RNA–Protein interactions for RNA: ENSMUST00000023452.13

Ccdc116-201, Transcript of Coiled-coil domain-containing protein 116, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc116, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116-201ENSMUST00000023452 Lamc3Q9R0B6 1581 aa12.13□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Cwc22Q8C5N3 908 aaKnown RBP12.13□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Plekhh2Q8C115 1491 aa12.13□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Tdrd9Q14BI7 1383 aa12.12□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Slx4Q6P1D7 1565 aa12.1□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Nup155Q99P88 1391 aaKnown RBP12.1□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 3425401B19RikD3Z1D3 1412 aa12.09□□□□□ -0.47
Ccdc116-201ENSMUST00000023452 Gm20521D3Z5F7 333 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 DaxxO35613 739 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Gm7298A0A0N4SVU1 1476 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 UacaQ8CGB3 1411 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Dbr1Q923B1 550 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Sart1Q9Z315 806 aaKnown RBP12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Vps8Q0P5W1 1427 aa12.08□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Urb2E9Q7L1 1524 aaKnown RBP12.07□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Ankrd26Q811D2 1581 aa12.07□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 CadpsQ80TJ1 1355 aa12.07□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Gm13695A2AK44 830 aa12.06□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Cc2d2bA0A286YDU8 1405 aa12.06□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Supt16hQ920B9 1047 aa12.05□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 EprsQ8CGC7 1512 aaKnown RBP12.05□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 B4galnt3Q6L8S8 986 aa12.05□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Dhx9O70133 1380 aaKnown RBP12.05□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Slc4a2P13808 1237 aaKnown RBP12.04□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Plb1Q3TTY0 1478 aa12.04□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 A2mQ6GQT1 1474 aa12.04□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Ankrd36D3Z4K0 1415 aa12.03□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Rtl5Q5DTT4 599 aa12.03□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Srpk2O54781 681 aaKnown RBP12.03□□□□□ -0.48
Ccdc116-201ENSMUST00000023452 Naip2Q9QUK4 1447 aa12.02□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Dapk1Q80YE7 1442 aa12.01□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Ttll5Q8CHB8 1328 aa12.01□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Jph4Q80WT0 628 aa12□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Ift140E9PY46 1464 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 TnnQ80Z71 1560 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Kif3bQ61771 747 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 CrbnQ8C7D2 445 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Armcx1Q9CX83 456 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Inpp5dQ9ES52 1191 aa11.99□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Slc4a1apE9PX68 744 aa11.98□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Arhgap31A6X8Z5 1425 aa11.98□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Pank3Q8R2W9 370 aa11.98□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Zscan21Q07231 555 aa11.97□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 SynmQ70IV5 1561 aa11.97□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 TchhA0A0B4J1F9 1599 aa11.96□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Kcnh8P59111 1102 aa11.96□□□□□ -0.49
Ccdc116-201ENSMUST00000023452 Upf2A2AT37 1269 aaKnown RBP11.96□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 NexmifQ5DTT1 1515 aa11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Gm1043A0A140LJC2 1431 aa11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 DiexfQ8BTT6 772 aaKnown RBP11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Rpgrip1lQ8CG73 1264 aa11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Polr1aO35134 1717 aaKnown RBP11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Stk26Q99JT2 416 aa11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Senp3Q9EP97 568 aaKnown RBP11.95□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Q7TT23 1179 aa11.94□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Stag3O70576 1240 aa11.94□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Fan1Q69ZT1 1020 aa11.94□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Dcaf11Q91VU6 549 aa11.94□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Mrc2Q64449 1479 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Srcin1Q9QWI6 1250 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Hdac5Q9Z2V6 1113 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Trim30dE9PWL0 497 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Esx1O88933 382 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Speer4f1Q9D5Q6 258 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Rock2P70336 1388 aa11.93□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 CanxP35564 591 aaKnown RBP11.92□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Mak16Q8BGS0 296 aaKnown RBP11.92□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Abcc5Q9R1X5 1436 aa11.92□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Dhx57Q6P5D3 1388 aaKnown RBP11.92□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Gpatch8A2A6A1 1505 aa11.91□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 4930567H17RikQ3V0K5 233 aa11.91□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Map3k5O35099 1380 aa11.91□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Exosc9Q9JHI7 438 aaKnown RBP11.91□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Samd9lQ69Z37 1561 aa11.9□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Crocc2F6XLV1 1638 aa11.9□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Grin2aP35436 1464 aa11.9□□□□□ -0.5
Ccdc116-201ENSMUST00000023452 Gtf2e1Q9D0D5 440 aa11.9□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Tmf1B9EKI3 1091 aa11.89□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Mug1P28665 1476 aa11.89□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Spag9Q58A65 1321 aaKnown RBP11.89□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Eif4g1Q6NZJ6 1600 aaKnown RBP11.89□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Naip5Q9R016 1403 aa11.89□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Pak3Q61036 559 aa11.88□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Lemd3Q9WU40 921 aa11.88□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Arid4bA2CG63 1314 aaKnown RBP11.88□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Ncoa2Q61026 1462 aa11.88□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Tcerg1Q8CGF7 1100 aaKnown RBP11.87□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Thoc2B1AZI6 1594 aaKnown RBP11.87□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 PnisrA2AJT4 805 aaKnown RBP11.87□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Ncoa3O09000 1398 aa11.86□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 IqubQ8CDK3 788 aa11.86□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Plin1Q8CGN5 517 aa11.86□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 ChgaP26339 463 aaKnown RBP11.86□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 BC005561E9Q5E2 1589 aa11.86□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Soga1E1U8D0 1418 aa11.85□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Pde4cQ3UEI1 686 aa11.85□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 PxdnQ3UQ28 1475 aa11.85□□□□□ -0.51
Ccdc116-201ENSMUST00000023452 Rwdd1Q9CQK7 243 aa11.83□□□□□ -0.52
Ccdc116-201ENSMUST00000023452 Znf316Q6PGE4 1016 aa11.83□□□□□ -0.52
Ccdc116-201ENSMUST00000023452 NgefQ8CHT1 710 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms