RNA–Protein interactions for RNA: ENSMUST00000025263.14

Tnf-201, Transcript of Tumor necrosis factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnf, Length 1,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnf-201ENSMUST00000025263 Gm45233A0A0N4SVE0 221 aa15.39■□□□□ 0.05
Tnf-201ENSMUST00000025263 Prim1P20664 417 aa15.39■□□□□ 0.05
Tnf-201ENSMUST00000025263 Shroom2A2ALU4 1481 aa15.38■□□□□ 0.05
Tnf-201ENSMUST00000025263 Duox2A2AQ99 1517 aa15.38■□□□□ 0.05
Tnf-201ENSMUST00000025263 Ift140E9PY46 1464 aa15.36■□□□□ 0.05
Tnf-201ENSMUST00000025263 Ccdc88bQ4QRL3 1481 aa15.35■□□□□ 0.05
Tnf-201ENSMUST00000025263 Grin2bQ01097 1482 aa15.33■□□□□ 0.04
Tnf-201ENSMUST00000025263 Rusc2Q80U22 1514 aa15.32■□□□□ 0.04
Tnf-201ENSMUST00000025263 E9Q0B3 247 aa15.32■□□□□ 0.04
Tnf-201ENSMUST00000025263 Pabpn1Q8CCS6 302 aaKnown RBP15.3■□□□□ 0.04
Tnf-201ENSMUST00000025263 Pelp1Q9DBD5 1123 aaKnown RBP15.3■□□□□ 0.04
Tnf-201ENSMUST00000025263 Top2aQ01320 1528 aaKnown RBP15.29■□□□□ 0.04
Tnf-201ENSMUST00000025263 Disp1Q3TDN0 1521 aa15.28■□□□□ 0.04
Tnf-201ENSMUST00000025263 Kank4Q6P9J5 1016 aa15.27■□□□□ 0.03
Tnf-201ENSMUST00000025263 Samd9lQ69Z37 1561 aa15.26■□□□□ 0.03
Tnf-201ENSMUST00000025263 OsbpQ3B7Z2 805 aa15.23■□□□□ 0.03
Tnf-201ENSMUST00000025263 Erich4Q3UNU4 136 aa15.22■□□□□ 0.03
Tnf-201ENSMUST00000025263 Nap1l5Q9JJF0 156 aa15.21■□□□□ 0.03
Tnf-201ENSMUST00000025263 Col17a1Q07563 1470 aa15.21■□□□□ 0.03
Tnf-201ENSMUST00000025263 Efcab5A0JP43 1406 aa15.21■□□□□ 0.02
Tnf-201ENSMUST00000025263 Rad54l2Q99NG0 1466 aa15.2■□□□□ 0.02
Tnf-201ENSMUST00000025263 Nup160Q9Z0W3 1402 aaKnown RBP15.18■□□□□ 0.02
Tnf-201ENSMUST00000025263 ChgaP26339 463 aaKnown RBP15.17■□□□□ 0.02
Tnf-201ENSMUST00000025263 TMEM121BQ99MX7 572 aa15.17■□□□□ 0.02
Tnf-201ENSMUST00000025263 Evi5P97366 809 aa15.17■□□□□ 0.02
Tnf-201ENSMUST00000025263 Jph4Q80WT0 628 aa15.17■□□□□ 0.02
Tnf-201ENSMUST00000025263 Cnksr2Q80YA9 1032 aa15.17■□□□□ 0.02
Tnf-201ENSMUST00000025263 Cc2d2bA0A286YDU8 1405 aa15.16■□□□□ 0.02
Tnf-201ENSMUST00000025263 Pdzrn4E9PUZ9 1014 aa15.14■□□□□ 0.01
Tnf-201ENSMUST00000025263 Spryd3E9Q9B3 442 aa15.14■□□□□ 0.01
Tnf-201ENSMUST00000025263 Pak3Q61036 559 aa15.14■□□□□ 0.01
Tnf-201ENSMUST00000025263 1700006A11RikB9EHI3 544 aa15.14■□□□□ 0.01
Tnf-201ENSMUST00000025263 Setd1bQ8CFT2 1985 aa15.13■□□□□ 0.01
Tnf-201ENSMUST00000025263 NrkQ9R0G8 1455 aa15.12■□□□□ 0.01
Tnf-201ENSMUST00000025263 Pbrm1Q8BSQ9 1634 aaKnown RBP15.11■□□□□ 0.01
Tnf-201ENSMUST00000025263 Grin2aP35436 1464 aa15.11■□□□□ 0.01
Tnf-201ENSMUST00000025263 PtprkP35822 1457 aa15.11■□□□□ 0.01
Tnf-201ENSMUST00000025263 Magi3Q9EQJ9 1476 aa15.1■□□□□ 0.01
Tnf-201ENSMUST00000025263 Tox2A2A472 547 aa15.1■□□□□ 0.01
Tnf-201ENSMUST00000025263 Shroom4Q1W617 1475 aa15.07■□□□□ 0
Tnf-201ENSMUST00000025263 Rapgef2Q8CHG7 1496 aa15.07■□□□□ 0
Tnf-201ENSMUST00000025263 C1qbpO35658 278 aa15.06■□□□□ 0
Tnf-201ENSMUST00000025263 AqrQ8CFQ3 1481 aaKnown RBP15.06■□□□□ 0
Tnf-201ENSMUST00000025263 Fkbp4P30416 458 aa15.05■□□□□ -0
Tnf-201ENSMUST00000025263 Fgd6Q69ZL1 1399 aa15.03■□□□□ -0
Tnf-201ENSMUST00000025263 Actn4P57780 912 aaKnown RBP15.02□□□□□ -0.01
Tnf-201ENSMUST00000025263 Pla2r1Q62028 1487 aa15.02□□□□□ -0.01
Tnf-201ENSMUST00000025263 Ric3Q8BPM6 367 aa15□□□□□ -0.01
Tnf-201ENSMUST00000025263 SynmQ70IV5 1561 aa15□□□□□ -0.01
Tnf-201ENSMUST00000025263 Dmrta2A2A9A2 531 aa14.99□□□□□ -0.01
Tnf-201ENSMUST00000025263 Zcchc11B2RX14 1644 aaKnown RBP14.99□□□□□ -0.01
Tnf-201ENSMUST00000025263 AknaQ80VW7 1404 aa14.99□□□□□ -0.01
Tnf-201ENSMUST00000025263 Speer2E9Q9U2 264 aa14.97□□□□□ -0.01
Tnf-201ENSMUST00000025263 Ubap1lG3UW59 384 aa14.97□□□□□ -0.01
Tnf-201ENSMUST00000025263 Gpr37l1Q99JG2 481 aa14.95□□□□□ -0.02
Tnf-201ENSMUST00000025263 Gapvd1Q6PAR5 1458 aa14.94□□□□□ -0.02
Tnf-201ENSMUST00000025263 Slc7a3P70423 618 aa14.94□□□□□ -0.02
Tnf-201ENSMUST00000025263 Adgrl3Q80TS3 1537 aa14.94□□□□□ -0.02
Tnf-201ENSMUST00000025263 Cep162Q6ZQ06 1403 aa14.93□□□□□ -0.02
Tnf-201ENSMUST00000025263 Rpgrip1Q9EPQ2 1331 aa14.92□□□□□ -0.02
Tnf-201ENSMUST00000025263 Map3k1P53349 1493 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 Cep170Q6A065 1588 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 Ttbk1Q6PCN3 1308 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 Arhgap27A2AB59 869 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 Ankrd65F6YK91 380 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 Scnn1bQ9WU38 638 aa14.91□□□□□ -0.02
Tnf-201ENSMUST00000025263 VaspP70460 375 aaKnown RBP14.9□□□□□ -0.02
Tnf-201ENSMUST00000025263 Gm156Q58A37 223 aa14.9□□□□□ -0.02
Tnf-201ENSMUST00000025263 Abcc1O35379 1528 aa14.9□□□□□ -0.02
Tnf-201ENSMUST00000025263 Eif4g1Q6NZJ6 1600 aaKnown RBP14.89□□□□□ -0.03
Tnf-201ENSMUST00000025263 Gpatch8A2A6A1 1505 aa14.88□□□□□ -0.03
Tnf-201ENSMUST00000025263 Otop3Q80UF9 577 aa14.88□□□□□ -0.03
Tnf-201ENSMUST00000025263 Mroh2bQ7M6Y6 1581 aa14.86□□□□□ -0.03
Tnf-201ENSMUST00000025263 Pcdhb20Q91XZ9 799 aa14.86□□□□□ -0.03
Tnf-201ENSMUST00000025263 PxdnQ3UQ28 1475 aa14.86□□□□□ -0.03
Tnf-201ENSMUST00000025263 IncenpQ9WU62 880 aa14.85□□□□□ -0.03
Tnf-201ENSMUST00000025263 CadpsQ80TJ1 1355 aa14.85□□□□□ -0.03
Tnf-201ENSMUST00000025263 Ythdc2B2RR83 1445 aaKnown RBP14.85□□□□□ -0.03
Tnf-201ENSMUST00000025263 WizO88286 1684 aaKnown RBP14.84□□□□□ -0.03
Tnf-201ENSMUST00000025263 Neo1P97798 1493 aa14.84□□□□□ -0.03
Tnf-201ENSMUST00000025263 EprsQ8CGC7 1512 aaKnown RBP14.84□□□□□ -0.03
Tnf-201ENSMUST00000025263 Abcc2Q8VI47 1543 aa14.83□□□□□ -0.04
Tnf-201ENSMUST00000025263 TchhA0A0B4J1F9 1599 aa14.83□□□□□ -0.04
Tnf-201ENSMUST00000025263 Abca16E9PWJ7 1678 aa14.83□□□□□ -0.04
Tnf-201ENSMUST00000025263 Soga1E1U8D0 1418 aa14.83□□□□□ -0.04
Tnf-201ENSMUST00000025263 Arhgef5E9Q7D5 1581 aa14.82□□□□□ -0.04
Tnf-201ENSMUST00000025263 Pcdh10E9PXQ7 1057 aa14.82□□□□□ -0.04
Tnf-201ENSMUST00000025263 PtprtQ99M80 1454 aa14.82□□□□□ -0.04
Tnf-201ENSMUST00000025263 Dnmt1P13864 1620 aaKnown RBP14.82□□□□□ -0.04
Tnf-201ENSMUST00000025263 Ddx11Q6AXC6 880 aa14.81□□□□□ -0.04
Tnf-201ENSMUST00000025263 Arhgap35Q91YM2 1499 aa14.8□□□□□ -0.04
Tnf-201ENSMUST00000025263 BC005561E9Q5E2 1589 aa14.79□□□□□ -0.04
Tnf-201ENSMUST00000025263 Chd1P40201 1711 aa14.79□□□□□ -0.04
Tnf-201ENSMUST00000025263 Adamts12Q811B3 1600 aa14.79□□□□□ -0.04
Tnf-201ENSMUST00000025263 Map3k4O08648 1597 aa14.78□□□□□ -0.04
Tnf-201ENSMUST00000025263 Rpap1Q80TE0 1409 aa14.77□□□□□ -0.04
Tnf-201ENSMUST00000025263 ZxdbA2CE44 873 aa14.77□□□□□ -0.05
Tnf-201ENSMUST00000025263 Gm14025A2AP89 1413 aa14.76□□□□□ -0.05
Tnf-201ENSMUST00000025263 Carmil1Q6EDY6 1374 aa14.76□□□□□ -0.05
Tnf-201ENSMUST00000025263 Zbtb38Q3LR78 1197 aa14.75□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms