RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Dennd4bQ3U1Y4 1499 aa19.09■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 WrnO09053 1401 aa19.08■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Zcchc11B2RX14 1644 aaKnown RBP19.08■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Ncoa2Q61026 1462 aa19.08■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Arhgef11Q68FM7 1552 aa19.06■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Kiaa1210E9Q0C6 1637 aa19.06■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Nop58Q6DFW4 536 aaKnown RBP19.06■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Rrbp1Q99PL5 1605 aaKnown RBP19.06■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Neo1P97798 1493 aa19.05■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Cdk11bP24788 784 aaKnown RBP19.05■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 NexmifQ5DTT1 1515 aa19.04■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Arhgef12Q8R4H2 1543 aaKnown RBP19.04■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Abcc1O35379 1528 aa19.02■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Gm38655A0A286YDK6 273 aa19.02■□□□□ 0.64
Prpf38b-201ENSMUST00000029480 Kif27Q7M6Z4 1394 aa19.01■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Gtf3c5Q8R2T8 520 aa19.01■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Chd1P40201 1711 aa19.01■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Ap3b1Q9Z1T1 1105 aa19■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Dhx57Q6P5D3 1388 aaKnown RBP19■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Naip5Q9R016 1403 aa18.99■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 AknaQ80VW7 1404 aa18.98■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Mapkbp1Q6NS57 1503 aa18.98■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Hdac5Q9Z2V6 1113 aa18.97■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Wdr7Q920I9 1489 aa18.97■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Gm14025A2AP89 1413 aa18.96■□□□□ 0.63
Prpf38b-201ENSMUST00000029480 Il16O54824 1322 aa18.95■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Gm13697A2AK42 830 aa18.95■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Caskin1Q6P9K8 1431 aa18.95■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Ccdc141E9Q8Q6 1531 aa18.94■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Jph4Q80WT0 628 aa18.94■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Mast1Q9R1L5 1570 aa18.94■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Mug1P28665 1476 aa18.93■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Kdm3bQ6ZPY7 1562 aa18.93■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Ccnb3Q810T2 1396 aa18.92■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Arhgap31A6X8Z5 1425 aa18.92■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Hecw1Q8K4P8 1604 aa18.91■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Trpm2Q91YD4 1506 aa18.91■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Mlh3A0A1Y7VMP7 1443 aa18.91■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Mroh2aD3Z750 1679 aa18.9■□□□□ 0.62
Prpf38b-201ENSMUST00000029480 Pabpn1Q8CCS6 302 aaKnown RBP18.87■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Pdcd11Q6NS46 1862 aaKnown RBP18.87■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 BccipQ9CWI3 316 aa18.87■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Fmn2Q9JL04 1578 aa18.87■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Pik3c2gO70167 1506 aa18.86■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Rprd2Q6NXI6 1469 aaKnown RBP18.86■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Adcy10Q8C0T9 1614 aa18.86■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Ncoa3O09000 1398 aa18.85■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Fam208aQ69ZR9 1610 aaKnown RBP18.85■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Prex2Q3LAC4 1598 aa18.85■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Plekhh2Q8C115 1491 aa18.85■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Magi1Q6RHR9 1471 aa18.84■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Eid3Q3V124 375 aa18.84■□□□□ 0.61
Prpf38b-201ENSMUST00000029480 Gapvd1Q6PAR5 1458 aa18.83■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Rnf17Q99MV7 1640 aa18.82■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 NhsB1AV60 1647 aa18.82■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Fam71e1A1L3C1 212 aa18.82■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Adgrl2Q8JZZ7 1487 aa18.81■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Tnnt3Q9QZ47 272 aa18.81■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Mbd5B1AYB6 1498 aa18.81■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Stra8P70278 393 aa18.81■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Fam163aQ8CAA5 168 aa18.8■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Fancd2Q80V62 1450 aa18.8■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Cep170Q6A065 1588 aa18.79■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Ythdc2B2RR83 1445 aaKnown RBP18.79■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Cfap74Q3UY96 1578 aa18.79■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 Abcc5Q9R1X5 1436 aa18.78■□□□□ 0.6
Prpf38b-201ENSMUST00000029480 PtprtQ99M80 1454 aa18.76■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Lmod2Q3UHZ5 550 aa18.76■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 SphkapQ6NSW3 1687 aa18.75■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Zmym4A2A791 1549 aaKnown RBP18.72■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 AlkP97793 1621 aa18.72■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Igf1rQ60751 1373 aa18.72■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 AI481877A2ALV5 1481 aa18.72■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Pelp1Q9DBD5 1123 aaKnown RBP18.71■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Ube2uB1AUC4 352 aa18.71■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Setd1aE9PYH6 1716 aa18.71■□□□□ 0.59
Prpf38b-201ENSMUST00000029480 Gm32742A0A1B0GT42 1604 aa18.69■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Kdm6bQ5NCY0 1641 aa18.69■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Ncoa1P70365 1447 aa18.68■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Abca8bQ8K440 1620 aa18.67■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Iqgap1Q9JKF1 1657 aaKnown RBP18.67■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Col17a1Q07563 1470 aa18.67■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 Ppip5k1A2ARP1 1436 aa18.65■□□□□ 0.58
Prpf38b-201ENSMUST00000029480 PtprgQ05909 1442 aa18.63■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Lrrc9Q8CDN9 1456 aa18.62■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Cpsf1Q9EPU4 1441 aaKnown RBP18.61■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Adgrl3Q80TS3 1537 aa18.61■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Mapk8ip2Q9ERE9 830 aa18.6■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Atp10dQ8K2X1 1416 aa18.6■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Rock1P70335 1354 aa18.59■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Mtus2Q3UHD3 1353 aa18.59■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 TimelessQ9R1X4 1197 aa18.58■□□□□ 0.57
Prpf38b-201ENSMUST00000029480 Abca17E9PX95 1733 aa18.57■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Smg6P61406 1418 aaKnown RBP18.57■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Kif14L0N7N1 1674 aaKnown RBP18.57■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Abcc3B2RX12 1523 aa18.56■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Fkbp15Q6P9Q6 1216 aaKnown RBP18.56■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 NclP09405 707 aaKnown RBP18.55■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Gm156Q58A37 223 aa18.55■□□□□ 0.56
Prpf38b-201ENSMUST00000029480 Supt6hQ62383 1726 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms