17-201ENSMUST00000047697 Lmtk2Q3TYD6 1471 aa13.57□□□□□ -0.24
Trim17-201ENSMUST00000047697 Ifit1bl1D3Z6F0 470 aa13.56□□□□□ -0.24
Trim17-201ENSMUST00000047697 Kdm2aP59997 1161 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Tdrd9Q14BI7 1383 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Pank3Q8R2W9 370 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Chmp5Q9D7S9 219 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Polr3glQ8R0C0 218 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Iqcf3Q9D498 203 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Clstn2Q9ER65 966 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Cc2d2bA0A286YDU8 1405 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Pik3c2gO70167 1506 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Cul7Q8VE73 1689 aa13.55□□□□□ -0.24
Trim17-201ENSMUST00000047697 Esx1O88933 382 aa13.54□□□□□ -0.24
Trim17-201ENSMUST00000047697 Inpp5dQ9ES52 1191 aa13.54□□□□□ -0.24
Trim17-201ENSMUST00000047697 Ttll13A4Q9F6 804 aa13.54□□□□□ -0.24
Trim17-201ENSMUST00000047697 Prkrip1Q9CWV6 186 aaKnown RBP13.54□□□□□ -0.24
Trim17-201ENSMUST00000047697 Rock2P70336 1388 aa13.52□□□□□ -0.24
Trim17-201ENSMUST00000047697 Mroh3A0A1D5RM54 893 aa13.52□□□□□ -0.25
Trim17-201ENSMUST00000047697 4930567H17RikQ3V0K5 233 aa13.52□□□□□ -0.25
Trim17-201ENSMUST00000047697 Rwdd1Q9CQK7 243 aa13.52□□□□□ -0.25
Trim17-201ENSMUST00000047697 Sart3Q9JLI8 962 aaKnown RBP13.51□□□□□ -0.25
Trim17-201ENSMUST00000047697 Dnai1Q8C0M8 701 aa13.5□□□□□ -0.25
Trim17-201ENSMUST00000047697 Ncoa3O09000 1398 aa13.5□□□□□ -0.25
Trim17-201ENSMUST00000047697 Hsp90ab1P11499 724 aaKnown RBP13.49□□□□□ -0.25
Trim17-201ENSMUST00000047697 Dhx57Q6P5D3 1388 aaKnown RBP13.49□□□□□ -0.25
Trim17-201ENSMUST00000047697 Pla2r1Q62028 1487 aa13.49□□□□□ -0.25
Trim17-201ENSMUST00000047697 Erbb3Q61526 1339 aa13.49□□□□□ -0.25
Trim17-201ENSMUST00000047697 EspnQ9ET47 871 aa13.49□□□□□ -0.25
Trim17-201ENSMUST00000047697 Il16O54824 1322 aa13.48□□□□□ -0.25
Trim17-201ENSMUST00000047697 Arhgef40Q3UPH7 1517 aa13.48□□□□□ -0.25
Trim17-201ENSMUST00000047697 Speer4f1Q9D5Q6 258 aa13.48□□□□□ -0.25
Trim17-201ENSMUST00000047697 Plcd4Q8K3R3 807 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms