RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Setbp1Q9Z180 1582 aa23.88■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Iqcf3Q9D498 203 aa23.88■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Ccnb3Q810T2 1396 aa23.88■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Plcd4Q8K3R3 807 aa23.86■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Usp47Q8BY87 1376 aa23.86■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Fgd1P52734 960 aa23.85■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Disp1Q3TDN0 1521 aa23.85■■□□□ 1.41
Sqstm1-201ENSMUST00000015981 Rprd2Q6NXI6 1469 aaKnown RBP23.82■■□□□ 1.4
Sqstm1-201ENSMUST00000015981 Lmtk2Q3TYD6 1471 aa23.79■■□□□ 1.4
Sqstm1-201ENSMUST00000015981 Pkd2O35245 966 aa23.77■■□□□ 1.4
Sqstm1-201ENSMUST00000015981 Unc13aQ4KUS2 1712 aa23.77■■□□□ 1.4
Sqstm1-201ENSMUST00000015981 SynmQ70IV5 1561 aa23.76■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Mug1P28665 1476 aa23.76■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Plekhg5Q66T02 1073 aa23.76■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 ChgaP26339 463 aaKnown RBP23.74■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Mink1Q9JM52 1308 aa23.74■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 4933416C03RikQ3V063 378 aa23.73■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Rfx7F8VPJ6 1459 aa23.71■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Polr1aO35134 1717 aaKnown RBP23.71■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 DaxxO35613 739 aa23.7■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Cwc22Q8C5N3 908 aaKnown RBP23.7■■□□□ 1.39
Sqstm1-201ENSMUST00000015981 Kank1E9Q238 1360 aa23.68■■□□□ 1.38
Sqstm1-201ENSMUST00000015981 Erbb3Q61526 1339 aa23.66■■□□□ 1.38
Sqstm1-201ENSMUST00000015981 Ercc6F8VPZ5 1481 aa23.66■■□□□ 1.38
Sqstm1-201ENSMUST00000015981 Ift140E9PY46 1464 aa23.64■■□□□ 1.38
Sqstm1-201ENSMUST00000015981 Myom3A2ABU4 1439 aa23.64■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Pik3c2gO70167 1506 aa23.63■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Zfp644E9QA22 1323 aa23.63■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Gcc2Q8CHG3 1679 aa23.62■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 NeflP08551 543 aa23.62■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Prkrip1Q9CWV6 186 aaKnown RBP23.62■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Cabp1Q9JLK7 227 aa23.61■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Duox2A2AQ99 1517 aa23.61■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Ipo4Q8VI75 1082 aa23.6■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 Dapk1Q80YE7 1442 aa23.59■■□□□ 1.37
Sqstm1-201ENSMUST00000015981 PogzQ8BZH4 1409 aaKnown RBP23.57■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Abca5Q8K448 1642 aa23.57■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 LrpprcQ6PB66 1392 aaKnown RBP23.57■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 NexmifQ5DTT1 1515 aa23.56■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Npm1Q61937 292 aaKnown RBP23.56■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Arhgef12Q8R4H2 1543 aaKnown RBP23.56■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 TnikP83510 1323 aa23.54■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Cux2P70298 1426 aa23.54■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Rundc1Q0VDN7 615 aa23.53■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Anp32bQ9EST5 272 aaKnown RBP23.52■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Mbd5B1AYB6 1498 aa23.52■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Nkx1-2P42580 305 aa23.52■■□□□ 1.36
Sqstm1-201ENSMUST00000015981 Naip6Q9JIB6 1403 aa23.52■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Kif21aQ9QXL2 1672 aa23.51■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Kif27Q7M6Z4 1394 aa23.51■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Ttll13A4Q9F6 804 aa23.51■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Rock2P70336 1388 aa23.5■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 CanxP35564 591 aaKnown RBP23.5■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Zfp444Q3TDV8 331 aaKnown RBP23.49■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Lamc1P02468 1607 aaKnown RBP23.49■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Pknox2Q8BG99 474 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Gpatch8A2A6A1 1505 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Samd9lQ69Z37 1561 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Abcc5Q9R1X5 1436 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Rgl3Q3UYI5 709 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 BC005561E9Q5E2 1589 aa23.48■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Card11Q8CIS0 1159 aa23.47■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Plekhh2Q8C115 1491 aa23.46■■□□□ 1.35
Sqstm1-201ENSMUST00000015981 Mug2P28666 1451 aa23.45■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Sart3Q9JLI8 962 aaKnown RBP23.44■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Rpgrip1lQ8CG73 1264 aa23.43■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Kif21bQ9QXL1 1668 aa23.42■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Mak16Q8BGS0 296 aaKnown RBP23.42■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Rad54l2Q99NG0 1466 aa23.41■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Kif14L0N7N1 1674 aaKnown RBP23.41■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Zscan21Q07231 555 aa23.41■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Dhx9O70133 1380 aaKnown RBP23.39■■□□□ 1.34
Sqstm1-201ENSMUST00000015981 Mre11Q61216 706 aa23.37■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 CadpsQ80TJ1 1355 aa23.37■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 B4galnt3Q6L8S8 986 aa23.36■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 Dnai1Q8C0M8 701 aa23.36■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 Dhx57Q6P5D3 1388 aaKnown RBP23.35■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 Map3k4O08648 1597 aa23.35■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 SphkapQ6NSW3 1687 aa23.34■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 Rad21Q61550 635 aaKnown RBP23.33■■□□□ 1.33
Sqstm1-201ENSMUST00000015981 Mtus2Q3UHD3 1353 aa23.33■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Mbd3Q9Z2D8 285 aaKnown RBP23.33■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 AlkP97793 1621 aa23.32■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 RalgapbQ8BQZ4 1484 aa23.3■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Kcnn1Q9EQR3 537 aa23.3■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Phldb1Q6PDH0 1371 aaKnown RBP23.3■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Arhgef40Q3UPH7 1517 aa23.3■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Kdm3bQ6ZPY7 1562 aa23.3■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 NudcO35685 332 aaKnown RBP23.29■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Cdk13Q69ZA1 1511 aaKnown RBP23.29■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Q7TT23 1179 aa23.28■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Grwd1Q810D6 446 aaKnown RBP23.28■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 EspnQ9ET47 871 aa23.28■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Il16O54824 1322 aa23.27■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Ak9G3UYQ4 1894 aa23.27■■□□□ 1.32
Sqstm1-201ENSMUST00000015981 Ppm1gQ61074 542 aa23.26■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Kdm2bQ6P1G2 1309 aa23.26■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Pdlim2Q8R1G6 349 aa23.26■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Kdm6bQ5NCY0 1641 aa23.26■■□□□ 1.31
Sqstm1-201ENSMUST00000015981 Adgrb2Q8CGM1 1561 aa23.25■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms