RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Polr1aO35134 1717 aaKnown RBP26,39■■□□□ 1,82
Tram1-201ENSMUST00000027068 Kif27Q7M6Z4 1394 aa26,39■■□□□ 1,82
Tram1-201ENSMUST00000027068 Lmtk2Q3TYD6 1471 aa26,36■■□□□ 1,81
Tram1-201ENSMUST00000027068 Liat1Q810M6 228 aa26,35■■□□□ 1,81
Tram1-201ENSMUST00000027068 Gpatch8A2A6A1 1505 aa26,34■■□□□ 1,81
Tram1-201ENSMUST00000027068 NexmifQ5DTT1 1515 aa26,32■■□□□ 1,8
Tram1-201ENSMUST00000027068 Fhod3Q76LL6 1578 aa26,31■■□□□ 1,8
Tram1-201ENSMUST00000027068 EprsQ8CGC7 1512 aaKnown RBP26,31■■□□□ 1,8
Tram1-201ENSMUST00000027068 Mug1P28665 1476 aa26,3■■□□□ 1,8
Tram1-201ENSMUST00000027068 PnisrA2AJT4 805 aaKnown RBP26,28■■□□□ 1,8
Tram1-201ENSMUST00000027068 BC005561E9Q5E2 1589 aa26,27■■□□□ 1,8
Tram1-201ENSMUST00000027068 CadpsQ80TJ1 1355 aa26,27■■□□□ 1,8
Tram1-201ENSMUST00000027068 Ift140E9PY46 1464 aa26,24■■□□□ 1,79
Tram1-201ENSMUST00000027068 Rprd2Q6NXI6 1469 aaKnown RBP26,24■■□□□ 1,79
Tram1-201ENSMUST00000027068 Kcnh8P59111 1102 aa26,23■■□□□ 1,79
Tram1-201ENSMUST00000027068 Rgl3Q3UYI5 709 aa26,22■■□□□ 1,79
Tram1-201ENSMUST00000027068 Ofd1Q80Z25 1017 aa26,21■■□□□ 1,79
Tram1-201ENSMUST00000027068 Setbp1Q9Z180 1582 aa26,21■■□□□ 1,79
Tram1-201ENSMUST00000027068 Egfem1Q8C088 590 aa26,21■■□□□ 1,79
Tram1-201ENSMUST00000027068 Abcc5Q9R1X5 1436 aa26,18■■□□□ 1,78
Tram1-201ENSMUST00000027068 Pla2r1Q62028 1487 aa26,18■■□□□ 1,78
Tram1-201ENSMUST00000027068 Gcc2Q8CHG3 1679 aa26,16■■□□□ 1,78
Tram1-201ENSMUST00000027068 Rfx7F8VPJ6 1459 aa26,14■■□□□ 1,78
Tram1-201ENSMUST00000027068 L3mbtl2P59178 703 aa26,12■■□□□ 1,77
Tram1-201ENSMUST00000027068 Rundc1Q0VDN7 615 aa26,11■■□□□ 1,77
Tram1-201ENSMUST00000027068 Abca5Q8K448 1642 aa26,11■■□□□ 1,77
Tram1-201ENSMUST00000027068 Plekhh2Q8C115 1491 aa26,11■■□□□ 1,77
Tram1-201ENSMUST00000027068 Dhx9O70133 1380 aaKnown RBP26,1■■□□□ 1,77
Tram1-201ENSMUST00000027068 Arhgef40Q3UPH7 1517 aa26,08■■□□□ 1,76
Tram1-201ENSMUST00000027068 Dapk1Q80YE7 1442 aa26,06■■□□□ 1,76
Tram1-201ENSMUST00000027068 Mtus2Q3UHD3 1353 aa26,05■■□□□ 1,76
Tram1-201ENSMUST00000027068 Arhgap27A2AB59 869 aa26,05■■□□□ 1,76
Tram1-201ENSMUST00000027068 Grwd1Q810D6 446 aaKnown RBP26,05■■□□□ 1,76
Tram1-201ENSMUST00000027068 Fgd1P52734 960 aa26,05■■□□□ 1,76
Tram1-201ENSMUST00000027068 Pknox2Q8BG99 474 aa26,05■■□□□ 1,76
Tram1-201ENSMUST00000027068 Pik3c2gO70167 1506 aa26,04■■□□□ 1,76
Tram1-201ENSMUST00000027068 Disp1Q3TDN0 1521 aa26,04■■□□□ 1,76
Tram1-201ENSMUST00000027068 Ncoa3O09000 1398 aa26,04■■□□□ 1,76
Tram1-201ENSMUST00000027068 Cwc22Q8C5N3 908 aaKnown RBP26,03■■□□□ 1,76
Tram1-201ENSMUST00000027068 WizO88286 1684 aaKnown RBP26,03■■□□□ 1,76
Tram1-201ENSMUST00000027068 Kdm6bQ5NCY0 1641 aa26,03■■□□□ 1,76
Tram1-201ENSMUST00000027068 Card11Q8CIS0 1159 aa26,02■■□□□ 1,76
Tram1-201ENSMUST00000027068 Plcd4Q8K3R3 807 aa26,02■■□□□ 1,76
Tram1-201ENSMUST00000027068 Magi3Q9EQJ9 1476 aa26,02■■□□□ 1,76
Tram1-201ENSMUST00000027068 Plekhg5Q66T02 1073 aa26,01■■□□□ 1,76
Tram1-201ENSMUST00000027068 SphkapQ6NSW3 1687 aa26■■□□□ 1,75
Tram1-201ENSMUST00000027068 WrnO09053 1401 aa26■■□□□ 1,75
Tram1-201ENSMUST00000027068 Trak1Q6PD31 939 aa26■■□□□ 1,75
Tram1-201ENSMUST00000027068 Zbtb4Q5F293 982 aa25,98■■□□□ 1,75
Tram1-201ENSMUST00000027068 Adgrb2Q8CGM1 1561 aa25,97■■□□□ 1,75
Tram1-201ENSMUST00000027068 Grin2aP35436 1464 aa25,96■■□□□ 1,75
Tram1-201ENSMUST00000027068 Ttll5Q8CHB8 1328 aa25,96■■□□□ 1,75
Tram1-201ENSMUST00000027068 Kif21aQ9QXL2 1672 aa25,95■■□□□ 1,74
Tram1-201ENSMUST00000027068 PxdnQ3UQ28 1475 aa25,95■■□□□ 1,74
Tram1-201ENSMUST00000027068 Dhx57Q6P5D3 1388 aaKnown RBP25,94■■□□□ 1,74
Tram1-201ENSMUST00000027068 Gtf3c3Q3TMP1 882 aa25,94■■□□□ 1,74
Tram1-201ENSMUST00000027068 Tcerg1Q8CGF7 1100 aaKnown RBP25,94■■□□□ 1,74
Tram1-201ENSMUST00000027068 Kif14L0N7N1 1674 aaKnown RBP25,93■■□□□ 1,74
Tram1-201ENSMUST00000027068 Soga1E1U8D0 1418 aa25,92■■□□□ 1,74
Tram1-201ENSMUST00000027068 AlkP97793 1621 aa25,91■■□□□ 1,74
Tram1-201ENSMUST00000027068 Ccdc27Q3V036 639 aa25,91■■□□□ 1,74
Tram1-201ENSMUST00000027068 Ipo9Q91YE6 1041 aa25,91■■□□□ 1,74
Tram1-201ENSMUST00000027068 Myom3A2ABU4 1439 aa25,9■■□□□ 1,74
Tram1-201ENSMUST00000027068 Mug2P28666 1451 aa25,9■■□□□ 1,74
Tram1-201ENSMUST00000027068 Fam135aQ6NS59 1506 aa25,88■■□□□ 1,73
Tram1-201ENSMUST00000027068 Zbtb7cQ8VCZ7 619 aa25,87■■□□□ 1,73
Tram1-201ENSMUST00000027068 Kdm3bQ6ZPY7 1562 aa25,87■■□□□ 1,73
Tram1-201ENSMUST00000027068 Erbb3Q61526 1339 aa25,86■■□□□ 1,73
Tram1-201ENSMUST00000027068 Rpgrip1lQ8CG73 1264 aa25,85■■□□□ 1,73
Tram1-201ENSMUST00000027068 Il16O54824 1322 aa25,84■■□□□ 1,73
Tram1-201ENSMUST00000027068 Adamts12Q811B3 1600 aa25,84■■□□□ 1,73
Tram1-201ENSMUST00000027068 Naip6Q9JIB6 1403 aa25,84■■□□□ 1,73
Tram1-201ENSMUST00000027068 Upf2A2AT37 1269 aaKnown RBP25,84■■□□□ 1,73
Tram1-201ENSMUST00000027068 Mbd5B1AYB6 1498 aa25,83■■□□□ 1,73
Tram1-201ENSMUST00000027068 Adcy10Q8C0T9 1614 aa25,83■■□□□ 1,73
Tram1-201ENSMUST00000027068 Rad21Q61550 635 aaKnown RBP25,83■■□□□ 1,73
Tram1-201ENSMUST00000027068 Plb1Q3TTY0 1478 aa25,83■■□□□ 1,72
Tram1-201ENSMUST00000027068 Lamc1P02468 1607 aaKnown RBP25,82■■□□□ 1,72
Tram1-201ENSMUST00000027068 Cdk13Q69ZA1 1511 aaKnown RBP25,81■■□□□ 1,72
Tram1-201ENSMUST00000027068 Supt6hQ62383 1726 aaKnown RBP25,8■■□□□ 1,72
Tram1-201ENSMUST00000027068 Cc2d2bA0A286YDU8 1405 aa25,78■■□□□ 1,72
Tram1-201ENSMUST00000027068 Zfp444Q3TDV8 331 aaKnown RBP25,77■■□□□ 1,72
Tram1-201ENSMUST00000027068 Q7TT23 1179 aa25,77■■□□□ 1,72
Tram1-201ENSMUST00000027068 Rapgef6Q5NCJ1 1609 aa25,76■■□□□ 1,71
Tram1-201ENSMUST00000027068 Wdr7Q920I9 1489 aa25,76■■□□□ 1,71
Tram1-201ENSMUST00000027068 Arhgef12Q8R4H2 1543 aaKnown RBP25,75■■□□□ 1,71
Tram1-201ENSMUST00000027068 ChgaP26339 463 aaKnown RBP25,75■■□□□ 1,71
Tram1-201ENSMUST00000027068 Nup155Q99P88 1391 aaKnown RBP25,75■■□□□ 1,71
Tram1-201ENSMUST00000027068 Map3k4O08648 1597 aa25,74■■□□□ 1,71
Tram1-201ENSMUST00000027068 Kif21bQ9QXL1 1668 aa25,73■■□□□ 1,71
Tram1-201ENSMUST00000027068 Kank1E9Q238 1360 aa25,71■■□□□ 1,71
Tram1-201ENSMUST00000027068 Tdrd9Q14BI7 1383 aa25,71■■□□□ 1,71
Tram1-201ENSMUST00000027068 Map4P27546 1125 aaKnown RBP25,71■■□□□ 1,71
Tram1-201ENSMUST00000027068 NeflP08551 543 aa25,7■■□□□ 1,71
Tram1-201ENSMUST00000027068 Zscan21Q07231 555 aa25,69■■□□□ 1,7
Tram1-201ENSMUST00000027068 Arhgef11Q68FM7 1552 aa25,68■■□□□ 1,7
Tram1-201ENSMUST00000027068 Abca16E9PWJ7 1678 aa25,68■■□□□ 1,7
Tram1-201ENSMUST00000027068 Cdc42bpaQ3UU96 1719 aa25,67■■□□□ 1,7
Tram1-201ENSMUST00000027068 Fkbp15Q6P9Q6 1216 aaKnown RBP25,67■■□□□ 1,7
Tram1-201ENSMUST00000027068 Mak16Q8BGS0 296 aaKnown RBP25,66■■□□□ 1,7
Retrieved 100 of 22,080 RNA–protein pairs in 26,5 ms